RNA–Protein interactions for RNA: ENST00000379162.8

PDK3-201, Transcript of pyruvate dehydrogenase kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDK3, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK3-201ENST00000379162 VPS8Q8N3P4 1428 aa33.97■■■■□ 3.03
PDK3-201ENST00000379162 PPARGC1BQ86YN6 1023 aaKnown RBP33.95■■■■□ 3.03
PDK3-201ENST00000379162 GRIN2AQ12879 1464 aa33.9■■■■□ 3.02
PDK3-201ENST00000379162 SYNJ2O15056 1496 aa33.88■■■■□ 3.01
PDK3-201ENST00000379162 P3H3Q8IVL6 736 aa33.81■■■■□ 3
PDK3-201ENST00000379162 CHMP7Q8WUX9 453 aaPredicted RBP33.8■■■■□ 3
PDK3-201ENST00000379162 FBLN2P98095 1184 aa33.79■■■■□ 3
PDK3-201ENST00000379162 IQGAP2Q13576 1575 aa33.77■■■■□ 3
PDK3-201ENST00000379162 EFCAB5A4FU69 1503 aa33.77■■■■□ 3
PDK3-201ENST00000379162 FHOD3Q2V2M9 1422 aa33.75■■■□□ 2.99
PDK3-201ENST00000379162 CEP170Q5SW79 1584 aa33.75■■■□□ 2.99
PDK3-201ENST00000379162 SAMD9Q5K651 1589 aa33.74■■■□□ 2.99
PDK3-201ENST00000379162 PCGF6Q9BYE7 350 aa33.72■■■□□ 2.99
PDK3-201ENST00000379162 TTBK1Q5TCY1 1321 aaPredicted RBP33.7■■■□□ 2.99
PDK3-201ENST00000379162 KIAA0586Q9BVV6 1533 aa33.69■■■□□ 2.98
PDK3-201ENST00000379162 NUP160Q12769 1436 aa33.65■■■□□ 2.98
PDK3-201ENST00000379162 TRIM26Q12899 539 aaPredicted RBP33.65■■■□□ 2.98
PDK3-201ENST00000379162 CHD1O14646 1710 aa33.63■■■□□ 2.97
PDK3-201ENST00000379162 UGGT2Q9NYU1 1516 aa33.6■■■□□ 2.97
PDK3-201ENST00000379162 PCF11O94913 1555 aaKnown RBP33.57■■■□□ 2.96
PDK3-201ENST00000379162 APLP2Q06481 763 aa33.51■■■□□ 2.96
PDK3-201ENST00000379162 DISP1Q96F81 1524 aa33.5■■■□□ 2.95
PDK3-201ENST00000379162 KIAA0556O60303 1618 aa33.46■■■□□ 2.95
PDK3-201ENST00000379162 FMN1Q68DA7 1419 aa33.45■■■□□ 2.95
PDK3-201ENST00000379162 KANK4Q5T7N3 995 aaPredicted RBP33.44■■■□□ 2.94
PDK3-201ENST00000379162 CASKIN1Q8WXD9 1431 aa33.42■■■□□ 2.94
PDK3-201ENST00000379162 FYCO1Q9BQS8 1478 aa33.41■■■□□ 2.94
PDK3-201ENST00000379162 JPH4Q96JJ6 628 aa33.38■■■□□ 2.93
PDK3-201ENST00000379162 TIAM1Q13009 1591 aa33.38■■■□□ 2.93
PDK3-201ENST00000379162 ATP1B4Q9UN42 357 aaPredicted RBP33.37■■■□□ 2.93
PDK3-201ENST00000379162 CFAP43Q8NDM7 1665 aa33.32■■■□□ 2.92
PDK3-201ENST00000379162 LRRIQ1Q96JM4 1722 aa33.32■■■□□ 2.92
PDK3-201ENST00000379162 MAP3K1Q13233 1512 aa33.31■■■□□ 2.92
PDK3-201ENST00000379162 LRRC9Q6ZRR7 1453 aa33.21■■■□□ 2.91
PDK3-201ENST00000379162 CARMIL2Q6F5E8 1435 aa33.21■■■□□ 2.91
PDK3-201ENST00000379162 SHROOM2Q13796 1616 aa33.21■■■□□ 2.91
PDK3-201ENST00000379162 CLASP1Q7Z460 1538 aa33.21■■■□□ 2.91
PDK3-201ENST00000379162 PRG4Q92954 1404 aaPredicted RBP33.2■■■□□ 2.91
PDK3-201ENST00000379162 HECW1Q76N89 1606 aa33.16■■■□□ 2.9
PDK3-201ENST00000379162 ERCC6L2Q5T890 1561 aa33.12■■■□□ 2.89
PDK3-201ENST00000379162 RAPGEF6Q8TEU7 1601 aa33.1■■■□□ 2.89
PDK3-201ENST00000379162 PLB1Q6P1J6 1458 aa33.09■■■□□ 2.89
PDK3-201ENST00000379162 ARID3CA6NKF2 412 aa33.09■■■□□ 2.89
PDK3-201ENST00000379162 CDK13Q14004 1512 aaKnown RBP33.08■■■□□ 2.89
PDK3-201ENST00000379162 EPRSP07814 1512 aaKnown RBP33.08■■■□□ 2.89
PDK3-201ENST00000379162 NUP153P49790 1475 aaKnown RBP33.06■■■□□ 2.88
PDK3-201ENST00000379162 CCDC18Q5T9S5 1454 aa33.04■■■□□ 2.88
PDK3-201ENST00000379162 MAGI3Q5TCQ9 1506 aa33.04■■■□□ 2.88
PDK3-201ENST00000379162 ABCA8O94911 1581 aa32.98■■■□□ 2.87
PDK3-201ENST00000379162 PHLDB1Q86UU1 1377 aa32.97■■■□□ 2.87
PDK3-201ENST00000379162 MTUS2Q5JR59 1369 aa32.97■■■□□ 2.87
PDK3-201ENST00000379162 PTPRGP23470 1445 aa32.95■■■□□ 2.87
PDK3-201ENST00000379162 RRBP1Q9P2E9 1410 aaKnown RBP32.93■■■□□ 2.86
PDK3-201ENST00000379162 EHBP1L1Q8N3D4 1523 aa32.91■■■□□ 2.86
PDK3-201ENST00000379162 OSCARQ8IYS5 282 aa32.85■■■□□ 2.85
PDK3-201ENST00000379162 NCOA2Q15596 1464 aa32.83■■■□□ 2.85
PDK3-201ENST00000379162 CCNB3Q8WWL7 1395 aa32.83■■■□□ 2.85
PDK3-201ENST00000379162 HNRNPUL2Q1KMD3 747 aaKnown RBP32.83■■■□□ 2.85
PDK3-201ENST00000379162 SUPT6HQ7KZ85 1726 aaKnown RBP32.83■■■□□ 2.85
PDK3-201ENST00000379162 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.8■■■□□ 2.84
PDK3-201ENST00000379162 ARHGEF11O15085 1522 aa32.78■■■□□ 2.84
PDK3-201ENST00000379162 ATP10BO94823 1461 aa32.77■■■□□ 2.84
PDK3-201ENST00000379162 UACAQ9BZF9 1416 aa32.77■■■□□ 2.84
PDK3-201ENST00000379162 ABCC2Q92887 1545 aa32.69■■■□□ 2.82
PDK3-201ENST00000379162 FGD6Q6ZV73 1430 aa32.68■■■□□ 2.82
PDK3-201ENST00000379162 MYOM3Q5VTT5 1437 aa32.67■■■□□ 2.82
PDK3-201ENST00000379162 TROQ12816 1431 aaPredicted RBP32.67■■■□□ 2.82
PDK3-201ENST00000379162 CDK11AQ9UQ88 783 aaPredicted RBP32.65■■■□□ 2.82
PDK3-201ENST00000379162 FAM50AQ14320 339 aaKnown RBP32.63■■■□□ 2.81
PDK3-201ENST00000379162 KIF14Q15058 1648 aa32.62■■■□□ 2.81
PDK3-201ENST00000379162 ITGAEP38570 1179 aa32.62■■■□□ 2.81
PDK3-201ENST00000379162 HRCP23327 699 aa32.61■■■□□ 2.81
PDK3-201ENST00000379162 ADCY10Q96PN6 1610 aa32.57■■■□□ 2.8
PDK3-201ENST00000379162 UHRF1BP1LA0JNW5 1464 aa32.56■■■□□ 2.8
PDK3-201ENST00000379162 PLEKHD1A6NEE1 506 aa32.54■■■□□ 2.8
PDK3-201ENST00000379162 PTPN23Q9H3S7 1636 aa32.53■■■□□ 2.8
PDK3-201ENST00000379162 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.51■■■□□ 2.79
PDK3-201ENST00000379162 ZCCHC11Q5TAX3 1644 aaKnown RBP32.51■■■□□ 2.79
PDK3-201ENST00000379162 KDM5BQ9UGL1 1544 aa32.47■■■□□ 2.79
PDK3-201ENST00000379162 TCOF1Q13428 1488 aaKnown RBP32.45■■■□□ 2.79
PDK3-201ENST00000379162 ABCC10Q5T3U5 1492 aa32.44■■■□□ 2.78
PDK3-201ENST00000379162 MIA2Q96PC5 1412 aa32.43■■■□□ 2.78
PDK3-201ENST00000379162 GPATCH8Q9UKJ3 1502 aaKnown RBP32.42■■■□□ 2.78
PDK3-201ENST00000379162 PTPRKQ15262 1439 aa32.4■■■□□ 2.78
PDK3-201ENST00000379162 ZNF644Q9H582 1327 aaPredicted RBP32.36■■■□□ 2.77
PDK3-201ENST00000379162 CDC42BPAQ5VT25 1732 aa32.36■■■□□ 2.77
PDK3-201ENST00000379162 CCER1Q8TC90 406 aaPredicted RBP32.36■■■□□ 2.77
PDK3-201ENST00000379162 ITSN2Q9NZM3 1697 aa32.36■■■□□ 2.77
PDK3-201ENST00000379162 TTC37Q6PGP7 1564 aa32.3■■■□□ 2.76
PDK3-201ENST00000379162 CFDP1Q9UEE9 299 aaPredicted RBP32.29■■■□□ 2.76
PDK3-201ENST00000379162 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.28■■■□□ 2.76
PDK3-201ENST00000379162 KCNH8Q96L42 1107 aa32.26■■■□□ 2.76
PDK3-201ENST00000379162 CAMSAP2Q08AD1 1489 aa32.26■■■□□ 2.75
PDK3-201ENST00000379162 RIMBP3CA6NJZ7 1639 aa32.25■■■□□ 2.75
PDK3-201ENST00000379162 RIMBP3BA6NNM3 1639 aa32.25■■■□□ 2.75
PDK3-201ENST00000379162 RIMBP3Q9UFD9 1639 aa32.25■■■□□ 2.75
PDK3-201ENST00000379162 RAB3GAP2Q9H2M9 1393 aa32.24■■■□□ 2.75
PDK3-201ENST00000379162 SETD5Q9C0A6 1442 aa32.22■■■□□ 2.75
PDK3-201ENST00000379162 ZNF777Q9ULD5 760 aaPredicted RBP32.22■■■□□ 2.75
PDK3-201ENST00000379162 CDC42BPBQ9Y5S2 1711 aa32.21■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms