RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 NISCHQ9Y2I1 1504 aa44.94■■■■■ 4.78
CCM2-202ENST00000381112 CCDC180Q9P1Z9 1646 aa39.21■■■■□ 3.87
CCM2-202ENST00000381112 ZCCHC6Q5VYS8 1495 aaKnown RBP37.72■■■■□ 3.63
CCM2-202ENST00000381112 ABCC9O60706 1549 aa37.25■■■■□ 3.55
CCM2-202ENST00000381112 DCAF1Q9Y4B6 1507 aa37.18■■■■□ 3.54
CCM2-202ENST00000381112 DCAF8L2P0C7V8 631 aa37.12■■■■□ 3.53
CCM2-202ENST00000381112 MYO15BQ96JP2 1530 aa36.81■■■■□ 3.48
CCM2-202ENST00000381112 NACADO15069 1562 aa36.6■■■■□ 3.45
CCM2-202ENST00000381112 SHROOM4Q9ULL8 1493 aa36.5■■■■□ 3.43
CCM2-202ENST00000381112 RB1CC1Q8TDY2 1594 aa36.3■■■■□ 3.4
CCM2-202ENST00000381112 SCRIBQ14160 1630 aa36.03■■■■□ 3.36
CCM2-202ENST00000381112 UNC13AQ9UPW8 1703 aa35.47■■■■□ 3.27
CCM2-202ENST00000381112 BICRAQ9NZM4 1560 aa35.24■■■■□ 3.23
CCM2-202ENST00000381112 PABPN1Q86U42 306 aaKnown RBP eCLIP35.12■■■■□ 3.21
CCM2-202ENST00000381112 SUPT5HO00267 1087 aaKnown RBP35.04■■■■□ 3.2
CCM2-202ENST00000381112 CECR2Q9BXF3 1484 aa34.94■■■■□ 3.18
CCM2-202ENST00000381112 RSF1Q96T23 1441 aaPredicted RBP34.82■■■■□ 3.16
CCM2-202ENST00000381112 MROH2BQ7Z745 1585 aa34.71■■■■□ 3.15
CCM2-202ENST00000381112 BAZ1AQ9NRL2 1556 aaPredicted RBP34.7■■■■□ 3.14
CCM2-202ENST00000381112 SMARCA4P51532 1647 aa34.55■■■■□ 3.12
CCM2-202ENST00000381112 WIZO95785 1651 aa34.36■■■■□ 3.09
CCM2-202ENST00000381112 EIF4G1Q04637 1599 aaKnown RBP34.17■■■■□ 3.06
CCM2-202ENST00000381112 PEG3Q9GZU2 1588 aa34.17■■■■□ 3.06
CCM2-202ENST00000381112 ATAD2BQ9ULI0 1458 aa34.07■■■■□ 3.04
CCM2-202ENST00000381112 TOP2AP11388 1531 aaKnown RBP34.05■■■■□ 3.04
CCM2-202ENST00000381112 SMARCA2P51531 1590 aa34.01■■■■□ 3.04
CCM2-202ENST00000381112 BAZ1BQ9UIG0 1483 aaKnown RBP33.84■■■■□ 3.01
CCM2-202ENST00000381112 NCAPD3P42695 1498 aa33.82■■■■□ 3
CCM2-202ENST00000381112 HMGXB3Q12766 1538 aa33.72■■■□□ 2.99
CCM2-202ENST00000381112 CCDC88BA6NC98 1476 aa33.71■■■□□ 2.99
CCM2-202ENST00000381112 CC2D2AQ9P2K1 1620 aa33.69■■■□□ 2.98
CCM2-202ENST00000381112 CHIC1Q5VXU3 224 aa33.5■■■□□ 2.95
CCM2-202ENST00000381112 DNAJC5BQ9UF47 199 aa33.05■■■□□ 2.88
CCM2-202ENST00000381112 CFTRP13569 1480 aa33.02■■■□□ 2.88
CCM2-202ENST00000381112 TRIM41Q8WV44 630 aa32.98■■■□□ 2.87
CCM2-202ENST00000381112 CADPSQ9ULU8 1353 aa32.93■■■□□ 2.86
CCM2-202ENST00000381112 ABCC8Q09428 1581 aa32.9■■■□□ 2.86
CCM2-202ENST00000381112 WRNQ14191 1432 aaPredicted RBP eCLIP32.76■■■□□ 2.83
CCM2-202ENST00000381112 PRDM2Q13029 1718 aa32.69■■■□□ 2.82
CCM2-202ENST00000381112 NESP48681 1621 aa32.66■■■□□ 2.82
CCM2-202ENST00000381112 LAMC3Q9Y6N6 1575 aa32.64■■■□□ 2.82
CCM2-202ENST00000381112 SYNJ1O43426 1573 aa32.6■■■□□ 2.81
CCM2-202ENST00000381112 FANCD2Q9BXW9 1451 aa32.55■■■□□ 2.8
CCM2-202ENST00000381112 TOP2BQ02880 1626 aa32.49■■■□□ 2.79
CCM2-202ENST00000381112 CUX1P39880 1505 aa32.46■■■□□ 2.79
CCM2-202ENST00000381112 BIVM-ERCC5R4GMW8 1640 aa32.44■■■□□ 2.78
CCM2-202ENST00000381112 PDS5BQ9NTI5 1447 aa32.43■■■□□ 2.78
CCM2-202ENST00000381112 FAM9AQ8IZU1 332 aaPredicted RBP32.35■■■□□ 2.77
CCM2-202ENST00000381112 CEP164Q9UPV0 1460 aa32.35■■■□□ 2.77
CCM2-202ENST00000381112 SOGA1O94964 1423 aa32.3■■■□□ 2.76
CCM2-202ENST00000381112 EEA1Q15075 1411 aa32.21■■■□□ 2.75
CCM2-202ENST00000381112 DNMBPQ6XZF7 1577 aa32.21■■■□□ 2.75
CCM2-202ENST00000381112 KIF21AQ7Z4S6 1674 aa32.2■■■□□ 2.74
CCM2-202ENST00000381112 LOC105371045A0A1W2PR82 267 aa32.19■■■□□ 2.74
CCM2-202ENST00000381112 RUSC2Q8N2Y8 1516 aa32.18■■■□□ 2.74
CCM2-202ENST00000381112 TOPBP1Q92547 1522 aa32.17■■■□□ 2.74
CCM2-202ENST00000381112 URB2Q14146 1524 aaKnown RBP32.16■■■□□ 2.74
CCM2-202ENST00000381112 FGD5Q6ZNL6 1462 aa32.13■■■□□ 2.73
CCM2-202ENST00000381112 CSRNP3Q8WYN3 585 aa32.06■■■□□ 2.72
CCM2-202ENST00000381112 POLA1P09884 1462 aaPredicted RBP32.01■■■□□ 2.72
CCM2-202ENST00000381112 MRC2Q9UBG0 1479 aa32.01■■■□□ 2.72
CCM2-202ENST00000381112 ERCC6Q03468 1493 aa31.95■■■□□ 2.71
CCM2-202ENST00000381112 KIF27Q86VH2 1401 aa31.95■■■□□ 2.7
CCM2-202ENST00000381112 CUX2O14529 1486 aa31.89■■■□□ 2.7
CCM2-202ENST00000381112 RAD54L2Q9Y4B4 1467 aa31.89■■■□□ 2.7
CCM2-202ENST00000381112 EHMT2Q96KQ7 1210 aa31.86■■■□□ 2.69
CCM2-202ENST00000381112 ABCA10Q8WWZ4 1543 aa31.85■■■□□ 2.69
CCM2-202ENST00000381112 WDR62O43379 1518 aa31.85■■■□□ 2.69
CCM2-202ENST00000381112 THOC2Q8NI27 1593 aaKnown RBP31.76■■■□□ 2.68
CCM2-202ENST00000381112 KIF21BO75037 1637 aa31.76■■■□□ 2.68
CCM2-202ENST00000381112 GOLGA3Q08378 1498 aa31.74■■■□□ 2.67
CCM2-202ENST00000381112 PRXQ9BXM0 1461 aa31.71■■■□□ 2.67
CCM2-202ENST00000381112 IGF1RP08069 1367 aa31.71■■■□□ 2.67
CCM2-202ENST00000381112 WDR97A6NE52 1622 aa31.7■■■□□ 2.67
CCM2-202ENST00000381112 TARBP1Q13395 1621 aaKnown RBP31.69■■■□□ 2.66
CCM2-202ENST00000381112 RAPGEF2Q9Y4G8 1499 aa31.65■■■□□ 2.66
CCM2-202ENST00000381112 TNIKQ9UKE5 1360 aa31.63■■■□□ 2.65
CCM2-202ENST00000381112 TDRD9Q8NDG6 1382 aaKnown RBP31.62■■■□□ 2.65
CCM2-202ENST00000381112 IFT140Q96RY7 1462 aa31.6■■■□□ 2.65
CCM2-202ENST00000381112 ERICH3Q5RHP9 1530 aa31.6■■■□□ 2.65
CCM2-202ENST00000381112 UBTFP17480 764 aaKnown RBP31.59■■■□□ 2.65
CCM2-202ENST00000381112 ABCA5Q8WWZ7 1642 aa31.58■■■□□ 2.65
CCM2-202ENST00000381112 GAPVD1Q14C86 1478 aa31.55■■■□□ 2.64
CCM2-202ENST00000381112 CARMIL1Q5VZK9 1371 aa31.53■■■□□ 2.64
CCM2-202ENST00000381112 AQRO60306 1485 aaKnown RBP eCLIP31.44■■■□□ 2.627e-7■■■■■ 33.7
CCM2-202ENST00000381112 CEP162Q5TB80 1403 aa31.43■■■□□ 2.62
CCM2-202ENST00000381112 ZNF608Q9ULD9 1512 aaPredicted RBP31.43■■■□□ 2.62
CCM2-202ENST00000381112 CUL7Q14999 1698 aa31.4■■■□□ 2.62
CCM2-202ENST00000381112 GRIN2BQ13224 1484 aa31.34■■■□□ 2.61
CCM2-202ENST00000381112 PBRM1Q86U86 1689 aa31.29■■■□□ 2.6
CCM2-202ENST00000381112 EIF4G3O43432 1585 aaKnown RBP31.28■■■□□ 2.6
CCM2-202ENST00000381112 CLIP1P30622 1438 aa31.23■■■□□ 2.59
CCM2-202ENST00000381112 FHAD1B1AJZ9 1412 aa31.22■■■□□ 2.59
CCM2-202ENST00000381112 ADAMTS12P58397 1594 aa31.18■■■□□ 2.58
CCM2-202ENST00000381112 SNAPC4Q5SXM2 1469 aa31.14■■■□□ 2.57
CCM2-202ENST00000381112 RANGAP1P46060 587 aaPredicted RBP31.1■■■□□ 2.57
CCM2-202ENST00000381112 MAGI1Q96QZ7 1491 aaPredicted RBP31.08■■■□□ 2.57
CCM2-202ENST00000381112 ARHGAP35Q9NRY4 1499 aa30.98■■■□□ 2.55
CCM2-202ENST00000381112 CTTNBP2Q8WZ74 1663 aa30.97■■■□□ 2.55
CCM2-202ENST00000381112 SYNJ2O15056 1496 aa30.97■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms