RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 ARAP1Q96P48 1450 aa30.95■■■□□ 2.55
CCM2-202ENST00000381112 GRIN2AQ12879 1464 aa30.95■■■□□ 2.54
CCM2-202ENST00000381112 VPS8Q8N3P4 1428 aa30.94■■■□□ 2.54
CCM2-202ENST00000381112 CHMP7Q8WUX9 453 aaPredicted RBP30.89■■■□□ 2.54
CCM2-202ENST00000381112 EFCAB5A4FU69 1503 aa30.83■■■□□ 2.53
CCM2-202ENST00000381112 FBLN2P98095 1184 aa30.8■■■□□ 2.52
CCM2-202ENST00000381112 IQGAP2Q13576 1575 aa30.79■■■□□ 2.52
CCM2-202ENST00000381112 KIAA0586Q9BVV6 1533 aa30.79■■■□□ 2.52
CCM2-202ENST00000381112 NUP160Q12769 1436 aa30.76■■■□□ 2.51
CCM2-202ENST00000381112 SAMD9Q5K651 1589 aa30.73■■■□□ 2.51
CCM2-202ENST00000381112 CEP170Q5SW79 1584 aa30.73■■■□□ 2.51
CCM2-202ENST00000381112 P3H3Q8IVL6 736 aa30.72■■■□□ 2.51
CCM2-202ENST00000381112 FHOD3Q2V2M9 1422 aa30.7■■■□□ 2.51
CCM2-202ENST00000381112 UGGT2Q9NYU1 1516 aa30.68■■■□□ 2.5
CCM2-202ENST00000381112 PPARGC1BQ86YN6 1023 aaKnown RBP30.66■■■□□ 2.5
CCM2-202ENST00000381112 CHD1O14646 1710 aa30.58■■■□□ 2.49
CCM2-202ENST00000381112 APLP2Q06481 763 aa30.58■■■□□ 2.49
CCM2-202ENST00000381112 TRIM26Q12899 539 aaPredicted RBP30.58■■■□□ 2.49
CCM2-202ENST00000381112 FMN1Q68DA7 1419 aa30.57■■■□□ 2.48
CCM2-202ENST00000381112 DISP1Q96F81 1524 aa30.54■■■□□ 2.48
CCM2-202ENST00000381112 JPH4Q96JJ6 628 aa30.5■■■□□ 2.47
CCM2-202ENST00000381112 PCGF6Q9BYE7 350 aa30.5■■■□□ 2.47
CCM2-202ENST00000381112 CASKIN1Q8WXD9 1431 aa30.49■■■□□ 2.47
CCM2-202ENST00000381112 PCF11O94913 1555 aaKnown RBP30.49■■■□□ 2.47
CCM2-202ENST00000381112 KIAA0556O60303 1618 aa30.48■■■□□ 2.47
CCM2-202ENST00000381112 FYCO1Q9BQS8 1478 aa30.47■■■□□ 2.47
CCM2-202ENST00000381112 TTBK1Q5TCY1 1321 aaPredicted RBP30.43■■■□□ 2.46
CCM2-202ENST00000381112 MAP3K1Q13233 1512 aa30.43■■■□□ 2.46
CCM2-202ENST00000381112 CARMIL2Q6F5E8 1435 aa30.39■■■□□ 2.46
CCM2-202ENST00000381112 KANK4Q5T7N3 995 aaPredicted RBP30.38■■■□□ 2.45
CCM2-202ENST00000381112 TIAM1Q13009 1591 aa30.36■■■□□ 2.45
CCM2-202ENST00000381112 ATP1B4Q9UN42 357 aaPredicted RBP30.35■■■□□ 2.45
CCM2-202ENST00000381112 CLASP1Q7Z460 1538 aa30.32■■■□□ 2.44
CCM2-202ENST00000381112 PRG4Q92954 1404 aaPredicted RBP30.31■■■□□ 2.44
CCM2-202ENST00000381112 SHROOM2Q13796 1616 aa30.31■■■□□ 2.44
CCM2-202ENST00000381112 CFAP43Q8NDM7 1665 aa30.28■■■□□ 2.44
CCM2-202ENST00000381112 LRRC9Q6ZRR7 1453 aa30.25■■■□□ 2.43
CCM2-202ENST00000381112 HECW1Q76N89 1606 aa30.22■■■□□ 2.43
CCM2-202ENST00000381112 CCDC18Q5T9S5 1454 aa30.18■■■□□ 2.42
CCM2-202ENST00000381112 LRRIQ1Q96JM4 1722 aa30.17■■■□□ 2.42
CCM2-202ENST00000381112 EPRSP07814 1512 aaKnown RBP30.15■■■□□ 2.42
CCM2-202ENST00000381112 RAPGEF6Q8TEU7 1601 aa30.14■■■□□ 2.42
CCM2-202ENST00000381112 PLB1Q6P1J6 1458 aa30.14■■■□□ 2.41
CCM2-202ENST00000381112 NUP153P49790 1475 aaKnown RBP30.12■■■□□ 2.41
CCM2-202ENST00000381112 PTPRGP23470 1445 aa30.12■■■□□ 2.41
CCM2-202ENST00000381112 OSCARQ8IYS5 282 aa30.11■■■□□ 2.41
CCM2-202ENST00000381112 ERCC6L2Q5T890 1561 aa30.11■■■□□ 2.41
CCM2-202ENST00000381112 ABCA8O94911 1581 aa30.07■■■□□ 2.4
CCM2-202ENST00000381112 CDK13Q14004 1512 aaKnown RBP30.06■■■□□ 2.4
CCM2-202ENST00000381112 MTUS2Q5JR59 1369 aa30.06■■■□□ 2.4
CCM2-202ENST00000381112 ARID3CA6NKF2 412 aa30.02■■■□□ 2.4
CCM2-202ENST00000381112 MAGI3Q5TCQ9 1506 aa30.01■■■□□ 2.39
CCM2-202ENST00000381112 EHBP1L1Q8N3D4 1523 aa30■■■□□ 2.39
CCM2-202ENST00000381112 RRBP1Q9P2E9 1410 aaKnown RBP29.99■■■□□ 2.39
CCM2-202ENST00000381112 PHLDB1Q86UU1 1377 aa29.98■■■□□ 2.39
CCM2-202ENST00000381112 UACAQ9BZF9 1416 aa29.95■■■□□ 2.38
CCM2-202ENST00000381112 CCNB3Q8WWL7 1395 aa29.91■■■□□ 2.38
CCM2-202ENST00000381112 CDK11AQ9UQ88 783 aaPredicted RBP29.9■■■□□ 2.38
CCM2-202ENST00000381112 ATP10BO94823 1461 aa29.9■■■□□ 2.38
CCM2-202ENST00000381112 NCOA2Q15596 1464 aa29.9■■■□□ 2.38
CCM2-202ENST00000381112 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.89■■■□□ 2.37
CCM2-202ENST00000381112 HNRNPUL2Q1KMD3 747 aaKnown RBP29.89■■■□□ 2.37
CCM2-202ENST00000381112 ARHGEF11O15085 1522 aa29.87■■■□□ 2.37
CCM2-202ENST00000381112 SUPT6HQ7KZ85 1726 aaKnown RBP29.87■■■□□ 2.37
CCM2-202ENST00000381112 ABCC2Q92887 1545 aa29.84■■■□□ 2.37
CCM2-202ENST00000381112 TROQ12816 1431 aaPredicted RBP29.82■■■□□ 2.36
CCM2-202ENST00000381112 UHRF1BP1LA0JNW5 1464 aa29.8■■■□□ 2.36
CCM2-202ENST00000381112 MYOM3Q5VTT5 1437 aa29.78■■■□□ 2.36
CCM2-202ENST00000381112 FGD6Q6ZV73 1430 aa29.77■■■□□ 2.36
CCM2-202ENST00000381112 PLEKHD1A6NEE1 506 aa29.74■■■□□ 2.35
CCM2-202ENST00000381112 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.72■■■□□ 2.35
CCM2-202ENST00000381112 KDM5BQ9UGL1 1544 aa29.68■■■□□ 2.34
CCM2-202ENST00000381112 ADCY10Q96PN6 1610 aa29.68■■■□□ 2.34
CCM2-202ENST00000381112 FAM50AQ14320 339 aaKnown RBP29.68■■■□□ 2.34
CCM2-202ENST00000381112 MIA2Q96PC5 1412 aa29.64■■■□□ 2.33
CCM2-202ENST00000381112 KIF14Q15058 1648 aa29.63■■■□□ 2.33
CCM2-202ENST00000381112 ZCCHC11Q5TAX3 1644 aaKnown RBP29.6■■■□□ 2.33
CCM2-202ENST00000381112 TCOF1Q13428 1488 aaKnown RBP29.59■■■□□ 2.33
CCM2-202ENST00000381112 ITGAEP38570 1179 aa29.59■■■□□ 2.33
CCM2-202ENST00000381112 PTPN23Q9H3S7 1636 aa29.58■■■□□ 2.33
CCM2-202ENST00000381112 ABCC10Q5T3U5 1492 aa29.57■■■□□ 2.32
CCM2-202ENST00000381112 GPATCH8Q9UKJ3 1502 aaKnown RBP29.55■■■□□ 2.32
CCM2-202ENST00000381112 HRCP23327 699 aa29.51■■■□□ 2.31
CCM2-202ENST00000381112 ITSN2Q9NZM3 1697 aa29.47■■■□□ 2.31
CCM2-202ENST00000381112 CFDP1Q9UEE9 299 aaPredicted RBP29.47■■■□□ 2.31
CCM2-202ENST00000381112 PTPRKQ15262 1439 aa29.44■■■□□ 2.3
CCM2-202ENST00000381112 ZNF644Q9H582 1327 aaPredicted RBP29.42■■■□□ 2.3
CCM2-202ENST00000381112 RIMBP3CA6NJZ7 1639 aa29.41■■■□□ 2.3
CCM2-202ENST00000381112 RIMBP3BA6NNM3 1639 aa29.41■■■□□ 2.3
CCM2-202ENST00000381112 RIMBP3Q9UFD9 1639 aa29.41■■■□□ 2.3
CCM2-202ENST00000381112 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.41■■■□□ 2.3
CCM2-202ENST00000381112 CDC42BPAQ5VT25 1732 aa29.4■■■□□ 2.3
CCM2-202ENST00000381112 KCNH8Q96L42 1107 aa29.4■■■□□ 2.3
CCM2-202ENST00000381112 WDR7Q9Y4E6 1490 aa29.4■■■□□ 2.3
CCM2-202ENST00000381112 CAMSAP2Q08AD1 1489 aa29.38■■■□□ 2.29
CCM2-202ENST00000381112 TTC37Q6PGP7 1564 aa29.37■■■□□ 2.29
CCM2-202ENST00000381112 NPM1P06748 294 aaKnown RBP eCLIP29.37■■■□□ 2.29
CCM2-202ENST00000381112 CCER1Q8TC90 406 aaPredicted RBP29.37■■■□□ 2.29
CCM2-202ENST00000381112 ASXL2Q76L83 1435 aa29.35■■■□□ 2.29
CCM2-202ENST00000381112 SETD5Q9C0A6 1442 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms