RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 NISCHQ9Y2I1 1504 aa39.15■■■■□ 3.86
THUMPD2-201ENST00000378727 CCDC180Q9P1Z9 1646 aa34.04■■■■□ 3.04
THUMPD2-201ENST00000378727 ZCCHC6Q5VYS8 1495 aaKnown RBP32.91■■■□□ 2.86
THUMPD2-201ENST00000378727 DCAF1Q9Y4B6 1507 aa32.33■■■□□ 2.77
THUMPD2-201ENST00000378727 DCAF8L2P0C7V8 631 aa32.29■■■□□ 2.76
THUMPD2-201ENST00000378727 ABCC9O60706 1549 aa32.12■■■□□ 2.73
THUMPD2-201ENST00000378727 SHROOM4Q9ULL8 1493 aa32.08■■■□□ 2.73
THUMPD2-201ENST00000378727 MYO15BQ96JP2 1530 aa31.88■■■□□ 2.69
THUMPD2-201ENST00000378727 NACADO15069 1562 aa31.67■■■□□ 2.66
THUMPD2-201ENST00000378727 SCRIBQ14160 1630 aa31.38■■■□□ 2.61
THUMPD2-201ENST00000378727 RB1CC1Q8TDY2 1594 aa31.36■■■□□ 2.61
THUMPD2-201ENST00000378727 SUPT5HO00267 1087 aaKnown RBP30.9■■■□□ 2.54
THUMPD2-201ENST00000378727 UNC13AQ9UPW8 1703 aa30.84■■■□□ 2.53
THUMPD2-201ENST00000378727 BICRAQ9NZM4 1560 aa30.5■■■□□ 2.47
THUMPD2-201ENST00000378727 CECR2Q9BXF3 1484 aa30.46■■■□□ 2.47
THUMPD2-201ENST00000378727 RSF1Q96T23 1441 aaPredicted RBP30.44■■■□□ 2.46
THUMPD2-201ENST00000378727 PABPN1Q86U42 306 aaKnown RBP eCLIP30.34■■■□□ 2.45
THUMPD2-201ENST00000378727 MROH2BQ7Z745 1585 aa30.28■■■□□ 2.44
THUMPD2-201ENST00000378727 BAZ1AQ9NRL2 1556 aaPredicted RBP30.19■■■□□ 2.42
THUMPD2-201ENST00000378727 SMARCA4P51532 1647 aa30.07■■■□□ 2.4
THUMPD2-201ENST00000378727 WIZO95785 1651 aa30.06■■■□□ 2.4
THUMPD2-201ENST00000378727 TOP2AP11388 1531 aaKnown RBP29.69■■■□□ 2.34
THUMPD2-201ENST00000378727 PEG3Q9GZU2 1588 aa29.69■■■□□ 2.34
THUMPD2-201ENST00000378727 CHIC1Q5VXU3 224 aa29.66■■■□□ 2.34
THUMPD2-201ENST00000378727 ATAD2BQ9ULI0 1458 aa29.54■■■□□ 2.32
THUMPD2-201ENST00000378727 EIF4G1Q04637 1599 aaKnown RBP29.53■■■□□ 2.32
THUMPD2-201ENST00000378727 SMARCA2P51531 1590 aa29.49■■■□□ 2.31
THUMPD2-201ENST00000378727 CCDC88BA6NC98 1476 aa29.42■■■□□ 2.3
THUMPD2-201ENST00000378727 BAZ1BQ9UIG0 1483 aaKnown RBP29.36■■■□□ 2.29
THUMPD2-201ENST00000378727 NCAPD3P42695 1498 aa29.24■■■□□ 2.27
THUMPD2-201ENST00000378727 HMGXB3Q12766 1538 aa29.21■■■□□ 2.27
THUMPD2-201ENST00000378727 CC2D2AQ9P2K1 1620 aa29.08■■■□□ 2.25
THUMPD2-201ENST00000378727 TRIM41Q8WV44 630 aa29.01■■■□□ 2.23
THUMPD2-201ENST00000378727 ABCC8Q09428 1581 aa28.88■■■□□ 2.21
THUMPD2-201ENST00000378727 CFTRP13569 1480 aa28.64■■■□□ 2.18
THUMPD2-201ENST00000378727 WRNQ14191 1432 aaPredicted RBP eCLIP28.62■■■□□ 2.17
THUMPD2-201ENST00000378727 LOC105371045A0A1W2PR82 267 aa28.57■■■□□ 2.16
THUMPD2-201ENST00000378727 SYNJ1O43426 1573 aa28.54■■■□□ 2.16
THUMPD2-201ENST00000378727 FAM9AQ8IZU1 332 aaPredicted RBP28.53■■■□□ 2.16
THUMPD2-201ENST00000378727 PRDM2Q13029 1718 aa28.51■■■□□ 2.15
THUMPD2-201ENST00000378727 CADPSQ9ULU8 1353 aa28.51■■■□□ 2.15
THUMPD2-201ENST00000378727 DNAJC5BQ9UF47 199 aa28.39■■■□□ 2.13
THUMPD2-201ENST00000378727 TOP2BQ02880 1626 aa28.39■■■□□ 2.13
THUMPD2-201ENST00000378727 BIVM-ERCC5R4GMW8 1640 aa28.35■■■□□ 2.13
THUMPD2-201ENST00000378727 SOGA1O94964 1423 aa28.35■■■□□ 2.13
THUMPD2-201ENST00000378727 CUX1P39880 1505 aa28.3■■■□□ 2.12
THUMPD2-201ENST00000378727 NESP48681 1621 aa28.28■■■□□ 2.12
THUMPD2-201ENST00000378727 RUSC2Q8N2Y8 1516 aa28.27■■■□□ 2.12
THUMPD2-201ENST00000378727 EEA1Q15075 1411 aa28.23■■■□□ 2.11
THUMPD2-201ENST00000378727 LAMC3Q9Y6N6 1575 aa28.21■■■□□ 2.11
THUMPD2-201ENST00000378727 FANCD2Q9BXW9 1451 aa28.2■■■□□ 2.11
THUMPD2-201ENST00000378727 EHMT2Q96KQ7 1210 aa28.15■■■□□ 2.1
THUMPD2-201ENST00000378727 CSRNP3Q8WYN3 585 aa28.11■■■□□ 2.09
THUMPD2-201ENST00000378727 CEP164Q9UPV0 1460 aa27.99■■■□□ 2.07
THUMPD2-201ENST00000378727 PDS5BQ9NTI5 1447 aa27.97■■■□□ 2.07
THUMPD2-201ENST00000378727 DNMBPQ6XZF7 1577 aa27.96■■■□□ 2.07
THUMPD2-201ENST00000378727 FGD5Q6ZNL6 1462 aa27.95■■■□□ 2.07
THUMPD2-201ENST00000378727 TOPBP1Q92547 1522 aa27.93■■■□□ 2.06
THUMPD2-201ENST00000378727 KIF21AQ7Z4S6 1674 aa27.92■■■□□ 2.06
THUMPD2-201ENST00000378727 KIF21BO75037 1637 aa27.91■■■□□ 2.06
THUMPD2-201ENST00000378727 GOLGA3Q08378 1498 aa27.88■■■□□ 2.05
THUMPD2-201ENST00000378727 URB2Q14146 1524 aaKnown RBP27.87■■■□□ 2.05
THUMPD2-201ENST00000378727 KIF27Q86VH2 1401 aa27.86■■■□□ 2.05
THUMPD2-201ENST00000378727 TNIKQ9UKE5 1360 aa27.82■■■□□ 2.04
THUMPD2-201ENST00000378727 POLA1P09884 1462 aaPredicted RBP27.81■■■□□ 2.04
THUMPD2-201ENST00000378727 CUX2O14529 1486 aa27.79■■■□□ 2.04
THUMPD2-201ENST00000378727 RAPGEF2Q9Y4G8 1499 aa27.76■■■□□ 2.03
THUMPD2-201ENST00000378727 UBTFP17480 764 aaKnown RBP27.76■■■□□ 2.03
THUMPD2-201ENST00000378727 PRXQ9BXM0 1461 aa27.75■■■□□ 2.03
THUMPD2-201ENST00000378727 RAD54L2Q9Y4B4 1467 aa27.74■■■□□ 2.03
THUMPD2-201ENST00000378727 CEP162Q5TB80 1403 aa27.71■■■□□ 2.03
THUMPD2-201ENST00000378727 ABCA10Q8WWZ4 1543 aa27.7■■■□□ 2.02
THUMPD2-201ENST00000378727 ERICH3Q5RHP9 1530 aa27.68■■■□□ 2.02
THUMPD2-201ENST00000378727 IGF1RP08069 1367 aa27.64■■■□□ 2.02
THUMPD2-201ENST00000378727 MRC2Q9UBG0 1479 aa27.64■■■□□ 2.01
THUMPD2-201ENST00000378727 WDR97A6NE52 1622 aa27.62■■■□□ 2.01
THUMPD2-201ENST00000378727 TARBP1Q13395 1621 aaKnown RBP27.51■■□□□ 1.99
THUMPD2-201ENST00000378727 WDR62O43379 1518 aa27.5■■□□□ 1.99
THUMPD2-201ENST00000378727 CARMIL1Q5VZK9 1371 aa27.49■■□□□ 1.99
THUMPD2-201ENST00000378727 ERCC6Q03468 1493 aa27.48■■□□□ 1.99
THUMPD2-201ENST00000378727 ABCA5Q8WWZ7 1642 aa27.48■■□□□ 1.99
THUMPD2-201ENST00000378727 CLIP1P30622 1438 aa27.45■■□□□ 1.98
THUMPD2-201ENST00000378727 TDRD9Q8NDG6 1382 aaKnown RBP27.44■■□□□ 1.98
THUMPD2-201ENST00000378727 THOC2Q8NI27 1593 aaKnown RBP27.41■■□□□ 1.98
THUMPD2-201ENST00000378727 GAPVD1Q14C86 1478 aa27.39■■□□□ 1.98
THUMPD2-201ENST00000378727 CUL7Q14999 1698 aa27.39■■□□□ 1.97
THUMPD2-201ENST00000378727 PCGF6Q9BYE7 350 aa27.36■■□□□ 1.97
THUMPD2-201ENST00000378727 RANGAP1P46060 587 aaPredicted RBP27.31■■□□□ 1.96
THUMPD2-201ENST00000378727 IFT140Q96RY7 1462 aa27.31■■□□□ 1.96
THUMPD2-201ENST00000378727 TRIM26Q12899 539 aaPredicted RBP27.28■■□□□ 1.96
THUMPD2-201ENST00000378727 PBRM1Q86U86 1689 aa27.25■■□□□ 1.95
THUMPD2-201ENST00000378727 AQRO60306 1485 aaKnown RBP eCLIP27.25■■□□□ 1.952e-8■■■■■ 42.3
THUMPD2-201ENST00000378727 VPS8Q8N3P4 1428 aa27.23■■□□□ 1.95
THUMPD2-201ENST00000378727 ZNF608Q9ULD9 1512 aaPredicted RBP27.22■■□□□ 1.95
THUMPD2-201ENST00000378727 PPARGC1BQ86YN6 1023 aaKnown RBP27.22■■□□□ 1.95
THUMPD2-201ENST00000378727 ARAP1Q96P48 1450 aa27.21■■□□□ 1.95
THUMPD2-201ENST00000378727 ARHGAP35Q9NRY4 1499 aa27.17■■□□□ 1.94
THUMPD2-201ENST00000378727 GRIN2BQ13224 1484 aa27.14■■□□□ 1.94
THUMPD2-201ENST00000378727 CTTNBP2Q8WZ74 1663 aa27.13■■□□□ 1.93
THUMPD2-201ENST00000378727 EIF4G3O43432 1585 aaKnown RBP27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms