RNA–Protein interactions for RNA: ENST00000380568.7

GCOM1-201, Transcript of GRINL1A complex locus 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene GCOM1, Length 1,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-201ENST00000380568 MAGI1Q96QZ7 1491 aaPredicted RBP29.86■■■□□ 2.37
GCOM1-201ENST00000380568 PCGF6Q9BYE7 350 aa29.81■■■□□ 2.36
GCOM1-201ENST00000380568 SNAPC4Q5SXM2 1469 aa29.77■■■□□ 2.36
GCOM1-201ENST00000380568 APLP2Q06481 763 aa29.76■■■□□ 2.35
GCOM1-201ENST00000380568 RANGAP1P46060 587 aaPredicted RBP29.72■■■□□ 2.35
GCOM1-201ENST00000380568 SYNJ2O15056 1496 aa29.7■■■□□ 2.34
GCOM1-201ENST00000380568 SAMD9Q5K651 1589 aa29.69■■■□□ 2.34
GCOM1-201ENST00000380568 GRIN2AQ12879 1464 aa29.67■■■□□ 2.34
GCOM1-201ENST00000380568 IQGAP2Q13576 1575 aa29.67■■■□□ 2.34
GCOM1-201ENST00000380568 MAP3K1Q13233 1512 aa29.65■■■□□ 2.34
GCOM1-201ENST00000380568 KIAA0586Q9BVV6 1533 aa29.61■■■□□ 2.33
GCOM1-201ENST00000380568 FMN1Q68DA7 1419 aa29.61■■■□□ 2.33
GCOM1-201ENST00000380568 UGGT2Q9NYU1 1516 aa29.56■■■□□ 2.32
GCOM1-201ENST00000380568 FYCO1Q9BQS8 1478 aa29.54■■■□□ 2.32
GCOM1-201ENST00000380568 FHOD3Q2V2M9 1422 aa29.51■■■□□ 2.31
GCOM1-201ENST00000380568 CHMP7Q8WUX9 453 aaPredicted RBP29.5■■■□□ 2.31
GCOM1-201ENST00000380568 CASKIN1Q8WXD9 1431 aa29.5■■■□□ 2.31
GCOM1-201ENST00000380568 NUP160Q12769 1436 aa29.49■■■□□ 2.31
GCOM1-201ENST00000380568 PCF11O94913 1555 aaKnown RBP29.47■■■□□ 2.31
GCOM1-201ENST00000380568 PPARGC1BQ86YN6 1023 aaKnown RBP29.46■■■□□ 2.31
GCOM1-201ENST00000380568 TIAM1Q13009 1591 aa29.46■■■□□ 2.31
GCOM1-201ENST00000380568 CFAP43Q8NDM7 1665 aa29.43■■■□□ 2.3
GCOM1-201ENST00000380568 CEP170Q5SW79 1584 aa29.42■■■□□ 2.3
GCOM1-201ENST00000380568 P3H3Q8IVL6 736 aa29.35■■■□□ 2.29
GCOM1-201ENST00000380568 KIAA0556O60303 1618 aa29.35■■■□□ 2.29
GCOM1-201ENST00000380568 LRRC9Q6ZRR7 1453 aa29.3■■■□□ 2.28
GCOM1-201ENST00000380568 DISP1Q96F81 1524 aa29.29■■■□□ 2.28
GCOM1-201ENST00000380568 FBLN2P98095 1184 aa29.28■■■□□ 2.28
GCOM1-201ENST00000380568 HECW1Q76N89 1606 aa29.28■■■□□ 2.28
GCOM1-201ENST00000380568 CCDC18Q5T9S5 1454 aa29.28■■■□□ 2.28
GCOM1-201ENST00000380568 CARMIL2Q6F5E8 1435 aa29.27■■■□□ 2.28
GCOM1-201ENST00000380568 TTBK1Q5TCY1 1321 aaPredicted RBP29.24■■■□□ 2.27
GCOM1-201ENST00000380568 CHD1O14646 1710 aa29.23■■■□□ 2.27
GCOM1-201ENST00000380568 KANK4Q5T7N3 995 aaPredicted RBP29.23■■■□□ 2.27
GCOM1-201ENST00000380568 RRBP1Q9P2E9 1410 aaKnown RBP29.19■■■□□ 2.26
GCOM1-201ENST00000380568 HRCP23327 699 aa29.16■■■□□ 2.26
GCOM1-201ENST00000380568 JPH4Q96JJ6 628 aa29.15■■■□□ 2.26
GCOM1-201ENST00000380568 EHBP1L1Q8N3D4 1523 aa29.11■■■□□ 2.25
GCOM1-201ENST00000380568 ATP1B4Q9UN42 357 aaPredicted RBP29.1■■■□□ 2.25
GCOM1-201ENST00000380568 SHROOM2Q13796 1616 aa29.08■■■□□ 2.25
GCOM1-201ENST00000380568 RAPGEF6Q8TEU7 1601 aa29.08■■■□□ 2.25
GCOM1-201ENST00000380568 LRRIQ1Q96JM4 1722 aa29.08■■■□□ 2.24
GCOM1-201ENST00000380568 EPRSP07814 1512 aaKnown RBP29.06■■■□□ 2.24
GCOM1-201ENST00000380568 MTUS2Q5JR59 1369 aa29.06■■■□□ 2.24
GCOM1-201ENST00000380568 CCNB3Q8WWL7 1395 aa29.04■■■□□ 2.24
GCOM1-201ENST00000380568 ZEB1P37275 1124 aaPredicted RBP29.02■■■□□ 2.24
GCOM1-201ENST00000380568 SUPT6HQ7KZ85 1726 aaKnown RBP29■■■□□ 2.23
GCOM1-201ENST00000380568 CLASP1Q7Z460 1538 aa28.98■■■□□ 2.23
GCOM1-201ENST00000380568 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.98■■■□□ 2.23
GCOM1-201ENST00000380568 PRG4Q92954 1404 aaPredicted RBP28.97■■■□□ 2.23
GCOM1-201ENST00000380568 NUP153P49790 1475 aaKnown RBP28.95■■■□□ 2.23
GCOM1-201ENST00000380568 PHLDB1Q86UU1 1377 aa28.93■■■□□ 2.22
GCOM1-201ENST00000380568 ABCA8O94911 1581 aa28.92■■■□□ 2.22
GCOM1-201ENST00000380568 ARHGEF11O15085 1522 aa28.91■■■□□ 2.22
GCOM1-201ENST00000380568 CDK11AQ9UQ88 783 aaPredicted RBP28.9■■■□□ 2.22
GCOM1-201ENST00000380568 NCOA2Q15596 1464 aa28.89■■■□□ 2.22
GCOM1-201ENST00000380568 CDK13Q14004 1512 aaKnown RBP28.88■■■□□ 2.21
GCOM1-201ENST00000380568 PTPRGP23470 1445 aa28.85■■■□□ 2.21
GCOM1-201ENST00000380568 PLB1Q6P1J6 1458 aa28.85■■■□□ 2.21
GCOM1-201ENST00000380568 MAGI3Q5TCQ9 1506 aa28.84■■■□□ 2.21
GCOM1-201ENST00000380568 MYOM3Q5VTT5 1437 aa28.84■■■□□ 2.21
GCOM1-201ENST00000380568 FGD6Q6ZV73 1430 aa28.83■■■□□ 2.21
GCOM1-201ENST00000380568 HNRNPUL2Q1KMD3 747 aaKnown RBP28.8■■■□□ 2.2
GCOM1-201ENST00000380568 TROQ12816 1431 aaPredicted RBP28.76■■■□□ 2.2
GCOM1-201ENST00000380568 MIA2Q96PC5 1412 aa28.76■■■□□ 2.19
GCOM1-201ENST00000380568 ADCY10Q96PN6 1610 aa28.74■■■□□ 2.19
GCOM1-201ENST00000380568 UACAQ9BZF9 1416 aa28.73■■■□□ 2.19
GCOM1-201ENST00000380568 CCER1Q8TC90 406 aaPredicted RBP28.71■■■□□ 2.19
GCOM1-201ENST00000380568 TCOF1Q13428 1488 aaKnown RBP28.69■■■□□ 2.18
GCOM1-201ENST00000380568 ABCC2Q92887 1545 aa28.67■■■□□ 2.18
GCOM1-201ENST00000380568 ATP10BO94823 1461 aa28.66■■■□□ 2.18
GCOM1-201ENST00000380568 PTPN23Q9H3S7 1636 aa28.66■■■□□ 2.18
GCOM1-201ENST00000380568 UHRF1BP1LA0JNW5 1464 aa28.65■■■□□ 2.18
GCOM1-201ENST00000380568 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.64■■■□□ 2.18
GCOM1-201ENST00000380568 FAM50AQ14320 339 aaKnown RBP28.64■■■□□ 2.18
GCOM1-201ENST00000380568 ITSN2Q9NZM3 1697 aa28.63■■■□□ 2.17
GCOM1-201ENST00000380568 ERCC6L2Q5T890 1561 aa28.61■■■□□ 2.17
GCOM1-201ENST00000380568 KIF14Q15058 1648 aa28.6■■■□□ 2.17
GCOM1-201ENST00000380568 PLEKHD1A6NEE1 506 aa28.59■■■□□ 2.17
GCOM1-201ENST00000380568 CLSPNQ9HAW4 1339 aa28.58■■■□□ 2.17
GCOM1-201ENST00000380568 OSCARQ8IYS5 282 aa28.58■■■□□ 2.17
GCOM1-201ENST00000380568 ARID3CA6NKF2 412 aa28.55■■■□□ 2.16
GCOM1-201ENST00000380568 SETD5Q9C0A6 1442 aa28.53■■■□□ 2.16
GCOM1-201ENST00000380568 AKNAQ7Z591 1439 aa28.49■■■□□ 2.15
GCOM1-201ENST00000380568 KDM5BQ9UGL1 1544 aa28.48■■■□□ 2.15
GCOM1-201ENST00000380568 ITGAEP38570 1179 aa28.48■■■□□ 2.15
GCOM1-201ENST00000380568 ABCC10Q5T3U5 1492 aa28.46■■■□□ 2.15
GCOM1-201ENST00000380568 GPATCH8Q9UKJ3 1502 aaKnown RBP28.45■■■□□ 2.14
GCOM1-201ENST00000380568 HFM1A2PYH4 1435 aa28.44■■■□□ 2.14
GCOM1-201ENST00000380568 RAB3GAP2Q9H2M9 1393 aa28.44■■■□□ 2.14
GCOM1-201ENST00000380568 ACIN1Q9UKV3 1341 aaKnown RBP28.42■■■□□ 2.14
GCOM1-201ENST00000380568 DNMT1P26358 1616 aaKnown RBP28.4■■■□□ 2.14
GCOM1-201ENST00000380568 DHX57Q6P158 1386 aaKnown RBP28.4■■■□□ 2.14
GCOM1-201ENST00000380568 ZCCHC11Q5TAX3 1644 aaKnown RBP28.39■■■□□ 2.14
GCOM1-201ENST00000380568 CFDP1Q9UEE9 299 aaPredicted RBP28.37■■■□□ 2.13
GCOM1-201ENST00000380568 CDC42BPAQ5VT25 1732 aa28.36■■■□□ 2.13
GCOM1-201ENST00000380568 CAMSAP2Q08AD1 1489 aa28.35■■■□□ 2.13
GCOM1-201ENST00000380568 PTPRKQ15262 1439 aa28.34■■■□□ 2.13
GCOM1-201ENST00000380568 ROCK1Q13464 1354 aa28.34■■■□□ 2.13
GCOM1-201ENST00000380568 GCC2Q8IWJ2 1684 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms