RNA–Protein interactions for RNA: ENST00000380535.8

TNFSF13-203, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-203ENST00000380535 EIF4G3O43432 1585 aaKnown RBP21.49■■□□□ 1.03
TNFSF13-203ENST00000380535 EFCAB5A4FU69 1503 aa21.49■■□□□ 1.03
TNFSF13-203ENST00000380535 AQRO60306 1485 aaKnown RBP eCLIP21.49■■□□□ 1.03
TNFSF13-203ENST00000380535 ARAP1Q96P48 1450 aa21.46■■□□□ 1.03
TNFSF13-203ENST00000380535 ARHGAP35Q9NRY4 1499 aa21.45■■□□□ 1.03
TNFSF13-203ENST00000380535 ZNF608Q9ULD9 1512 aaPredicted RBP21.45■■□□□ 1.02
TNFSF13-203ENST00000380535 MAGI1Q96QZ7 1491 aaPredicted RBP21.43■■□□□ 1.02
TNFSF13-203ENST00000380535 APLP2Q06481 763 aa21.38■■□□□ 1.01
TNFSF13-203ENST00000380535 SNAPC4Q5SXM2 1469 aa21.35■■□□□ 1.01
TNFSF13-203ENST00000380535 RANGAP1P46060 587 aaPredicted RBP21.34■■□□□ 1.01
TNFSF13-203ENST00000380535 SAMD9Q5K651 1589 aa21.32■■□□□ 1
TNFSF13-203ENST00000380535 PRKCSHP14314 528 aaPredicted RBP21.32■■□□□ 1
TNFSF13-203ENST00000380535 SYNJ2O15056 1496 aa21.31■■□□□ 1
TNFSF13-203ENST00000380535 MAP3K1Q13233 1512 aa21.31■■□□□ 1
TNFSF13-203ENST00000380535 IQGAP2Q13576 1575 aa21.3■■□□□ 1
TNFSF13-203ENST00000380535 GRIN2AQ12879 1464 aa21.29■■□□□ 1
TNFSF13-203ENST00000380535 PPARGC1BQ86YN6 1023 aaKnown RBP21.27■■□□□ 1
TNFSF13-203ENST00000380535 FMN1Q68DA7 1419 aa21.26■□□□□ 0.99
TNFSF13-203ENST00000380535 KIAA0586Q9BVV6 1533 aa21.25■□□□□ 0.99
TNFSF13-203ENST00000380535 UGGT2Q9NYU1 1516 aa21.22■□□□□ 0.99
TNFSF13-203ENST00000380535 ERICH6Q7L0X2 663 aa21.22■□□□□ 0.99
TNFSF13-203ENST00000380535 FYCO1Q9BQS8 1478 aa21.22■□□□□ 0.99
TNFSF13-203ENST00000380535 CASKIN1Q8WXD9 1431 aa21.18■□□□□ 0.98
TNFSF13-203ENST00000380535 CHMP7Q8WUX9 453 aaPredicted RBP21.17■□□□□ 0.98
TNFSF13-203ENST00000380535 FHOD3Q2V2M9 1422 aa21.17■□□□□ 0.98
TNFSF13-203ENST00000380535 PCF11O94913 1555 aaKnown RBP21.16■□□□□ 0.98
TNFSF13-203ENST00000380535 TIAM1Q13009 1591 aa21.16■□□□□ 0.98
TNFSF13-203ENST00000380535 CFAP43Q8NDM7 1665 aa21.16■□□□□ 0.98
TNFSF13-203ENST00000380535 NUP160Q12769 1436 aa21.15■□□□□ 0.98
TNFSF13-203ENST00000380535 CEP170Q5SW79 1584 aa21.11■□□□□ 0.97
TNFSF13-203ENST00000380535 KIAA0556O60303 1618 aa21.07■□□□□ 0.96
TNFSF13-203ENST00000380535 P3H3Q8IVL6 736 aa21.07■□□□□ 0.96
TNFSF13-203ENST00000380535 LRRC9Q6ZRR7 1453 aa21.03■□□□□ 0.96
TNFSF13-203ENST00000380535 HECW1Q76N89 1606 aa21.03■□□□□ 0.96
TNFSF13-203ENST00000380535 CCDC18Q5T9S5 1454 aa21.02■□□□□ 0.96
TNFSF13-203ENST00000380535 CARMIL2Q6F5E8 1435 aa21.02■□□□□ 0.95
TNFSF13-203ENST00000380535 CHD1O14646 1710 aa21.01■□□□□ 0.95
TNFSF13-203ENST00000380535 DISP1Q96F81 1524 aa21.01■□□□□ 0.95
TNFSF13-203ENST00000380535 FBLN2P98095 1184 aa21■□□□□ 0.95
TNFSF13-203ENST00000380535 DAXXQ9UER7 740 aaPredicted RBP20.99■□□□□ 0.95
TNFSF13-203ENST00000380535 KANK4Q5T7N3 995 aaPredicted RBP20.97■□□□□ 0.95
TNFSF13-203ENST00000380535 RRBP1Q9P2E9 1410 aaKnown RBP20.95■□□□□ 0.94
TNFSF13-203ENST00000380535 ZEB1P37275 1124 aaPredicted RBP20.93■□□□□ 0.94
TNFSF13-203ENST00000380535 JPH4Q96JJ6 628 aa20.92■□□□□ 0.94
TNFSF13-203ENST00000380535 LRRIQ1Q96JM4 1722 aa20.91■□□□□ 0.94
TNFSF13-203ENST00000380535 ATP1B4Q9UN42 357 aaPredicted RBP20.91■□□□□ 0.94
TNFSF13-203ENST00000380535 EHBP1L1Q8N3D4 1523 aa20.91■□□□□ 0.94
TNFSF13-203ENST00000380535 RAPGEF6Q8TEU7 1601 aa20.9■□□□□ 0.94
TNFSF13-203ENST00000380535 SHROOM2Q13796 1616 aa20.89■□□□□ 0.93
TNFSF13-203ENST00000380535 EPRSP07814 1512 aaKnown RBP20.86■□□□□ 0.93
TNFSF13-203ENST00000380535 MTUS2Q5JR59 1369 aa20.86■□□□□ 0.93
TNFSF13-203ENST00000380535 SUPT6HQ7KZ85 1726 aaKnown RBP20.85■□□□□ 0.93
TNFSF13-203ENST00000380535 CCNB3Q8WWL7 1395 aa20.85■□□□□ 0.93
TNFSF13-203ENST00000380535 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.81■□□□□ 0.92
TNFSF13-203ENST00000380535 CLASP1Q7Z460 1538 aa20.8■□□□□ 0.92
TNFSF13-203ENST00000380535 PRG4Q92954 1404 aaPredicted RBP20.79■□□□□ 0.92
TNFSF13-203ENST00000380535 NUP153P49790 1475 aaKnown RBP20.77■□□□□ 0.92
TNFSF13-203ENST00000380535 CDK11AQ9UQ88 783 aaPredicted RBP20.76■□□□□ 0.91
TNFSF13-203ENST00000380535 ABCA8O94911 1581 aa20.76■□□□□ 0.91
TNFSF13-203ENST00000380535 PHLDB1Q86UU1 1377 aa20.75■□□□□ 0.91
TNFSF13-203ENST00000380535 ARHGEF11O15085 1522 aa20.75■□□□□ 0.91
TNFSF13-203ENST00000380535 NCOA2Q15596 1464 aa20.74■□□□□ 0.91
TNFSF13-203ENST00000380535 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.73■□□□□ 0.91
TNFSF13-203ENST00000380535 CDK13Q14004 1512 aaKnown RBP20.72■□□□□ 0.91
TNFSF13-203ENST00000380535 PTPRGP23470 1445 aa20.7■□□□□ 0.9
TNFSF13-203ENST00000380535 MYOM3Q5VTT5 1437 aa20.7■□□□□ 0.9
TNFSF13-203ENST00000380535 MAGI3Q5TCQ9 1506 aa20.7■□□□□ 0.9
TNFSF13-203ENST00000380535 CCER1Q8TC90 406 aaPredicted RBP20.69■□□□□ 0.9
TNFSF13-203ENST00000380535 FGD6Q6ZV73 1430 aa20.69■□□□□ 0.9
TNFSF13-203ENST00000380535 PLB1Q6P1J6 1458 aa20.69■□□□□ 0.9
TNFSF13-203ENST00000380535 HNRNPUL2Q1KMD3 747 aaKnown RBP20.69■□□□□ 0.9
TNFSF13-203ENST00000380535 ADCY10Q96PN6 1610 aa20.66■□□□□ 0.9
TNFSF13-203ENST00000380535 MIA2Q96PC5 1412 aa20.64■□□□□ 0.9
TNFSF13-203ENST00000380535 TROQ12816 1431 aaPredicted RBP20.64■□□□□ 0.89
TNFSF13-203ENST00000380535 UACAQ9BZF9 1416 aa20.61■□□□□ 0.89
TNFSF13-203ENST00000380535 TCOF1Q13428 1488 aaKnown RBP20.6■□□□□ 0.89
TNFSF13-203ENST00000380535 PTPN23Q9H3S7 1636 aa20.6■□□□□ 0.89
TNFSF13-203ENST00000380535 ITSN2Q9NZM3 1697 aa20.59■□□□□ 0.89
TNFSF13-203ENST00000380535 FAM50AQ14320 339 aaKnown RBP20.58■□□□□ 0.88
TNFSF13-203ENST00000380535 ABCC2Q92887 1545 aa20.57■□□□□ 0.88
TNFSF13-203ENST00000380535 ATP10BO94823 1461 aa20.57■□□□□ 0.88
TNFSF13-203ENST00000380535 UHRF1BP1LA0JNW5 1464 aa20.56■□□□□ 0.88
TNFSF13-203ENST00000380535 KIF14Q15058 1648 aa20.55■□□□□ 0.88
TNFSF13-203ENST00000380535 PLEKHD1A6NEE1 506 aa20.53■□□□□ 0.88
TNFSF13-203ENST00000380535 CLSPNQ9HAW4 1339 aa20.53■□□□□ 0.88
TNFSF13-203ENST00000380535 ERCC6L2Q5T890 1561 aa20.52■□□□□ 0.88
TNFSF13-203ENST00000380535 OSCARQ8IYS5 282 aa20.51■□□□□ 0.87
TNFSF13-203ENST00000380535 SETD5Q9C0A6 1442 aa20.5■□□□□ 0.87
TNFSF13-203ENST00000380535 ARID3CA6NKF2 412 aa20.47■□□□□ 0.87
TNFSF13-203ENST00000380535 ITGAEP38570 1179 aa20.45■□□□□ 0.86
TNFSF13-203ENST00000380535 AKNAQ7Z591 1439 aa20.45■□□□□ 0.86
TNFSF13-203ENST00000380535 ACIN1Q9UKV3 1341 aaKnown RBP20.45■□□□□ 0.86
TNFSF13-203ENST00000380535 KDM5BQ9UGL1 1544 aa20.43■□□□□ 0.86
TNFSF13-203ENST00000380535 ABCC10Q5T3U5 1492 aa20.43■□□□□ 0.86
TNFSF13-203ENST00000380535 GPATCH8Q9UKJ3 1502 aaKnown RBP20.42■□□□□ 0.86
TNFSF13-203ENST00000380535 HFM1A2PYH4 1435 aa20.41■□□□□ 0.86
TNFSF13-203ENST00000380535 RAB3GAP2Q9H2M9 1393 aa20.41■□□□□ 0.86
TNFSF13-203ENST00000380535 DNMT1P26358 1616 aaKnown RBP20.41■□□□□ 0.86
TNFSF13-203ENST00000380535 CDC42BPAQ5VT25 1732 aa20.4■□□□□ 0.86
TNFSF13-203ENST00000380535 ZCCHC11Q5TAX3 1644 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms