RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 MTUS2Q5JR59 1369 aa26.82■■□□□ 1.88
PPFIA1-202ENST00000389547 KANK4Q5T7N3 995 aaPredicted RBP26.81■■□□□ 1.88
PPFIA1-202ENST00000389547 CHIC2Q9UKJ5 165 aa26.78■■□□□ 1.88
PPFIA1-202ENST00000389547 CDK11AQ9UQ88 783 aaPredicted RBP26.78■■□□□ 1.88
PPFIA1-202ENST00000389547 IGF1RP08069 1367 aa26.76■■□□□ 1.87
PPFIA1-202ENST00000389547 VPS8Q8N3P4 1428 aa26.74■■□□□ 1.87
PPFIA1-202ENST00000389547 CUX1P39880 1505 aa26.69■■□□□ 1.86
PPFIA1-202ENST00000389547 POLR3GLQ9BT43 218 aa26.58■■□□□ 1.85
PPFIA1-202ENST00000389547 CLSPNQ9HAW4 1339 aa26.58■■□□□ 1.85
PPFIA1-202ENST00000389547 FKBP8Q14318 412 aa26.57■■□□□ 1.84
PPFIA1-202ENST00000389547 FHOD3Q2V2M9 1422 aa26.56■■□□□ 1.84
PPFIA1-202ENST00000389547 TOP2BQ02880 1626 aa26.56■■□□□ 1.84
PPFIA1-202ENST00000389547 CNGB1Q14028 1251 aaPredicted RBP26.54■■□□□ 1.84
PPFIA1-202ENST00000389547 AQRO60306 1485 aaKnown RBP eCLIP26.54■■□□□ 1.842e-6■■■■■ 27
PPFIA1-202ENST00000389547 RRP7BPQ9NSQ0 103 aa26.52■■□□□ 1.84
PPFIA1-202ENST00000389547 KCNH8Q96L42 1107 aa26.51■■□□□ 1.83
PPFIA1-202ENST00000389547 SUPT16HQ9Y5B9 1047 aaKnown RBP26.51■■□□□ 1.83
PPFIA1-202ENST00000389547 FHAD1B1AJZ9 1412 aa26.5■■□□□ 1.83
PPFIA1-202ENST00000389547 GAPVD1Q14C86 1478 aa26.5■■□□□ 1.83
PPFIA1-202ENST00000389547 TOPBP1Q92547 1522 aa26.49■■□□□ 1.83
PPFIA1-202ENST00000389547 POLA1P09884 1462 aaPredicted RBP26.47■■□□□ 1.83
PPFIA1-202ENST00000389547 ZNF326Q5BKZ1 582 aaKnown RBP26.46■■□□□ 1.83
PPFIA1-202ENST00000389547 PLEKHD1A6NEE1 506 aa26.44■■□□□ 1.82
PPFIA1-202ENST00000389547 CCNB3Q8WWL7 1395 aa26.39■■□□□ 1.81
PPFIA1-202ENST00000389547 RTL5Q5HYW3 569 aaPredicted RBP26.38■■□□□ 1.81
PPFIA1-202ENST00000389547 PRXQ9BXM0 1461 aa26.37■■□□□ 1.81
PPFIA1-202ENST00000389547 TSHZ2Q9NRE2 1034 aa26.35■■□□□ 1.81
PPFIA1-202ENST00000389547 JPH4Q96JJ6 628 aa26.34■■□□□ 1.81
PPFIA1-202ENST00000389547 NPM1P06748 294 aaKnown RBP eCLIP26.33■■□□□ 1.81
PPFIA1-202ENST00000389547 CFDP1Q9UEE9 299 aaPredicted RBP26.33■■□□□ 1.8
PPFIA1-202ENST00000389547 KIF21BO75037 1637 aa26.28■■□□□ 1.8
PPFIA1-202ENST00000389547 TSPY4P0CV99 314 aa26.27■■□□□ 1.8
PPFIA1-202ENST00000389547 TSPY10P0CW01 314 aa26.27■■□□□ 1.8
PPFIA1-202ENST00000389547 FMN1Q68DA7 1419 aa26.27■■□□□ 1.8
PPFIA1-202ENST00000389547 ARAP1Q96P48 1450 aa26.25■■□□□ 1.79
PPFIA1-202ENST00000389547 DNMBPQ6XZF7 1577 aa26.24■■□□□ 1.79
PPFIA1-202ENST00000389547 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.24■■□□□ 1.794e-7■■□□□ 14.4
PPFIA1-202ENST00000389547 LAMC3Q9Y6N6 1575 aa26.23■■□□□ 1.79
PPFIA1-202ENST00000389547 MRC2Q9UBG0 1479 aa26.23■■□□□ 1.79
PPFIA1-202ENST00000389547 URB2Q14146 1524 aaKnown RBP26.21■■□□□ 1.79
PPFIA1-202ENST00000389547 SIN3AQ96ST3 1273 aa26.19■■□□□ 1.78
PPFIA1-202ENST00000389547 HIRIP3Q9BW71 556 aaPredicted RBP26.19■■□□□ 1.78
PPFIA1-202ENST00000389547 ARHGAP35Q9NRY4 1499 aa26.17■■□□□ 1.78
PPFIA1-202ENST00000389547 TONSLQ96HA7 1378 aa26.17■■□□□ 1.78
PPFIA1-202ENST00000389547 ERICH3Q5RHP9 1530 aa26.16■■□□□ 1.78
PPFIA1-202ENST00000389547 CARMIL2Q6F5E8 1435 aa26.14■■□□□ 1.78
PPFIA1-202ENST00000389547 NBR1Q14596 966 aa26.12■■□□□ 1.77
PPFIA1-202ENST00000389547 SLC4A1APQ9BWU0 796 aaKnown RBP26.11■■□□□ 1.77
PPFIA1-202ENST00000389547 ABCA10Q8WWZ4 1543 aa26.1■■□□□ 1.77
PPFIA1-202ENST00000389547 GRIN2BQ13224 1484 aa26.09■■□□□ 1.77
PPFIA1-202ENST00000389547 BIVM-ERCC5R4GMW8 1640 aa26.06■■□□□ 1.76
PPFIA1-202ENST00000389547 RBM19Q9Y4C8 960 aaKnown RBP26.05■■□□□ 1.76
PPFIA1-202ENST00000389547 ANP32CO43423 234 aa26.01■■□□□ 1.75
PPFIA1-202ENST00000389547 EIF5BO60841 1220 aaKnown RBP26■■□□□ 1.75
PPFIA1-202ENST00000389547 IFT140Q96RY7 1462 aa26■■□□□ 1.75
PPFIA1-202ENST00000389547 RAB3GAP2Q9H2M9 1393 aa25.99■■□□□ 1.75
PPFIA1-202ENST00000389547 ZNF608Q9ULD9 1512 aaPredicted RBP25.99■■□□□ 1.75
PPFIA1-202ENST00000389547 DDX10Q13206 875 aaKnown RBP25.98■■□□□ 1.75
PPFIA1-202ENST00000389547 KDM2AQ9Y2K7 1162 aa25.96■■□□□ 1.75
PPFIA1-202ENST00000389547 IRX6P78412 446 aaPredicted RBP25.95■■□□□ 1.74
PPFIA1-202ENST00000389547 SETD5Q9C0A6 1442 aa25.94■■□□□ 1.74
PPFIA1-202ENST00000389547 SNAPC4Q5SXM2 1469 aa25.94■■□□□ 1.74
PPFIA1-202ENST00000389547 FOXD1Q16676 465 aa25.93■■□□□ 1.74
PPFIA1-202ENST00000389547 PHLDB1Q86UU1 1377 aa25.93■■□□□ 1.74
PPFIA1-202ENST00000389547 PTPRGP23470 1445 aa25.89■■□□□ 1.73
PPFIA1-202ENST00000389547 CHGAP10645 457 aaKnown RBP25.88■■□□□ 1.73
PPFIA1-202ENST00000389547 RGL3Q3MIN7 710 aa25.84■■□□□ 1.73
PPFIA1-202ENST00000389547 ZNF644Q9H582 1327 aaPredicted RBP25.83■■□□□ 1.73
PPFIA1-202ENST00000389547 HNRNPMP52272 730 aaKnown RBP eCLIP25.83■■□□□ 1.733e-8■■■■■ 30.9
PPFIA1-202ENST00000389547 LRRC9Q6ZRR7 1453 aa25.83■■□□□ 1.73
PPFIA1-202ENST00000389547 DEKP35659 375 aaKnown RBP25.82■■□□□ 1.72
PPFIA1-202ENST00000389547 PRKCSHP14314 528 aaPredicted RBP25.82■■□□□ 1.72
PPFIA1-202ENST00000389547 DAXXQ9UER7 740 aaPredicted RBP25.81■■□□□ 1.72
PPFIA1-202ENST00000389547 CASKIN1Q8WXD9 1431 aa25.81■■□□□ 1.72
PPFIA1-202ENST00000389547 RTN4Q9NQC3 1192 aaKnown RBP25.79■■□□□ 1.72
PPFIA1-202ENST00000389547 ANP32AP39687 249 aaKnown RBP25.77■■□□□ 1.72
PPFIA1-202ENST00000389547 SENP3Q9H4L4 574 aaPredicted RBP25.77■■□□□ 1.72
PPFIA1-202ENST00000389547 PLPPR3Q6T4P5 718 aa25.76■■□□□ 1.71
PPFIA1-202ENST00000389547 CCDC18Q5T9S5 1454 aa25.76■■□□□ 1.71
PPFIA1-202ENST00000389547 HNRNPUQ00839 825 aaKnown RBP eCLIP25.75■■□□□ 1.71
PPFIA1-202ENST00000389547 DHX57Q6P158 1386 aaKnown RBP25.72■■□□□ 1.71
PPFIA1-202ENST00000389547 OSCARQ8IYS5 282 aa25.72■■□□□ 1.71
PPFIA1-202ENST00000389547 KIF21AQ7Z4S6 1674 aa25.7■■□□□ 1.7
PPFIA1-202ENST00000389547 PRDM2Q13029 1718 aa25.69■■□□□ 1.7
PPFIA1-202ENST00000389547 PRG4Q92954 1404 aaPredicted RBP25.69■■□□□ 1.7
PPFIA1-202ENST00000389547 NPM2Q86SE8 214 aaKnown RBP25.68■■□□□ 1.7
PPFIA1-202ENST00000389547 MPHOSPH9Q99550 1183 aa25.67■■□□□ 1.7
PPFIA1-202ENST00000389547 FGD6Q6ZV73 1430 aa25.66■■□□□ 1.7
PPFIA1-202ENST00000389547 FYCO1Q9BQS8 1478 aa25.65■■□□□ 1.7
PPFIA1-202ENST00000389547 PKD2Q13563 968 aa25.64■■□□□ 1.7
PPFIA1-202ENST00000389547 CYB5RLQ6IPT4 315 aa25.64■■□□□ 1.7
PPFIA1-202ENST00000389547 EFCAB2Q5VUJ9 269 aa25.64■■□□□ 1.69
PPFIA1-202ENST00000389547 EFCAB5A4FU69 1503 aa25.64■■□□□ 1.69
PPFIA1-202ENST00000389547 NCOA2Q15596 1464 aa25.63■■□□□ 1.69
PPFIA1-202ENST00000389547 KIAA0586Q9BVV6 1533 aa25.63■■□□□ 1.69
PPFIA1-202ENST00000389547 CUL7Q14999 1698 aa25.61■■□□□ 1.69
PPFIA1-202ENST00000389547 EIF4G2P78344 907 aaKnown RBP eCLIP25.61■■□□□ 1.69
PPFIA1-202ENST00000389547 MYOM3Q5VTT5 1437 aa25.6■■□□□ 1.69
PPFIA1-202ENST00000389547 GRIN2AQ12879 1464 aa25.59■■□□□ 1.69
PPFIA1-202ENST00000389547 ZBTB47Q9UFB7 747 aaPredicted RBP25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms