RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 ADAMTS12P58397 1594 aa27.47■■□□□ 1.99
CTTN-203ENST00000376561 EIF4G3O43432 1585 aaKnown RBP27.46■■□□□ 1.99
CTTN-203ENST00000376561 TTBK1Q5TCY1 1321 aaPredicted RBP27.41■■□□□ 1.98
CTTN-203ENST00000376561 APLP2Q06481 763 aa27.4■■□□□ 1.98
CTTN-203ENST00000376561 EFCAB5A4FU69 1503 aa27.36■■□□□ 1.97
CTTN-203ENST00000376561 SNAPC4Q5SXM2 1469 aa27.34■■□□□ 1.97
CTTN-203ENST00000376561 MAGI1Q96QZ7 1491 aaPredicted RBP27.27■■□□□ 1.96
CTTN-203ENST00000376561 P3H3Q8IVL6 736 aa27.26■■□□□ 1.96
CTTN-203ENST00000376561 FHOD3Q2V2M9 1422 aa27.25■■□□□ 1.95
CTTN-203ENST00000376561 SAMD9Q5K651 1589 aa27.24■■□□□ 1.95
CTTN-203ENST00000376561 GRIN2AQ12879 1464 aa27.21■■□□□ 1.95
CTTN-203ENST00000376561 IQGAP2Q13576 1575 aa27.21■■□□□ 1.95
CTTN-203ENST00000376561 HRCP23327 699 aa27.19■■□□□ 1.94
CTTN-203ENST00000376561 SYNJ2O15056 1496 aa27.17■■□□□ 1.94
CTTN-203ENST00000376561 PCF11O94913 1555 aaKnown RBP27.16■■□□□ 1.94
CTTN-203ENST00000376561 KANK4Q5T7N3 995 aaPredicted RBP27.15■■□□□ 1.94
CTTN-203ENST00000376561 MAP3K1Q13233 1512 aa27.14■■□□□ 1.93
CTTN-203ENST00000376561 FMN1Q68DA7 1419 aa27.12■■□□□ 1.93
CTTN-203ENST00000376561 KIAA0586Q9BVV6 1533 aa27.11■■□□□ 1.93
CTTN-203ENST00000376561 CHMP7Q8WUX9 453 aaPredicted RBP27.11■■□□□ 1.93
CTTN-203ENST00000376561 TIAM1Q13009 1591 aa27.11■■□□□ 1.93
CTTN-203ENST00000376561 FYCO1Q9BQS8 1478 aa27.09■■□□□ 1.93
CTTN-203ENST00000376561 CASKIN1Q8WXD9 1431 aa27.09■■□□□ 1.93
CTTN-203ENST00000376561 UGGT2Q9NYU1 1516 aa27.07■■□□□ 1.92
CTTN-203ENST00000376561 CEP170Q5SW79 1584 aa27.04■■□□□ 1.92
CTTN-203ENST00000376561 CFAP43Q8NDM7 1665 aa27.04■■□□□ 1.92
CTTN-203ENST00000376561 FBLN2P98095 1184 aa27.03■■□□□ 1.92
CTTN-203ENST00000376561 ATP1B4Q9UN42 357 aaPredicted RBP27■■□□□ 1.91
CTTN-203ENST00000376561 NUP160Q12769 1436 aa26.99■■□□□ 1.91
CTTN-203ENST00000376561 LRRC9Q6ZRR7 1453 aa26.99■■□□□ 1.91
CTTN-203ENST00000376561 DISP1Q96F81 1524 aa26.93■■□□□ 1.9
CTTN-203ENST00000376561 KIAA0556O60303 1618 aa26.93■■□□□ 1.9
CTTN-203ENST00000376561 LRRIQ1Q96JM4 1722 aa26.89■■□□□ 1.9
CTTN-203ENST00000376561 RRBP1Q9P2E9 1410 aaKnown RBP26.87■■□□□ 1.89
CTTN-203ENST00000376561 CHD1O14646 1710 aa26.84■■□□□ 1.89
CTTN-203ENST00000376561 HECW1Q76N89 1606 aa26.82■■□□□ 1.88
CTTN-203ENST00000376561 HNRNPUL2Q1KMD3 747 aaKnown RBP26.82■■□□□ 1.88
CTTN-203ENST00000376561 JPH4Q96JJ6 628 aa26.81■■□□□ 1.88
CTTN-203ENST00000376561 CCDC18Q5T9S5 1454 aa26.78■■□□□ 1.88
CTTN-203ENST00000376561 CCNB3Q8WWL7 1395 aa26.78■■□□□ 1.88
CTTN-203ENST00000376561 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.77■■□□□ 1.88
CTTN-203ENST00000376561 PHLDB1Q86UU1 1377 aa26.76■■□□□ 1.87
CTTN-203ENST00000376561 CARMIL2Q6F5E8 1435 aa26.76■■□□□ 1.87
CTTN-203ENST00000376561 ZEB1P37275 1124 aaPredicted RBP26.75■■□□□ 1.87
CTTN-203ENST00000376561 MTUS2Q5JR59 1369 aa26.74■■□□□ 1.87
CTTN-203ENST00000376561 EPRSP07814 1512 aaKnown RBP26.73■■□□□ 1.87
CTTN-203ENST00000376561 EHBP1L1Q8N3D4 1523 aa26.69■■□□□ 1.86
CTTN-203ENST00000376561 RAPGEF6Q8TEU7 1601 aa26.69■■□□□ 1.86
CTTN-203ENST00000376561 CCER1Q8TC90 406 aaPredicted RBP26.68■■□□□ 1.86
CTTN-203ENST00000376561 CDK13Q14004 1512 aaKnown RBP26.66■■□□□ 1.86
CTTN-203ENST00000376561 MAGI3Q5TCQ9 1506 aa26.66■■□□□ 1.86
CTTN-203ENST00000376561 NUP153P49790 1475 aaKnown RBP26.64■■□□□ 1.86
CTTN-203ENST00000376561 SUPT6HQ7KZ85 1726 aaKnown RBP26.63■■□□□ 1.85
CTTN-203ENST00000376561 PRG4Q92954 1404 aaPredicted RBP26.62■■□□□ 1.85
CTTN-203ENST00000376561 NCOA2Q15596 1464 aa26.6■■□□□ 1.85
CTTN-203ENST00000376561 PLB1Q6P1J6 1458 aa26.6■■□□□ 1.85
CTTN-203ENST00000376561 SHROOM2Q13796 1616 aa26.59■■□□□ 1.85
CTTN-203ENST00000376561 ARID3CA6NKF2 412 aa26.58■■□□□ 1.85
CTTN-203ENST00000376561 ARHGEF11O15085 1522 aa26.56■■□□□ 1.84
CTTN-203ENST00000376561 FGD6Q6ZV73 1430 aa26.54■■□□□ 1.84
CTTN-203ENST00000376561 FAM50AQ14320 339 aaKnown RBP26.53■■□□□ 1.84
CTTN-203ENST00000376561 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.53■■□□□ 1.843e-7■■■□□ 14.8
CTTN-203ENST00000376561 ABCA8O94911 1581 aa26.52■■□□□ 1.84
CTTN-203ENST00000376561 ITGAEP38570 1179 aa26.52■■□□□ 1.84
CTTN-203ENST00000376561 MYOM3Q5VTT5 1437 aa26.52■■□□□ 1.84
CTTN-203ENST00000376561 CLASP1Q7Z460 1538 aa26.51■■□□□ 1.83
CTTN-203ENST00000376561 PTPRGP23470 1445 aa26.47■■□□□ 1.83
CTTN-203ENST00000376561 CDK11AQ9UQ88 783 aaPredicted RBP26.46■■□□□ 1.83
CTTN-203ENST00000376561 ERCC6L2Q5T890 1561 aa26.42■■□□□ 1.82
CTTN-203ENST00000376561 PTPN23Q9H3S7 1636 aa26.39■■□□□ 1.82
CTTN-203ENST00000376561 TROQ12816 1431 aaPredicted RBP26.39■■□□□ 1.82
CTTN-203ENST00000376561 ATP10BO94823 1461 aa26.37■■□□□ 1.81
CTTN-203ENST00000376561 MIA2Q96PC5 1412 aa26.34■■□□□ 1.81
CTTN-203ENST00000376561 TCOF1Q13428 1488 aaKnown RBP26.34■■□□□ 1.81
CTTN-203ENST00000376561 UACAQ9BZF9 1416 aa26.33■■□□□ 1.81
CTTN-203ENST00000376561 ADCY10Q96PN6 1610 aa26.32■■□□□ 1.8
CTTN-203ENST00000376561 RAB3GAP2Q9H2M9 1393 aa26.31■■□□□ 1.8
CTTN-203ENST00000376561 SETD5Q9C0A6 1442 aa26.31■■□□□ 1.8
CTTN-203ENST00000376561 DHX57Q6P158 1386 aaKnown RBP26.3■■□□□ 1.8
CTTN-203ENST00000376561 KIF14Q15058 1648 aa26.28■■□□□ 1.8
CTTN-203ENST00000376561 PLEKHD1A6NEE1 506 aa26.27■■□□□ 1.8
CTTN-203ENST00000376561 PTPRKQ15262 1439 aa26.27■■□□□ 1.8
CTTN-203ENST00000376561 ABCC2Q92887 1545 aa26.24■■□□□ 1.79
CTTN-203ENST00000376561 CLSPNQ9HAW4 1339 aa26.21■■□□□ 1.79
CTTN-203ENST00000376561 ITSN2Q9NZM3 1697 aa26.21■■□□□ 1.79
CTTN-203ENST00000376561 GPATCH8Q9UKJ3 1502 aaKnown RBP26.18■■□□□ 1.78
CTTN-203ENST00000376561 HFM1A2PYH4 1435 aa26.17■■□□□ 1.78
CTTN-203ENST00000376561 OSCARQ8IYS5 282 aa26.16■■□□□ 1.78
CTTN-203ENST00000376561 ABCC10Q5T3U5 1492 aa26.15■■□□□ 1.78
CTTN-203ENST00000376561 UHRF1BP1LA0JNW5 1464 aa26.14■■□□□ 1.78
CTTN-203ENST00000376561 CFDP1Q9UEE9 299 aaPredicted RBP26.12■■□□□ 1.77
CTTN-203ENST00000376561 CDC42BPAQ5VT25 1732 aa26.12■■□□□ 1.77
CTTN-203ENST00000376561 ZNF644Q9H582 1327 aaPredicted RBP26.11■■□□□ 1.77
CTTN-203ENST00000376561 NAIPQ13075 1403 aa26.11■■□□□ 1.77
CTTN-203ENST00000376561 DNMT1P26358 1616 aaKnown RBP26.1■■□□□ 1.77
CTTN-203ENST00000376561 CAMSAP2Q08AD1 1489 aa26.09■■□□□ 1.77
CTTN-203ENST00000376561 DAPK1P53355 1430 aa26.08■■□□□ 1.77
CTTN-203ENST00000376561 ZCCHC11Q5TAX3 1644 aaKnown RBP26.07■■□□□ 1.76
CTTN-203ENST00000376561 AKNAQ7Z591 1439 aa26.07■■□□□ 1.76
CTTN-203ENST00000376561 KDM5BQ9UGL1 1544 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms