RNA–Protein interactions for RNA: ENST00000380535.8

TNFSF13-203, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-203ENST00000380535 NISCHQ9Y2I1 1504 aa31.04■■■□□ 2.56
TNFSF13-203ENST00000380535 CCDC180Q9P1Z9 1646 aa27.19■■□□□ 1.94
TNFSF13-203ENST00000380535 ZCCHC6Q5VYS8 1495 aaKnown RBP26.11■■□□□ 1.77
TNFSF13-203ENST00000380535 DCAF1Q9Y4B6 1507 aa25.82■■□□□ 1.72
TNFSF13-203ENST00000380535 MYO15BQ96JP2 1530 aa25.52■■□□□ 1.68
TNFSF13-203ENST00000380535 DCAF8L2P0C7V8 631 aa25.38■■□□□ 1.65
TNFSF13-203ENST00000380535 ABCC9O60706 1549 aa25.35■■□□□ 1.65
TNFSF13-203ENST00000380535 NACADO15069 1562 aa25.27■■□□□ 1.64
TNFSF13-203ENST00000380535 SHROOM4Q9ULL8 1493 aa25.1■■□□□ 1.61
TNFSF13-203ENST00000380535 RB1CC1Q8TDY2 1594 aa25.01■■□□□ 1.59
TNFSF13-203ENST00000380535 SCRIBQ14160 1630 aa24.79■■□□□ 1.56
TNFSF13-203ENST00000380535 UNC13AQ9UPW8 1703 aa24.42■■□□□ 1.5
TNFSF13-203ENST00000380535 SUPT5HO00267 1087 aaKnown RBP24.23■■□□□ 1.47
TNFSF13-203ENST00000380535 BICRAQ9NZM4 1560 aa24.13■■□□□ 1.45
TNFSF13-203ENST00000380535 RSF1Q96T23 1441 aaPredicted RBP24.04■■□□□ 1.44
TNFSF13-203ENST00000380535 BAZ1AQ9NRL2 1556 aaPredicted RBP24.03■■□□□ 1.44
TNFSF13-203ENST00000380535 CECR2Q9BXF3 1484 aa23.96■■□□□ 1.43
TNFSF13-203ENST00000380535 MROH2BQ7Z745 1585 aa23.89■■□□□ 1.42
TNFSF13-203ENST00000380535 SMARCA4P51532 1647 aa23.86■■□□□ 1.41
TNFSF13-203ENST00000380535 PABPN1Q86U42 306 aaKnown RBP eCLIP23.83■■□□□ 1.41
TNFSF13-203ENST00000380535 WIZO95785 1651 aa23.71■■□□□ 1.39
TNFSF13-203ENST00000380535 PEG3Q9GZU2 1588 aa23.64■■□□□ 1.38
TNFSF13-203ENST00000380535 TOP2AP11388 1531 aaKnown RBP23.58■■□□□ 1.37
TNFSF13-203ENST00000380535 SMARCA2P51531 1590 aa23.51■■□□□ 1.35
TNFSF13-203ENST00000380535 EIF4G1Q04637 1599 aaKnown RBP23.43■■□□□ 1.34
TNFSF13-203ENST00000380535 ATAD2BQ9ULI0 1458 aa23.41■■□□□ 1.34
TNFSF13-203ENST00000380535 CHIC1Q5VXU3 224 aa23.32■■□□□ 1.32
TNFSF13-203ENST00000380535 BAZ1BQ9UIG0 1483 aaKnown RBP23.31■■□□□ 1.32
TNFSF13-203ENST00000380535 HMGXB3Q12766 1538 aa23.29■■□□□ 1.32
TNFSF13-203ENST00000380535 NCAPD3P42695 1498 aa23.25■■□□□ 1.31
TNFSF13-203ENST00000380535 CCDC88BA6NC98 1476 aa23.25■■□□□ 1.31
TNFSF13-203ENST00000380535 CC2D2AQ9P2K1 1620 aa23.04■■□□□ 1.28
TNFSF13-203ENST00000380535 TRIM41Q8WV44 630 aa22.91■■□□□ 1.26
TNFSF13-203ENST00000380535 PRDM2Q13029 1718 aa22.76■■□□□ 1.23
TNFSF13-203ENST00000380535 CFTRP13569 1480 aa22.74■■□□□ 1.23
TNFSF13-203ENST00000380535 ABCC8Q09428 1581 aa22.71■■□□□ 1.23
TNFSF13-203ENST00000380535 WRNQ14191 1432 aaPredicted RBP eCLIP22.67■■□□□ 1.22
TNFSF13-203ENST00000380535 MYT1Q01538 1121 aa22.65■■□□□ 1.22
TNFSF13-203ENST00000380535 CADPSQ9ULU8 1353 aa22.62■■□□□ 1.21
TNFSF13-203ENST00000380535 PELP1Q8IZL8 1130 aaKnown RBP22.6■■□□□ 1.21
TNFSF13-203ENST00000380535 EEA1Q15075 1411 aa22.54■■□□□ 1.2
TNFSF13-203ENST00000380535 BIVM-ERCC5R4GMW8 1640 aa22.54■■□□□ 1.2
TNFSF13-203ENST00000380535 TOP2BQ02880 1626 aa22.53■■□□□ 1.2
TNFSF13-203ENST00000380535 SYNJ1O43426 1573 aa22.53■■□□□ 1.2
TNFSF13-203ENST00000380535 LAMC3Q9Y6N6 1575 aa22.51■■□□□ 1.19
TNFSF13-203ENST00000380535 LOC105371045A0A1W2PR82 267 aa22.36■■□□□ 1.17
TNFSF13-203ENST00000380535 CUX1P39880 1505 aa22.36■■□□□ 1.17
TNFSF13-203ENST00000380535 FANCD2Q9BXW9 1451 aa22.36■■□□□ 1.17
TNFSF13-203ENST00000380535 FAM9AQ8IZU1 332 aaPredicted RBP22.31■■□□□ 1.16
TNFSF13-203ENST00000380535 PDS5BQ9NTI5 1447 aa22.3■■□□□ 1.16
TNFSF13-203ENST00000380535 SOGA1O94964 1423 aa22.29■■□□□ 1.16
TNFSF13-203ENST00000380535 CEP164Q9UPV0 1460 aa22.25■■□□□ 1.15
TNFSF13-203ENST00000380535 NESP48681 1621 aa22.25■■□□□ 1.15
TNFSF13-203ENST00000380535 DNMBPQ6XZF7 1577 aa22.25■■□□□ 1.15
TNFSF13-203ENST00000380535 CSRNP3Q8WYN3 585 aa22.23■■□□□ 1.15
TNFSF13-203ENST00000380535 SLC24A1O60721 1099 aa22.23■■□□□ 1.15
TNFSF13-203ENST00000380535 KIF21BO75037 1637 aa22.18■■□□□ 1.14
TNFSF13-203ENST00000380535 TTBK1Q5TCY1 1321 aaPredicted RBP22.16■■□□□ 1.14
TNFSF13-203ENST00000380535 RUSC2Q8N2Y8 1516 aa22.16■■□□□ 1.14
TNFSF13-203ENST00000380535 KIF27Q86VH2 1401 aa22.14■■□□□ 1.13
TNFSF13-203ENST00000380535 GOLGA3Q08378 1498 aa22.13■■□□□ 1.13
TNFSF13-203ENST00000380535 DNAJC5BQ9UF47 199 aa22.13■■□□□ 1.13
TNFSF13-203ENST00000380535 TOPBP1Q92547 1522 aa22.13■■□□□ 1.13
TNFSF13-203ENST00000380535 FGD5Q6ZNL6 1462 aa22.12■■□□□ 1.13
TNFSF13-203ENST00000380535 KIF21AQ7Z4S6 1674 aa22.11■■□□□ 1.13
TNFSF13-203ENST00000380535 TNIKQ9UKE5 1360 aa22.07■■□□□ 1.12
TNFSF13-203ENST00000380535 ERICH3Q5RHP9 1530 aa22.04■■□□□ 1.12
TNFSF13-203ENST00000380535 URB2Q14146 1524 aaKnown RBP22.03■■□□□ 1.12
TNFSF13-203ENST00000380535 POLA1P09884 1462 aaPredicted RBP22■■□□□ 1.11
TNFSF13-203ENST00000380535 ABCA10Q8WWZ4 1543 aa22■■□□□ 1.11
TNFSF13-203ENST00000380535 CUX2O14529 1486 aa21.99■■□□□ 1.11
TNFSF13-203ENST00000380535 PRXQ9BXM0 1461 aa21.98■■□□□ 1.11
TNFSF13-203ENST00000380535 MRC2Q9UBG0 1479 aa21.98■■□□□ 1.11
TNFSF13-203ENST00000380535 WDR97A6NE52 1622 aa21.93■■□□□ 1.1
TNFSF13-203ENST00000380535 UBTFP17480 764 aaKnown RBP21.91■■□□□ 1.1
TNFSF13-203ENST00000380535 CEP162Q5TB80 1403 aa21.89■■□□□ 1.09
TNFSF13-203ENST00000380535 RAPGEF2Q9Y4G8 1499 aa21.88■■□□□ 1.09
TNFSF13-203ENST00000380535 EHMT2Q96KQ7 1210 aa21.87■■□□□ 1.09
TNFSF13-203ENST00000380535 WDR62O43379 1518 aa21.87■■□□□ 1.09
TNFSF13-203ENST00000380535 RAD54L2Q9Y4B4 1467 aa21.85■■□□□ 1.09
TNFSF13-203ENST00000380535 IGF1RP08069 1367 aa21.85■■□□□ 1.09
TNFSF13-203ENST00000380535 CUL7Q14999 1698 aa21.84■■□□□ 1.09
TNFSF13-203ENST00000380535 ERCC6Q03468 1493 aa21.82■■□□□ 1.08
TNFSF13-203ENST00000380535 ABCA5Q8WWZ7 1642 aa21.81■■□□□ 1.08
TNFSF13-203ENST00000380535 TARBP1Q13395 1621 aaKnown RBP21.81■■□□□ 1.08
TNFSF13-203ENST00000380535 CARMIL1Q5VZK9 1371 aa21.77■■□□□ 1.08
TNFSF13-203ENST00000380535 THOC2Q8NI27 1593 aaKnown RBP21.75■■□□□ 1.07
TNFSF13-203ENST00000380535 IFT140Q96RY7 1462 aa21.75■■□□□ 1.07
TNFSF13-203ENST00000380535 GAPVD1Q14C86 1478 aa21.73■■□□□ 1.07
TNFSF13-203ENST00000380535 PCGF6Q9BYE7 350 aa21.72■■□□□ 1.07
TNFSF13-203ENST00000380535 CLIP1P30622 1438 aa21.72■■□□□ 1.07
TNFSF13-203ENST00000380535 HRCP23327 699 aa21.68■■□□□ 1.06
TNFSF13-203ENST00000380535 PBRM1Q86U86 1689 aa21.65■■□□□ 1.06
TNFSF13-203ENST00000380535 TDRD9Q8NDG6 1382 aaKnown RBP21.62■■□□□ 1.05
TNFSF13-203ENST00000380535 TRIM26Q12899 539 aaPredicted RBP21.62■■□□□ 1.05
TNFSF13-203ENST00000380535 GRIN2BQ13224 1484 aa21.58■■□□□ 1.05
TNFSF13-203ENST00000380535 CTTNBP2Q8WZ74 1663 aa21.57■■□□□ 1.04
TNFSF13-203ENST00000380535 VPS8Q8N3P4 1428 aa21.57■■□□□ 1.04
TNFSF13-203ENST00000380535 FHAD1B1AJZ9 1412 aa21.54■■□□□ 1.04
TNFSF13-203ENST00000380535 ADAMTS12P58397 1594 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 167.1 ms