RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 ADAMTS12P58397 1594 aa27.1■■□□□ 1.93
THUMPD2-201ENST00000378727 FHAD1B1AJZ9 1412 aa27.08■■□□□ 1.93
THUMPD2-201ENST00000378727 SNAPC4Q5SXM2 1469 aa26.98■■□□□ 1.91
THUMPD2-201ENST00000378727 TTBK1Q5TCY1 1321 aaPredicted RBP26.96■■□□□ 1.91
THUMPD2-201ENST00000378727 EFCAB5A4FU69 1503 aa26.94■■□□□ 1.9
THUMPD2-201ENST00000378727 MAGI1Q96QZ7 1491 aaPredicted RBP26.89■■□□□ 1.9
THUMPD2-201ENST00000378727 APLP2Q06481 763 aa26.89■■□□□ 1.89
THUMPD2-201ENST00000378727 P3H3Q8IVL6 736 aa26.86■■□□□ 1.89
THUMPD2-201ENST00000378727 SAMD9Q5K651 1589 aa26.86■■□□□ 1.89
THUMPD2-201ENST00000378727 FHOD3Q2V2M9 1422 aa26.86■■□□□ 1.89
THUMPD2-201ENST00000378727 GRIN2AQ12879 1464 aa26.84■■□□□ 1.89
THUMPD2-201ENST00000378727 IQGAP2Q13576 1575 aa26.82■■□□□ 1.88
THUMPD2-201ENST00000378727 SYNJ2O15056 1496 aa26.8■■□□□ 1.88
THUMPD2-201ENST00000378727 PCF11O94913 1555 aaKnown RBP26.77■■□□□ 1.88
THUMPD2-201ENST00000378727 KANK4Q5T7N3 995 aaPredicted RBP26.74■■□□□ 1.87
THUMPD2-201ENST00000378727 KIAA0586Q9BVV6 1533 aa26.73■■□□□ 1.87
THUMPD2-201ENST00000378727 CHMP7Q8WUX9 453 aaPredicted RBP26.72■■□□□ 1.87
THUMPD2-201ENST00000378727 MAP3K1Q13233 1512 aa26.71■■□□□ 1.87
THUMPD2-201ENST00000378727 TIAM1Q13009 1591 aa26.7■■□□□ 1.86
THUMPD2-201ENST00000378727 CEP170Q5SW79 1584 aa26.7■■□□□ 1.86
THUMPD2-201ENST00000378727 UGGT2Q9NYU1 1516 aa26.69■■□□□ 1.86
THUMPD2-201ENST00000378727 FMN1Q68DA7 1419 aa26.69■■□□□ 1.86
THUMPD2-201ENST00000378727 CASKIN1Q8WXD9 1431 aa26.68■■□□□ 1.86
THUMPD2-201ENST00000378727 FYCO1Q9BQS8 1478 aa26.68■■□□□ 1.86
THUMPD2-201ENST00000378727 HRCP23327 699 aa26.66■■□□□ 1.86
THUMPD2-201ENST00000378727 FBLN2P98095 1184 aa26.65■■□□□ 1.86
THUMPD2-201ENST00000378727 CFAP43Q8NDM7 1665 aa26.64■■□□□ 1.85
THUMPD2-201ENST00000378727 NUP160Q12769 1436 aa26.63■■□□□ 1.85
THUMPD2-201ENST00000378727 DISP1Q96F81 1524 aa26.58■■□□□ 1.84
THUMPD2-201ENST00000378727 LRRC9Q6ZRR7 1453 aa26.57■■□□□ 1.84
THUMPD2-201ENST00000378727 ATP1B4Q9UN42 357 aaPredicted RBP26.56■■□□□ 1.84
THUMPD2-201ENST00000378727 KIAA0556O60303 1618 aa26.55■■□□□ 1.84
THUMPD2-201ENST00000378727 LRRIQ1Q96JM4 1722 aa26.54■■□□□ 1.84
THUMPD2-201ENST00000378727 CHD1O14646 1710 aa26.51■■□□□ 1.84
THUMPD2-201ENST00000378727 RRBP1Q9P2E9 1410 aaKnown RBP26.44■■□□□ 1.82
THUMPD2-201ENST00000378727 JPH4Q96JJ6 628 aa26.43■■□□□ 1.82
THUMPD2-201ENST00000378727 HECW1Q76N89 1606 aa26.42■■□□□ 1.82
THUMPD2-201ENST00000378727 HNRNPUL2Q1KMD3 747 aaKnown RBP26.37■■□□□ 1.81
THUMPD2-201ENST00000378727 PHLDB1Q86UU1 1377 aa26.36■■□□□ 1.81
THUMPD2-201ENST00000378727 CCDC18Q5T9S5 1454 aa26.36■■□□□ 1.81
THUMPD2-201ENST00000378727 CARMIL2Q6F5E8 1435 aa26.35■■□□□ 1.81
THUMPD2-201ENST00000378727 EPRSP07814 1512 aaKnown RBP26.34■■□□□ 1.81
THUMPD2-201ENST00000378727 CCNB3Q8WWL7 1395 aa26.33■■□□□ 1.81
THUMPD2-201ENST00000378727 RAPGEF6Q8TEU7 1601 aa26.31■■□□□ 1.8
THUMPD2-201ENST00000378727 MTUS2Q5JR59 1369 aa26.31■■□□□ 1.8
THUMPD2-201ENST00000378727 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.3■■□□□ 1.8
THUMPD2-201ENST00000378727 MAGI3Q5TCQ9 1506 aa26.3■■□□□ 1.8
THUMPD2-201ENST00000378727 CDK13Q14004 1512 aaKnown RBP26.29■■□□□ 1.8
THUMPD2-201ENST00000378727 EHBP1L1Q8N3D4 1523 aa26.28■■□□□ 1.8
THUMPD2-201ENST00000378727 NUP153P49790 1475 aaKnown RBP26.27■■□□□ 1.8
THUMPD2-201ENST00000378727 SHROOM2Q13796 1616 aa26.26■■□□□ 1.79
THUMPD2-201ENST00000378727 PRG4Q92954 1404 aaPredicted RBP26.25■■□□□ 1.79
THUMPD2-201ENST00000378727 PLB1Q6P1J6 1458 aa26.23■■□□□ 1.79
THUMPD2-201ENST00000378727 SUPT6HQ7KZ85 1726 aaKnown RBP26.22■■□□□ 1.79
THUMPD2-201ENST00000378727 ARID3CA6NKF2 412 aa26.21■■□□□ 1.79
THUMPD2-201ENST00000378727 NCOA2Q15596 1464 aa26.21■■□□□ 1.79
THUMPD2-201ENST00000378727 ZEB1P37275 1124 aaPredicted RBP26.19■■□□□ 1.78
THUMPD2-201ENST00000378727 CLASP1Q7Z460 1538 aa26.18■■□□□ 1.78
THUMPD2-201ENST00000378727 ARHGEF11O15085 1522 aa26.18■■□□□ 1.78
THUMPD2-201ENST00000378727 CCER1Q8TC90 406 aaPredicted RBP26.18■■□□□ 1.78
THUMPD2-201ENST00000378727 ABCA8O94911 1581 aa26.16■■□□□ 1.78
THUMPD2-201ENST00000378727 FGD6Q6ZV73 1430 aa26.14■■□□□ 1.77
THUMPD2-201ENST00000378727 ERCC6L2Q5T890 1561 aa26.11■■□□□ 1.77
THUMPD2-201ENST00000378727 MYOM3Q5VTT5 1437 aa26.11■■□□□ 1.77
THUMPD2-201ENST00000378727 PTPRGP23470 1445 aa26.1■■□□□ 1.77
THUMPD2-201ENST00000378727 FAM50AQ14320 339 aaKnown RBP26.1■■□□□ 1.77
THUMPD2-201ENST00000378727 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.1■■□□□ 1.77
THUMPD2-201ENST00000378727 ITGAEP38570 1179 aa26.08■■□□□ 1.77
THUMPD2-201ENST00000378727 CDK11AQ9UQ88 783 aaPredicted RBP26.02■■□□□ 1.76
THUMPD2-201ENST00000378727 ATP10BO94823 1461 aa26■■□□□ 1.75
THUMPD2-201ENST00000378727 TROQ12816 1431 aaPredicted RBP25.99■■□□□ 1.75
THUMPD2-201ENST00000378727 PTPN23Q9H3S7 1636 aa25.99■■□□□ 1.75
THUMPD2-201ENST00000378727 UACAQ9BZF9 1416 aa25.96■■□□□ 1.75
THUMPD2-201ENST00000378727 ADCY10Q96PN6 1610 aa25.95■■□□□ 1.74
THUMPD2-201ENST00000378727 TCOF1Q13428 1488 aaKnown RBP25.95■■□□□ 1.74
THUMPD2-201ENST00000378727 MIA2Q96PC5 1412 aa25.93■■□□□ 1.74
THUMPD2-201ENST00000378727 KIF14Q15058 1648 aa25.92■■□□□ 1.74
THUMPD2-201ENST00000378727 PTPRKQ15262 1439 aa25.89■■□□□ 1.74
THUMPD2-201ENST00000378727 ABCC2Q92887 1545 aa25.88■■□□□ 1.73
THUMPD2-201ENST00000378727 RAB3GAP2Q9H2M9 1393 aa25.88■■□□□ 1.73
THUMPD2-201ENST00000378727 SETD5Q9C0A6 1442 aa25.88■■□□□ 1.73
THUMPD2-201ENST00000378727 DHX57Q6P158 1386 aaKnown RBP25.87■■□□□ 1.73
THUMPD2-201ENST00000378727 PLEKHD1A6NEE1 506 aa25.86■■□□□ 1.73
THUMPD2-201ENST00000378727 OSCARQ8IYS5 282 aa25.81■■□□□ 1.72
THUMPD2-201ENST00000378727 ITSN2Q9NZM3 1697 aa25.81■■□□□ 1.72
THUMPD2-201ENST00000378727 GPATCH8Q9UKJ3 1502 aaKnown RBP25.8■■□□□ 1.72
THUMPD2-201ENST00000378727 ABCC10Q5T3U5 1492 aa25.8■■□□□ 1.72
THUMPD2-201ENST00000378727 UHRF1BP1LA0JNW5 1464 aa25.79■■□□□ 1.72
THUMPD2-201ENST00000378727 HFM1A2PYH4 1435 aa25.75■■□□□ 1.71
THUMPD2-201ENST00000378727 CDC42BPAQ5VT25 1732 aa25.75■■□□□ 1.71
THUMPD2-201ENST00000378727 ZNF644Q9H582 1327 aaPredicted RBP25.74■■□□□ 1.71
THUMPD2-201ENST00000378727 CLSPNQ9HAW4 1339 aa25.73■■□□□ 1.71
THUMPD2-201ENST00000378727 ZCCHC11Q5TAX3 1644 aaKnown RBP25.72■■□□□ 1.71
THUMPD2-201ENST00000378727 CFDP1Q9UEE9 299 aaPredicted RBP25.72■■□□□ 1.71
THUMPD2-201ENST00000378727 KDM5BQ9UGL1 1544 aa25.71■■□□□ 1.71
THUMPD2-201ENST00000378727 DNMT1P26358 1616 aaKnown RBP25.71■■□□□ 1.71
THUMPD2-201ENST00000378727 NAIPQ13075 1403 aa25.7■■□□□ 1.71
THUMPD2-201ENST00000378727 CAMSAP2Q08AD1 1489 aa25.7■■□□□ 1.7
THUMPD2-201ENST00000378727 DAPK1P53355 1430 aa25.69■■□□□ 1.7
THUMPD2-201ENST00000378727 ABCC5O15440 1437 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms