RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 NISCHQ9Y2I1 1504 aa39.7■■■■□ 3.95
CTTN-203ENST00000376561 CCDC180Q9P1Z9 1646 aa34.51■■■■□ 3.11
CTTN-203ENST00000376561 ZCCHC6Q5VYS8 1495 aaKnown RBP33.38■■■□□ 2.93
CTTN-203ENST00000376561 DCAF1Q9Y4B6 1507 aa32.79■■■□□ 2.84
CTTN-203ENST00000376561 DCAF8L2P0C7V8 631 aa32.77■■■□□ 2.84
CTTN-203ENST00000376561 SHROOM4Q9ULL8 1493 aa32.56■■■□□ 2.8
CTTN-203ENST00000376561 ABCC9O60706 1549 aa32.53■■■□□ 2.8
CTTN-203ENST00000376561 MYO15BQ96JP2 1530 aa32.33■■■□□ 2.77
CTTN-203ENST00000376561 NACADO15069 1562 aa32.1■■■□□ 2.73
CTTN-203ENST00000376561 SCRIBQ14160 1630 aa31.81■■■□□ 2.68
CTTN-203ENST00000376561 RB1CC1Q8TDY2 1594 aa31.79■■■□□ 2.68
CTTN-203ENST00000376561 SUPT5HO00267 1087 aaKnown RBP31.41■■■□□ 2.62
CTTN-203ENST00000376561 UNC13AQ9UPW8 1703 aa31.21■■■□□ 2.59
CTTN-203ENST00000376561 RSF1Q96T23 1441 aaPredicted RBP30.88■■■□□ 2.53
CTTN-203ENST00000376561 CECR2Q9BXF3 1484 aa30.86■■■□□ 2.53
CTTN-203ENST00000376561 BICRAQ9NZM4 1560 aa30.86■■■□□ 2.53
CTTN-203ENST00000376561 PABPN1Q86U42 306 aaKnown RBP eCLIP30.72■■■□□ 2.518e-7■■■□□ 16.3
CTTN-203ENST00000376561 MROH2BQ7Z745 1585 aa30.7■■■□□ 2.5
CTTN-203ENST00000376561 BAZ1AQ9NRL2 1556 aaPredicted RBP30.63■■■□□ 2.49
CTTN-203ENST00000376561 SMARCA4P51532 1647 aa30.48■■■□□ 2.47
CTTN-203ENST00000376561 WIZO95785 1651 aa30.47■■■□□ 2.47
CTTN-203ENST00000376561 CHIC1Q5VXU3 224 aa30.14■■■□□ 2.42
CTTN-203ENST00000376561 TOP2AP11388 1531 aaKnown RBP30.12■■■□□ 2.41
CTTN-203ENST00000376561 PEG3Q9GZU2 1588 aa30.09■■■□□ 2.41
CTTN-203ENST00000376561 ATAD2BQ9ULI0 1458 aa29.94■■■□□ 2.38
CTTN-203ENST00000376561 EIF4G1Q04637 1599 aaKnown RBP29.91■■■□□ 2.38
CTTN-203ENST00000376561 SMARCA2P51531 1590 aa29.91■■■□□ 2.38
CTTN-203ENST00000376561 CCDC88BA6NC98 1476 aa29.83■■■□□ 2.37
CTTN-203ENST00000376561 BAZ1BQ9UIG0 1483 aaKnown RBP29.78■■■□□ 2.36
CTTN-203ENST00000376561 NCAPD3P42695 1498 aa29.64■■■□□ 2.33
CTTN-203ENST00000376561 HMGXB3Q12766 1538 aa29.61■■■□□ 2.33
CTTN-203ENST00000376561 TRIM41Q8WV44 630 aa29.5■■■□□ 2.31
CTTN-203ENST00000376561 CC2D2AQ9P2K1 1620 aa29.43■■■□□ 2.3
CTTN-203ENST00000376561 ABCC8Q09428 1581 aa29.29■■■□□ 2.28
CTTN-203ENST00000376561 WRNQ14191 1432 aaPredicted RBP eCLIP29.06■■■□□ 2.24
CTTN-203ENST00000376561 CFTRP13569 1480 aa29.04■■■□□ 2.24
CTTN-203ENST00000376561 LOC105371045A0A1W2PR82 267 aa29.02■■■□□ 2.24
CTTN-203ENST00000376561 FAM9AQ8IZU1 332 aaPredicted RBP28.99■■■□□ 2.23
CTTN-203ENST00000376561 SYNJ1O43426 1573 aa28.94■■■□□ 2.22
CTTN-203ENST00000376561 CADPSQ9ULU8 1353 aa28.9■■■□□ 2.22
CTTN-203ENST00000376561 PRDM2Q13029 1718 aa28.9■■■□□ 2.22
CTTN-203ENST00000376561 TOP2BQ02880 1626 aa28.79■■■□□ 2.2
CTTN-203ENST00000376561 SOGA1O94964 1423 aa28.77■■■□□ 2.2
CTTN-203ENST00000376561 BIVM-ERCC5R4GMW8 1640 aa28.76■■■□□ 2.19
CTTN-203ENST00000376561 EEA1Q15075 1411 aa28.7■■■□□ 2.19
CTTN-203ENST00000376561 CUX1P39880 1505 aa28.68■■■□□ 2.18
CTTN-203ENST00000376561 DNAJC5BQ9UF47 199 aa28.67■■■□□ 2.18
CTTN-203ENST00000376561 RUSC2Q8N2Y8 1516 aa28.66■■■□□ 2.18
CTTN-203ENST00000376561 NESP48681 1621 aa28.62■■■□□ 2.17
CTTN-203ENST00000376561 LAMC3Q9Y6N6 1575 aa28.6■■■□□ 2.17
CTTN-203ENST00000376561 EHMT2Q96KQ7 1210 aa28.6■■■□□ 2.17
CTTN-203ENST00000376561 FANCD2Q9BXW9 1451 aa28.59■■■□□ 2.17
CTTN-203ENST00000376561 CSRNP3Q8WYN3 585 aa28.56■■■□□ 2.16
CTTN-203ENST00000376561 CEP164Q9UPV0 1460 aa28.38■■■□□ 2.13
CTTN-203ENST00000376561 PDS5BQ9NTI5 1447 aa28.37■■■□□ 2.13
CTTN-203ENST00000376561 DNMBPQ6XZF7 1577 aa28.35■■■□□ 2.13
CTTN-203ENST00000376561 FGD5Q6ZNL6 1462 aa28.34■■■□□ 2.13
CTTN-203ENST00000376561 KIF21BO75037 1637 aa28.34■■■□□ 2.13
CTTN-203ENST00000376561 GOLGA3Q08378 1498 aa28.33■■■□□ 2.13
CTTN-203ENST00000376561 TOPBP1Q92547 1522 aa28.3■■■□□ 2.12
CTTN-203ENST00000376561 KIF27Q86VH2 1401 aa28.29■■■□□ 2.12
CTTN-203ENST00000376561 TNIKQ9UKE5 1360 aa28.28■■■□□ 2.12
CTTN-203ENST00000376561 KIF21AQ7Z4S6 1674 aa28.27■■■□□ 2.12
CTTN-203ENST00000376561 URB2Q14146 1524 aaKnown RBP28.23■■■□□ 2.11
CTTN-203ENST00000376561 UBTFP17480 764 aaKnown RBP28.22■■■□□ 2.11
CTTN-203ENST00000376561 CUX2O14529 1486 aa28.19■■■□□ 2.1
CTTN-203ENST00000376561 POLA1P09884 1462 aaPredicted RBP28.18■■■□□ 2.1
CTTN-203ENST00000376561 RAPGEF2Q9Y4G8 1499 aa28.17■■■□□ 2.1
CTTN-203ENST00000376561 PRXQ9BXM0 1461 aa28.15■■■□□ 2.1
CTTN-203ENST00000376561 CEP162Q5TB80 1403 aa28.15■■■□□ 2.1
CTTN-203ENST00000376561 ERICH3Q5RHP9 1530 aa28.11■■■□□ 2.09
CTTN-203ENST00000376561 RAD54L2Q9Y4B4 1467 aa28.1■■■□□ 2.09
CTTN-203ENST00000376561 ABCA10Q8WWZ4 1543 aa28.08■■■□□ 2.09
CTTN-203ENST00000376561 IGF1RP08069 1367 aa28.03■■■□□ 2.08
CTTN-203ENST00000376561 MRC2Q9UBG0 1479 aa28■■■□□ 2.07
CTTN-203ENST00000376561 WDR97A6NE52 1622 aa27.98■■■□□ 2.07
CTTN-203ENST00000376561 CARMIL1Q5VZK9 1371 aa27.9■■■□□ 2.06
CTTN-203ENST00000376561 CLIP1P30622 1438 aa27.89■■■□□ 2.06
CTTN-203ENST00000376561 PCGF6Q9BYE7 350 aa27.87■■■□□ 2.05
CTTN-203ENST00000376561 TARBP1Q13395 1621 aaKnown RBP27.87■■■□□ 2.05
CTTN-203ENST00000376561 ERCC6Q03468 1493 aa27.85■■■□□ 2.05
CTTN-203ENST00000376561 WDR62O43379 1518 aa27.85■■■□□ 2.05
CTTN-203ENST00000376561 ABCA5Q8WWZ7 1642 aa27.84■■■□□ 2.05
CTTN-203ENST00000376561 TDRD9Q8NDG6 1382 aaKnown RBP27.82■■■□□ 2.04
CTTN-203ENST00000376561 TRIM26Q12899 539 aaPredicted RBP27.8■■■□□ 2.04
CTTN-203ENST00000376561 CUL7Q14999 1698 aa27.79■■■□□ 2.04
CTTN-203ENST00000376561 GAPVD1Q14C86 1478 aa27.78■■■□□ 2.04
CTTN-203ENST00000376561 RANGAP1P46060 587 aaPredicted RBP27.74■■■□□ 2.03
CTTN-203ENST00000376561 THOC2Q8NI27 1593 aaKnown RBP27.74■■■□□ 2.03
CTTN-203ENST00000376561 IFT140Q96RY7 1462 aa27.68■■■□□ 2.02
CTTN-203ENST00000376561 VPS8Q8N3P4 1428 aa27.67■■■□□ 2.02
CTTN-203ENST00000376561 PPARGC1BQ86YN6 1023 aaKnown RBP27.66■■■□□ 2.02
CTTN-203ENST00000376561 PBRM1Q86U86 1689 aa27.62■■■□□ 2.01
CTTN-203ENST00000376561 AQRO60306 1485 aaKnown RBP eCLIP27.61■■■□□ 2.018e-8■■■■□ 25.6
CTTN-203ENST00000376561 ARAP1Q96P48 1450 aa27.61■■■□□ 2.01
CTTN-203ENST00000376561 ARHGAP35Q9NRY4 1499 aa27.57■■■□□ 2
CTTN-203ENST00000376561 ZNF608Q9ULD9 1512 aaPredicted RBP27.56■■■□□ 2
CTTN-203ENST00000376561 GRIN2BQ13224 1484 aa27.53■■■□□ 2
CTTN-203ENST00000376561 CTTNBP2Q8WZ74 1663 aa27.52■■■□□ 2
CTTN-203ENST00000376561 FHAD1B1AJZ9 1412 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms