RNA–Protein interactions for RNA: ENST00000380568.7

GCOM1-201, Transcript of GRINL1A complex locus 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene GCOM1, Length 1,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-201ENST00000380568 NISCHQ9Y2I1 1504 aa43.25■■■■■ 4.51
GCOM1-201ENST00000380568 CCDC180Q9P1Z9 1646 aa37.84■■■■□ 3.65
GCOM1-201ENST00000380568 ZCCHC6Q5VYS8 1495 aaKnown RBP36.39■■■■□ 3.42
GCOM1-201ENST00000380568 DCAF1Q9Y4B6 1507 aa35.96■■■■□ 3.35
GCOM1-201ENST00000380568 MYO15BQ96JP2 1530 aa35.56■■■■□ 3.28
GCOM1-201ENST00000380568 DCAF8L2P0C7V8 631 aa35.36■■■■□ 3.25
GCOM1-201ENST00000380568 ABCC9O60706 1549 aa35.35■■■■□ 3.25
GCOM1-201ENST00000380568 NACADO15069 1562 aa35.19■■■■□ 3.22
GCOM1-201ENST00000380568 SHROOM4Q9ULL8 1493 aa34.99■■■■□ 3.19
GCOM1-201ENST00000380568 RB1CC1Q8TDY2 1594 aa34.83■■■■□ 3.17
GCOM1-201ENST00000380568 SCRIBQ14160 1630 aa34.52■■■■□ 3.12
GCOM1-201ENST00000380568 UNC13AQ9UPW8 1703 aa33.94■■■■□ 3.02
GCOM1-201ENST00000380568 SUPT5HO00267 1087 aaKnown RBP33.76■■■■□ 3
GCOM1-201ENST00000380568 BICRAQ9NZM4 1560 aa33.62■■■□□ 2.97
GCOM1-201ENST00000380568 RSF1Q96T23 1441 aaPredicted RBP33.51■■■□□ 2.96
GCOM1-201ENST00000380568 BAZ1AQ9NRL2 1556 aaPredicted RBP33.47■■■□□ 2.95
GCOM1-201ENST00000380568 CECR2Q9BXF3 1484 aa33.42■■■□□ 2.94
GCOM1-201ENST00000380568 MROH2BQ7Z745 1585 aa33.3■■■□□ 2.92
GCOM1-201ENST00000380568 PABPN1Q86U42 306 aaKnown RBP eCLIP33.23■■■□□ 2.91
GCOM1-201ENST00000380568 SMARCA4P51532 1647 aa33.23■■■□□ 2.91
GCOM1-201ENST00000380568 WIZO95785 1651 aa33.01■■■□□ 2.87
GCOM1-201ENST00000380568 PEG3Q9GZU2 1588 aa32.93■■■□□ 2.86
GCOM1-201ENST00000380568 TOP2AP11388 1531 aaKnown RBP32.85■■■□□ 2.85
GCOM1-201ENST00000380568 SMARCA2P51531 1590 aa32.75■■■□□ 2.83
GCOM1-201ENST00000380568 EIF4G1Q04637 1599 aaKnown RBP32.64■■■□□ 2.82
GCOM1-201ENST00000380568 ATAD2BQ9ULI0 1458 aa32.64■■■□□ 2.82
GCOM1-201ENST00000380568 CHIC1Q5VXU3 224 aa32.48■■■□□ 2.79
GCOM1-201ENST00000380568 BAZ1BQ9UIG0 1483 aaKnown RBP32.48■■■□□ 2.79
GCOM1-201ENST00000380568 HMGXB3Q12766 1538 aa32.45■■■□□ 2.78
GCOM1-201ENST00000380568 NCAPD3P42695 1498 aa32.41■■■□□ 2.78
GCOM1-201ENST00000380568 CCDC88BA6NC98 1476 aa32.38■■■□□ 2.77
GCOM1-201ENST00000380568 CC2D2AQ9P2K1 1620 aa32.09■■■□□ 2.73
GCOM1-201ENST00000380568 TRIM41Q8WV44 630 aa31.9■■■□□ 2.7
GCOM1-201ENST00000380568 CFTRP13569 1480 aa31.7■■■□□ 2.66
GCOM1-201ENST00000380568 ABCC8Q09428 1581 aa31.64■■■□□ 2.66
GCOM1-201ENST00000380568 PRDM2Q13029 1718 aa31.62■■■□□ 2.65
GCOM1-201ENST00000380568 WRNQ14191 1432 aaPredicted RBP eCLIP31.6■■■□□ 2.65
GCOM1-201ENST00000380568 CADPSQ9ULU8 1353 aa31.54■■■□□ 2.64
GCOM1-201ENST00000380568 EEA1Q15075 1411 aa31.39■■■□□ 2.62
GCOM1-201ENST00000380568 SYNJ1O43426 1573 aa31.38■■■□□ 2.61
GCOM1-201ENST00000380568 TOP2BQ02880 1626 aa31.38■■■□□ 2.61
GCOM1-201ENST00000380568 BIVM-ERCC5R4GMW8 1640 aa31.36■■■□□ 2.61
GCOM1-201ENST00000380568 LAMC3Q9Y6N6 1575 aa31.34■■■□□ 2.61
GCOM1-201ENST00000380568 FANCD2Q9BXW9 1451 aa31.16■■■□□ 2.58
GCOM1-201ENST00000380568 CUX1P39880 1505 aa31.16■■■□□ 2.58
GCOM1-201ENST00000380568 FAM9AQ8IZU1 332 aaPredicted RBP31.08■■■□□ 2.57
GCOM1-201ENST00000380568 SOGA1O94964 1423 aa31.07■■■□□ 2.57
GCOM1-201ENST00000380568 PDS5BQ9NTI5 1447 aa31.07■■■□□ 2.56
GCOM1-201ENST00000380568 LOC105371045A0A1W2PR82 267 aa31.05■■■□□ 2.56
GCOM1-201ENST00000380568 NESP48681 1621 aa31.02■■■□□ 2.56
GCOM1-201ENST00000380568 CEP164Q9UPV0 1460 aa31.01■■■□□ 2.55
GCOM1-201ENST00000380568 DNMBPQ6XZF7 1577 aa30.98■■■□□ 2.55
GCOM1-201ENST00000380568 CSRNP3Q8WYN3 585 aa30.96■■■□□ 2.55
GCOM1-201ENST00000380568 DNAJC5BQ9UF47 199 aa30.88■■■□□ 2.53
GCOM1-201ENST00000380568 RUSC2Q8N2Y8 1516 aa30.88■■■□□ 2.53
GCOM1-201ENST00000380568 KIF21BO75037 1637 aa30.87■■■□□ 2.53
GCOM1-201ENST00000380568 KIF27Q86VH2 1401 aa30.84■■■□□ 2.53
GCOM1-201ENST00000380568 TOPBP1Q92547 1522 aa30.84■■■□□ 2.53
GCOM1-201ENST00000380568 FGD5Q6ZNL6 1462 aa30.83■■■□□ 2.53
GCOM1-201ENST00000380568 GOLGA3Q08378 1498 aa30.82■■■□□ 2.52
GCOM1-201ENST00000380568 KIF21AQ7Z4S6 1674 aa30.76■■■□□ 2.51
GCOM1-201ENST00000380568 TNIKQ9UKE5 1360 aa30.73■■■□□ 2.51
GCOM1-201ENST00000380568 URB2Q14146 1524 aaKnown RBP30.71■■■□□ 2.51
GCOM1-201ENST00000380568 ERICH3Q5RHP9 1530 aa30.69■■■□□ 2.5
GCOM1-201ENST00000380568 POLA1P09884 1462 aaPredicted RBP30.68■■■□□ 2.5
GCOM1-201ENST00000380568 ABCA10Q8WWZ4 1543 aa30.66■■■□□ 2.5
GCOM1-201ENST00000380568 CUX2O14529 1486 aa30.64■■■□□ 2.5
GCOM1-201ENST00000380568 PRXQ9BXM0 1461 aa30.63■■■□□ 2.49
GCOM1-201ENST00000380568 MRC2Q9UBG0 1479 aa30.63■■■□□ 2.49
GCOM1-201ENST00000380568 WDR97A6NE52 1622 aa30.53■■■□□ 2.48
GCOM1-201ENST00000380568 UBTFP17480 764 aaKnown RBP30.5■■■□□ 2.47
GCOM1-201ENST00000380568 CEP162Q5TB80 1403 aa30.49■■■□□ 2.47
GCOM1-201ENST00000380568 RAPGEF2Q9Y4G8 1499 aa30.49■■■□□ 2.47
GCOM1-201ENST00000380568 WDR62O43379 1518 aa30.48■■■□□ 2.47
GCOM1-201ENST00000380568 EHMT2Q96KQ7 1210 aa30.47■■■□□ 2.47
GCOM1-201ENST00000380568 RAD54L2Q9Y4B4 1467 aa30.45■■■□□ 2.47
GCOM1-201ENST00000380568 IGF1RP08069 1367 aa30.44■■■□□ 2.46
GCOM1-201ENST00000380568 ERCC6Q03468 1493 aa30.42■■■□□ 2.46
GCOM1-201ENST00000380568 CUL7Q14999 1698 aa30.39■■■□□ 2.46
GCOM1-201ENST00000380568 ABCA5Q8WWZ7 1642 aa30.38■■■□□ 2.45
GCOM1-201ENST00000380568 TARBP1Q13395 1621 aaKnown RBP30.37■■■□□ 2.45
GCOM1-201ENST00000380568 CARMIL1Q5VZK9 1371 aa30.33■■■□□ 2.45
GCOM1-201ENST00000380568 THOC2Q8NI27 1593 aaKnown RBP30.31■■■□□ 2.44
GCOM1-201ENST00000380568 IFT140Q96RY7 1462 aa30.3■■■□□ 2.44
GCOM1-201ENST00000380568 GAPVD1Q14C86 1478 aa30.27■■■□□ 2.44
GCOM1-201ENST00000380568 CLIP1P30622 1438 aa30.26■■■□□ 2.43
GCOM1-201ENST00000380568 TDRD9Q8NDG6 1382 aaKnown RBP30.15■■■□□ 2.42
GCOM1-201ENST00000380568 PBRM1Q86U86 1689 aa30.1■■■□□ 2.41
GCOM1-201ENST00000380568 GRIN2BQ13224 1484 aa30.08■■■□□ 2.41
GCOM1-201ENST00000380568 VPS8Q8N3P4 1428 aa30.06■■■□□ 2.4
GCOM1-201ENST00000380568 FHAD1B1AJZ9 1412 aa30.01■■■□□ 2.39
GCOM1-201ENST00000380568 TRIM26Q12899 539 aaPredicted RBP30■■■□□ 2.39
GCOM1-201ENST00000380568 CTTNBP2Q8WZ74 1663 aa29.99■■■□□ 2.39
GCOM1-201ENST00000380568 ADAMTS12P58397 1594 aa29.98■■■□□ 2.39
GCOM1-201ENST00000380568 AQRO60306 1485 aaKnown RBP eCLIP29.95■■■□□ 2.38
GCOM1-201ENST00000380568 EIF4G3O43432 1585 aaKnown RBP29.94■■■□□ 2.38
GCOM1-201ENST00000380568 EFCAB5A4FU69 1503 aa29.92■■■□□ 2.38
GCOM1-201ENST00000380568 ZNF608Q9ULD9 1512 aaPredicted RBP29.91■■■□□ 2.38
GCOM1-201ENST00000380568 ARAP1Q96P48 1450 aa29.91■■■□□ 2.38
GCOM1-201ENST00000380568 ARHGAP35Q9NRY4 1499 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms