RNA–Protein interactions for RNA: ENST00000378011.8

PGAP3-203, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 2 BASIC

Gene PGAP3, Length 2,533 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-203ENST00000378011 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.2■■□□□ 1.78
PGAP3-203ENST00000378011 KANK4Q5T7N3 995 aaPredicted RBP26.2■■□□□ 1.78
PGAP3-203ENST00000378011 P3H3Q8IVL6 736 aa26.2■■□□□ 1.78
PGAP3-203ENST00000378011 PBRM1Q86U86 1689 aa26.18■■□□□ 1.78
PGAP3-203ENST00000378011 ZEB1P37275 1124 aaPredicted RBP26.15■■□□□ 1.78
PGAP3-203ENST00000378011 ZNF608Q9ULD9 1512 aaPredicted RBP26.12■■□□□ 1.77
PGAP3-203ENST00000378011 IFT140Q96RY7 1462 aa26.11■■□□□ 1.77
PGAP3-203ENST00000378011 FHOD3Q2V2M9 1422 aa26.1■■□□□ 1.77
PGAP3-203ENST00000378011 THOC2Q8NI27 1593 aaKnown RBP26.08■■□□□ 1.77
PGAP3-203ENST00000378011 HNRNPUL2Q1KMD3 747 aaKnown RBP26.07■■□□□ 1.76
PGAP3-203ENST00000378011 CCER1Q8TC90 406 aaPredicted RBP26.07■■□□□ 1.76
PGAP3-203ENST00000378011 EFCAB5A4FU69 1503 aa26.05■■□□□ 1.76
PGAP3-203ENST00000378011 GRIN2BQ13224 1484 aa26.04■■□□□ 1.76
PGAP3-203ENST00000378011 FHAD1B1AJZ9 1412 aa26.03■■□□□ 1.76
PGAP3-203ENST00000378011 ADAMTS12P58397 1594 aa26.03■■□□□ 1.76
PGAP3-203ENST00000378011 PCF11O94913 1555 aaKnown RBP26.02■■□□□ 1.76
PGAP3-203ENST00000378011 TIAM1Q13009 1591 aa26■■□□□ 1.75
PGAP3-203ENST00000378011 ATP1B4Q9UN42 357 aaPredicted RBP25.97■■□□□ 1.75
PGAP3-203ENST00000378011 EIF4G3O43432 1585 aaKnown RBP25.96■■□□□ 1.75
PGAP3-203ENST00000378011 SAMD9Q5K651 1589 aa25.94■■□□□ 1.74
PGAP3-203ENST00000378011 MAP3K1Q13233 1512 aa25.93■■□□□ 1.74
PGAP3-203ENST00000378011 SNAPC4Q5SXM2 1469 aa25.89■■□□□ 1.74
PGAP3-203ENST00000378011 LRRC9Q6ZRR7 1453 aa25.88■■□□□ 1.73
PGAP3-203ENST00000378011 FYCO1Q9BQS8 1478 aa25.88■■□□□ 1.73
PGAP3-203ENST00000378011 CFAP43Q8NDM7 1665 aa25.88■■□□□ 1.73
PGAP3-203ENST00000378011 CASKIN1Q8WXD9 1431 aa25.88■■□□□ 1.73
PGAP3-203ENST00000378011 FMN1Q68DA7 1419 aa25.87■■□□□ 1.73
PGAP3-203ENST00000378011 RRBP1Q9P2E9 1410 aaKnown RBP25.86■■□□□ 1.73
PGAP3-203ENST00000378011 IQGAP2Q13576 1575 aa25.85■■□□□ 1.73
PGAP3-203ENST00000378011 CCNB3Q8WWL7 1395 aa25.79■■□□□ 1.72
PGAP3-203ENST00000378011 LRRIQ1Q96JM4 1722 aa25.77■■□□□ 1.72
PGAP3-203ENST00000378011 GRIN2AQ12879 1464 aa25.77■■□□□ 1.72
PGAP3-203ENST00000378011 PHLDB1Q86UU1 1377 aa25.75■■□□□ 1.71
PGAP3-203ENST00000378011 MAGI1Q96QZ7 1491 aaPredicted RBP25.73■■□□□ 1.71
PGAP3-203ENST00000378011 ITGAEP38570 1179 aa25.7■■□□□ 1.71
PGAP3-203ENST00000378011 KIAA0586Q9BVV6 1533 aa25.69■■□□□ 1.7
PGAP3-203ENST00000378011 FBLN2P98095 1184 aa25.69■■□□□ 1.7
PGAP3-203ENST00000378011 CHMP7Q8WUX9 453 aaPredicted RBP25.69■■□□□ 1.7
PGAP3-203ENST00000378011 UGGT2Q9NYU1 1516 aa25.68■■□□□ 1.7
PGAP3-203ENST00000378011 SYNJ2O15056 1496 aa25.67■■□□□ 1.7
PGAP3-203ENST00000378011 ACIN1Q9UKV3 1341 aaKnown RBP25.66■■□□□ 1.7
PGAP3-203ENST00000378011 CEP170Q5SW79 1584 aa25.63■■□□□ 1.69
PGAP3-203ENST00000378011 MTUS2Q5JR59 1369 aa25.62■■□□□ 1.69
PGAP3-203ENST00000378011 DISP1Q96F81 1524 aa25.6■■□□□ 1.69
PGAP3-203ENST00000378011 FAM50AQ14320 339 aaKnown RBP25.59■■□□□ 1.69
PGAP3-203ENST00000378011 KIAA0556O60303 1618 aa25.59■■□□□ 1.69
PGAP3-203ENST00000378011 HECW1Q76N89 1606 aa25.55■■□□□ 1.68
PGAP3-203ENST00000378011 ARID3CA6NKF2 412 aa25.54■■□□□ 1.68
PGAP3-203ENST00000378011 MAGI3Q5TCQ9 1506 aa25.52■■□□□ 1.68
PGAP3-203ENST00000378011 NEUROD1Q13562 356 aa25.52■■□□□ 1.68
PGAP3-203ENST00000378011 NUP160Q12769 1436 aa25.51■■□□□ 1.67
PGAP3-203ENST00000378011 CCDC18Q5T9S5 1454 aa25.51■■□□□ 1.67
PGAP3-203ENST00000378011 EPRSP07814 1512 aaKnown RBP25.5■■□□□ 1.67
PGAP3-203ENST00000378011 CDK13Q14004 1512 aaKnown RBP25.5■■□□□ 1.67
PGAP3-203ENST00000378011 DHX57Q6P158 1386 aaKnown RBP25.49■■□□□ 1.67
PGAP3-203ENST00000378011 NCOA2Q15596 1464 aa25.49■■□□□ 1.67
PGAP3-203ENST00000378011 EHBP1L1Q8N3D4 1523 aa25.48■■□□□ 1.67
PGAP3-203ENST00000378011 SUPT6HQ7KZ85 1726 aaKnown RBP25.48■■□□□ 1.67
PGAP3-203ENST00000378011 GTF3C3Q9Y5Q9 886 aa25.47■■□□□ 1.67
PGAP3-203ENST00000378011 FGD6Q6ZV73 1430 aa25.47■■□□□ 1.67
PGAP3-203ENST00000378011 JPH4Q96JJ6 628 aa25.44■■□□□ 1.66
PGAP3-203ENST00000378011 RAB3GAP2Q9H2M9 1393 aa25.42■■□□□ 1.66
PGAP3-203ENST00000378011 RAPGEF6Q8TEU7 1601 aa25.4■■□□□ 1.66
PGAP3-203ENST00000378011 MYOM3Q5VTT5 1437 aa25.4■■□□□ 1.66
PGAP3-203ENST00000378011 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.38■■□□□ 1.65
PGAP3-203ENST00000378011 NUP153P49790 1475 aaKnown RBP25.38■■□□□ 1.65
PGAP3-203ENST00000378011 ARHGEF11O15085 1522 aa25.37■■□□□ 1.65
PGAP3-203ENST00000378011 SETD5Q9C0A6 1442 aa25.37■■□□□ 1.65
PGAP3-203ENST00000378011 CHD1O14646 1710 aa25.36■■□□□ 1.65
PGAP3-203ENST00000378011 CARMIL2Q6F5E8 1435 aa25.35■■□□□ 1.65
PGAP3-203ENST00000378011 PLB1Q6P1J6 1458 aa25.34■■□□□ 1.65
PGAP3-203ENST00000378011 CLSPNQ9HAW4 1339 aa25.32■■□□□ 1.64
PGAP3-203ENST00000378011 PTPN23Q9H3S7 1636 aa25.3■■□□□ 1.64
PGAP3-203ENST00000378011 PTPRKQ15262 1439 aa25.29■■□□□ 1.64
PGAP3-203ENST00000378011 PRG4Q92954 1404 aaPredicted RBP25.22■■□□□ 1.63
PGAP3-203ENST00000378011 CENPBP07199 599 aaPredicted RBP25.21■■□□□ 1.63
PGAP3-203ENST00000378011 BCL11AQ9H165 835 aa25.21■■□□□ 1.63
PGAP3-203ENST00000378011 CDK11AQ9UQ88 783 aaPredicted RBP25.19■■□□□ 1.62
PGAP3-203ENST00000378011 MAPKBP1O60336 1514 aa25.19■■□□□ 1.62
PGAP3-203ENST00000378011 TCOF1Q13428 1488 aaKnown RBP25.18■■□□□ 1.62
PGAP3-203ENST00000378011 ABCA8O94911 1581 aa25.16■■□□□ 1.62
PGAP3-203ENST00000378011 MIA2Q96PC5 1412 aa25.15■■□□□ 1.62
PGAP3-203ENST00000378011 ZNF316A6NFI3 1004 aaPredicted RBP25.14■■□□□ 1.61
PGAP3-203ENST00000378011 HFM1A2PYH4 1435 aa25.13■■□□□ 1.61
PGAP3-203ENST00000378011 TROQ12816 1431 aaPredicted RBP25.13■■□□□ 1.61
PGAP3-203ENST00000378011 CHIC2Q9UKJ5 165 aa25.12■■□□□ 1.61
PGAP3-203ENST00000378011 PTPRGP23470 1445 aa25.1■■□□□ 1.61
PGAP3-203ENST00000378011 NAIPQ13075 1403 aa25.1■■□□□ 1.61
PGAP3-203ENST00000378011 KIF14Q15058 1648 aa25.09■■□□□ 1.61
PGAP3-203ENST00000378011 SHROOM2Q13796 1616 aa25.09■■□□□ 1.61
PGAP3-203ENST00000378011 ATP10BO94823 1461 aa25.08■■□□□ 1.6
PGAP3-203ENST00000378011 ZNF644Q9H582 1327 aaPredicted RBP25.07■■□□□ 1.6
PGAP3-203ENST00000378011 DIEXFQ68CQ4 756 aaKnown RBP25.07■■□□□ 1.6
PGAP3-203ENST00000378011 RRP7BPQ9NSQ0 103 aa25.07■■□□□ 1.6
PGAP3-203ENST00000378011 ERCC6L2Q5T890 1561 aa25.06■■□□□ 1.6
PGAP3-203ENST00000378011 ADCY10Q96PN6 1610 aa25.03■■□□□ 1.6
PGAP3-203ENST00000378011 SIN3AQ96ST3 1273 aa25.03■■□□□ 1.6
PGAP3-203ENST00000378011 PLEKHD1A6NEE1 506 aa25.02■■□□□ 1.6
PGAP3-203ENST00000378011 GPATCH8Q9UKJ3 1502 aaKnown RBP24.99■■□□□ 1.59
PGAP3-203ENST00000378011 GCC2Q8IWJ2 1684 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms