RNA–Protein interactions for RNA: ENST00000373544.5

RABEPK-203, Transcript of Rab9 effector protein with kelch motifs, humanhuman

TSL 1 (best) BASIC

Gene RABEPK, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-203ENST00000373544 IFT140Q96RY7 1462 aa18.63■□□□□ 0.57
RABEPK-203ENST00000373544 KANK4Q5T7N3 995 aaPredicted RBP18.61■□□□□ 0.57
RABEPK-203ENST00000373544 CTTNBP2Q8WZ74 1663 aa18.59■□□□□ 0.57
RABEPK-203ENST00000373544 FHOD3Q2V2M9 1422 aa18.58■□□□□ 0.57
RABEPK-203ENST00000373544 GRIN2BQ13224 1484 aa18.56■□□□□ 0.56
RABEPK-203ENST00000373544 ATP1B4Q9UN42 357 aaPredicted RBP18.56■□□□□ 0.56
RABEPK-203ENST00000373544 EIF4G3O43432 1585 aaKnown RBP18.55■□□□□ 0.56
RABEPK-203ENST00000373544 FHAD1B1AJZ9 1412 aa18.54■□□□□ 0.56
RABEPK-203ENST00000373544 ADAMTS12P58397 1594 aa18.54■□□□□ 0.56
RABEPK-203ENST00000373544 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.52■□□□□ 0.56
RABEPK-203ENST00000373544 SNAPC4Q5SXM2 1469 aa18.51■□□□□ 0.55
RABEPK-203ENST00000373544 HNRNPUL2Q1KMD3 747 aaKnown RBP18.49■□□□□ 0.55
RABEPK-203ENST00000373544 PCF11O94913 1555 aaKnown RBP18.47■□□□□ 0.55
RABEPK-203ENST00000373544 FBLN2P98095 1184 aa18.46■□□□□ 0.55
RABEPK-203ENST00000373544 EFCAB5A4FU69 1503 aa18.46■□□□□ 0.54
RABEPK-203ENST00000373544 TIAM1Q13009 1591 aa18.41■□□□□ 0.54
RABEPK-203ENST00000373544 SAMD9Q5K651 1589 aa18.4■□□□□ 0.54
RABEPK-203ENST00000373544 CCER1Q8TC90 406 aaPredicted RBP18.4■□□□□ 0.54
RABEPK-203ENST00000373544 CHMP7Q8WUX9 453 aaPredicted RBP18.4■□□□□ 0.54
RABEPK-203ENST00000373544 IQGAP2Q13576 1575 aa18.39■□□□□ 0.53
RABEPK-203ENST00000373544 GRIN2AQ12879 1464 aa18.38■□□□□ 0.53
RABEPK-203ENST00000373544 FMN1Q68DA7 1419 aa18.35■□□□□ 0.53
RABEPK-203ENST00000373544 CASKIN1Q8WXD9 1431 aa18.35■□□□□ 0.53
RABEPK-203ENST00000373544 MAGI1Q96QZ7 1491 aaPredicted RBP18.34■□□□□ 0.53
RABEPK-203ENST00000373544 LRRC9Q6ZRR7 1453 aa18.34■□□□□ 0.53
RABEPK-203ENST00000373544 FYCO1Q9BQS8 1478 aa18.34■□□□□ 0.53
RABEPK-203ENST00000373544 SYNJ2O15056 1496 aa18.32■□□□□ 0.52
RABEPK-203ENST00000373544 ARID3CA6NKF2 412 aa18.32■□□□□ 0.52
RABEPK-203ENST00000373544 ITGAEP38570 1179 aa18.31■□□□□ 0.52
RABEPK-203ENST00000373544 CFAP43Q8NDM7 1665 aa18.3■□□□□ 0.52
RABEPK-203ENST00000373544 MAP3K1Q13233 1512 aa18.3■□□□□ 0.52
RABEPK-203ENST00000373544 KIAA0586Q9BVV6 1533 aa18.29■□□□□ 0.52
RABEPK-203ENST00000373544 ZEB1P37275 1124 aaPredicted RBP18.29■□□□□ 0.52
RABEPK-203ENST00000373544 CEP170Q5SW79 1584 aa18.29■□□□□ 0.52
RABEPK-203ENST00000373544 LRRIQ1Q96JM4 1722 aa18.28■□□□□ 0.52
RABEPK-203ENST00000373544 PHLDB1Q86UU1 1377 aa18.27■□□□□ 0.52
RABEPK-203ENST00000373544 RRBP1Q9P2E9 1410 aaKnown RBP18.26■□□□□ 0.51
RABEPK-203ENST00000373544 CCNB3Q8WWL7 1395 aa18.25■□□□□ 0.51
RABEPK-203ENST00000373544 UGGT2Q9NYU1 1516 aa18.25■□□□□ 0.51
RABEPK-203ENST00000373544 DISP1Q96F81 1524 aa18.24■□□□□ 0.51
RABEPK-203ENST00000373544 KIAA0556O60303 1618 aa18.21■□□□□ 0.5
RABEPK-203ENST00000373544 MTUS2Q5JR59 1369 aa18.2■□□□□ 0.5
RABEPK-203ENST00000373544 FAM50AQ14320 339 aaKnown RBP18.2■□□□□ 0.5
RABEPK-203ENST00000373544 NUP160Q12769 1436 aa18.18■□□□□ 0.5
RABEPK-203ENST00000373544 JPH4Q96JJ6 628 aa18.18■□□□□ 0.5
RABEPK-203ENST00000373544 CDK13Q14004 1512 aaKnown RBP18.16■□□□□ 0.5
RABEPK-203ENST00000373544 MAGI3Q5TCQ9 1506 aa18.15■□□□□ 0.5
RABEPK-203ENST00000373544 HECW1Q76N89 1606 aa18.13■□□□□ 0.49
RABEPK-203ENST00000373544 EPRSP07814 1512 aaKnown RBP18.13■□□□□ 0.49
RABEPK-203ENST00000373544 CHD1O14646 1710 aa18.12■□□□□ 0.49
RABEPK-203ENST00000373544 NCOA2Q15596 1464 aa18.09■□□□□ 0.49
RABEPK-203ENST00000373544 PLB1Q6P1J6 1458 aa18.09■□□□□ 0.49
RABEPK-203ENST00000373544 CCDC18Q5T9S5 1454 aa18.08■□□□□ 0.49
RABEPK-203ENST00000373544 NUP153P49790 1475 aaKnown RBP18.07■□□□□ 0.48
RABEPK-203ENST00000373544 CARMIL2Q6F5E8 1435 aa18.06■□□□□ 0.48
RABEPK-203ENST00000373544 EHBP1L1Q8N3D4 1523 aa18.06■□□□□ 0.48
RABEPK-203ENST00000373544 RAPGEF6Q8TEU7 1601 aa18.05■□□□□ 0.48
RABEPK-203ENST00000373544 FGD6Q6ZV73 1430 aa18.05■□□□□ 0.48
RABEPK-203ENST00000373544 SUPT6HQ7KZ85 1726 aaKnown RBP18.04■□□□□ 0.48
RABEPK-203ENST00000373544 AEBP2Q6ZN18 517 aaPredicted RBP18.04■□□□□ 0.48
RABEPK-203ENST00000373544 PRG4Q92954 1404 aaPredicted RBP18.03■□□□□ 0.48
RABEPK-203ENST00000373544 MYOM3Q5VTT5 1437 aa18.01■□□□□ 0.47
RABEPK-203ENST00000373544 DHX57Q6P158 1386 aaKnown RBP17.99■□□□□ 0.47
RABEPK-203ENST00000373544 RAB3GAP2Q9H2M9 1393 aa17.99■□□□□ 0.47
RABEPK-203ENST00000373544 ARHGEF11O15085 1522 aa17.96■□□□□ 0.47
RABEPK-203ENST00000373544 PTPRKQ15262 1439 aa17.95■□□□□ 0.46
RABEPK-203ENST00000373544 ERCC6L2Q5T890 1561 aa17.94■□□□□ 0.46
RABEPK-203ENST00000373544 SETD5Q9C0A6 1442 aa17.93■□□□□ 0.46
RABEPK-203ENST00000373544 PTPN23Q9H3S7 1636 aa17.93■□□□□ 0.46
RABEPK-203ENST00000373544 PTPRGP23470 1445 aa17.93■□□□□ 0.46
RABEPK-203ENST00000373544 CDK11AQ9UQ88 783 aaPredicted RBP17.92■□□□□ 0.46
RABEPK-203ENST00000373544 CHIC2Q9UKJ5 165 aa17.91■□□□□ 0.46
RABEPK-203ENST00000373544 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.9■□□□□ 0.46
RABEPK-203ENST00000373544 ABCA8O94911 1581 aa17.9■□□□□ 0.46
RABEPK-203ENST00000373544 ZNF644Q9H582 1327 aaPredicted RBP17.89■□□□□ 0.45
RABEPK-203ENST00000373544 SHROOM2Q13796 1616 aa17.87■□□□□ 0.45
RABEPK-203ENST00000373544 ATP10BO94823 1461 aa17.87■□□□□ 0.45
RABEPK-203ENST00000373544 TROQ12816 1431 aaPredicted RBP17.87■□□□□ 0.45
RABEPK-203ENST00000373544 KIF14Q15058 1648 aa17.86■□□□□ 0.45
RABEPK-203ENST00000373544 RRP7BPQ9NSQ0 103 aa17.84■□□□□ 0.45
RABEPK-203ENST00000373544 PLEKHD1A6NEE1 506 aa17.83■□□□□ 0.44
RABEPK-203ENST00000373544 CLASP1Q7Z460 1538 aa17.83■□□□□ 0.44
RABEPK-203ENST00000373544 ZNF777Q9ULD5 760 aaPredicted RBP17.82■□□□□ 0.44
RABEPK-203ENST00000373544 TCOF1Q13428 1488 aaKnown RBP17.82■□□□□ 0.44
RABEPK-203ENST00000373544 MIA2Q96PC5 1412 aa17.81■□□□□ 0.44
RABEPK-203ENST00000373544 UACAQ9BZF9 1416 aa17.79■□□□□ 0.44
RABEPK-203ENST00000373544 CFDP1Q9UEE9 299 aaPredicted RBP17.79■□□□□ 0.44
RABEPK-203ENST00000373544 MAPKBP1O60336 1514 aa17.79■□□□□ 0.44
RABEPK-203ENST00000373544 HFM1A2PYH4 1435 aa17.78■□□□□ 0.44
RABEPK-203ENST00000373544 NAIPQ13075 1403 aa17.78■□□□□ 0.44
RABEPK-203ENST00000373544 CLSPNQ9HAW4 1339 aa17.78■□□□□ 0.44
RABEPK-203ENST00000373544 GPATCH8Q9UKJ3 1502 aaKnown RBP17.76■□□□□ 0.43
RABEPK-203ENST00000373544 SIN3AQ96ST3 1273 aa17.75■□□□□ 0.43
RABEPK-203ENST00000373544 NEUROD1Q13562 356 aa17.74■□□□□ 0.43
RABEPK-203ENST00000373544 ADCY10Q96PN6 1610 aa17.74■□□□□ 0.43
RABEPK-203ENST00000373544 DAPK1P53355 1430 aa17.72■□□□□ 0.43
RABEPK-203ENST00000373544 CAMSAP2Q08AD1 1489 aa17.71■□□□□ 0.43
RABEPK-203ENST00000373544 ABCC5O15440 1437 aa17.71■□□□□ 0.43
RABEPK-203ENST00000373544 KDM6BO15054 1643 aa17.71■□□□□ 0.43
RABEPK-203ENST00000373544 ABCC2Q92887 1545 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms