RNA–Protein interactions for RNA: ENST00000373544.5

RABEPK-203, Transcript of Rab9 effector protein with kelch motifs, humanhuman

TSL 1 (best) BASIC

Gene RABEPK, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-203ENST00000373544 NISCHQ9Y2I1 1504 aa26.82■■□□□ 1.88
RABEPK-203ENST00000373544 CCDC180Q9P1Z9 1646 aa23.14■■□□□ 1.29
RABEPK-203ENST00000373544 ZCCHC6Q5VYS8 1495 aaKnown RBP22.55■■□□□ 1.2
RABEPK-203ENST00000373544 DCAF8L2P0C7V8 631 aa22.48■■□□□ 1.19
RABEPK-203ENST00000373544 SHROOM4Q9ULL8 1493 aa22.4■■□□□ 1.18
RABEPK-203ENST00000373544 ABCC9O60706 1549 aa22.06■■□□□ 1.12
RABEPK-203ENST00000373544 DCAF1Q9Y4B6 1507 aa21.99■■□□□ 1.11
RABEPK-203ENST00000373544 SUPT5HO00267 1087 aaKnown RBP21.63■■□□□ 1.05
RABEPK-203ENST00000373544 MYO15BQ96JP2 1530 aa21.6■■□□□ 1.05
RABEPK-203ENST00000373544 SCRIBQ14160 1630 aa21.6■■□□□ 1.05
RABEPK-203ENST00000373544 NACADO15069 1562 aa21.54■■□□□ 1.04
RABEPK-203ENST00000373544 RB1CC1Q8TDY2 1594 aa21.36■■□□□ 1.01
RABEPK-203ENST00000373544 UNC13AQ9UPW8 1703 aa21.04■□□□□ 0.96
RABEPK-203ENST00000373544 CECR2Q9BXF3 1484 aa20.99■□□□□ 0.95
RABEPK-203ENST00000373544 RSF1Q96T23 1441 aaPredicted RBP20.96■□□□□ 0.95
RABEPK-203ENST00000373544 PABPN1Q86U42 306 aaKnown RBP eCLIP20.95■□□□□ 0.94
RABEPK-203ENST00000373544 MROH2BQ7Z745 1585 aa20.84■□□□□ 0.93
RABEPK-203ENST00000373544 BICRAQ9NZM4 1560 aa20.81■□□□□ 0.92
RABEPK-203ENST00000373544 WIZO95785 1651 aa20.7■□□□□ 0.9
RABEPK-203ENST00000373544 CHIC1Q5VXU3 224 aa20.67■□□□□ 0.9
RABEPK-203ENST00000373544 BAZ1AQ9NRL2 1556 aaPredicted RBP20.66■□□□□ 0.9
RABEPK-203ENST00000373544 SMARCA4P51532 1647 aa20.59■□□□□ 0.89
RABEPK-203ENST00000373544 TOP2AP11388 1531 aaKnown RBP20.34■□□□□ 0.85
RABEPK-203ENST00000373544 CCDC88BA6NC98 1476 aa20.24■□□□□ 0.83
RABEPK-203ENST00000373544 ATAD2BQ9ULI0 1458 aa20.22■□□□□ 0.83
RABEPK-203ENST00000373544 SMARCA2P51531 1590 aa20.22■□□□□ 0.83
RABEPK-203ENST00000373544 PEG3Q9GZU2 1588 aa20.2■□□□□ 0.82
RABEPK-203ENST00000373544 TRIM41Q8WV44 630 aa20.18■□□□□ 0.82
RABEPK-203ENST00000373544 EIF4G1Q04637 1599 aaKnown RBP20.16■□□□□ 0.82
RABEPK-203ENST00000373544 BAZ1BQ9UIG0 1483 aaKnown RBP20.13■□□□□ 0.81
RABEPK-203ENST00000373544 LOC105371045A0A1W2PR82 267 aa20.05■□□□□ 0.8
RABEPK-203ENST00000373544 FAM9AQ8IZU1 332 aaPredicted RBP20.02■□□□□ 0.8
RABEPK-203ENST00000373544 ABCC8Q09428 1581 aa19.99■□□□□ 0.79
RABEPK-203ENST00000373544 NCAPD3P42695 1498 aa19.93■□□□□ 0.78
RABEPK-203ENST00000373544 EHMT2Q96KQ7 1210 aa19.9■□□□□ 0.78
RABEPK-203ENST00000373544 HMGXB3Q12766 1538 aa19.88■□□□□ 0.77
RABEPK-203ENST00000373544 CC2D2AQ9P2K1 1620 aa19.85■□□□□ 0.77
RABEPK-203ENST00000373544 WRNQ14191 1432 aaPredicted RBP eCLIP19.71■□□□□ 0.75
RABEPK-203ENST00000373544 SYNJ1O43426 1573 aa19.66■□□□□ 0.74
RABEPK-203ENST00000373544 SOGA1O94964 1423 aa19.65■□□□□ 0.74
RABEPK-203ENST00000373544 RUSC2Q8N2Y8 1516 aa19.61■□□□□ 0.73
RABEPK-203ENST00000373544 CFTRP13569 1480 aa19.58■□□□□ 0.73
RABEPK-203ENST00000373544 DNAJC5BQ9UF47 199 aa19.58■□□□□ 0.73
RABEPK-203ENST00000373544 CADPSQ9ULU8 1353 aa19.51■□□□□ 0.71
RABEPK-203ENST00000373544 TOP2BQ02880 1626 aa19.46■□□□□ 0.71
RABEPK-203ENST00000373544 CSRNP3Q8WYN3 585 aa19.45■□□□□ 0.7
RABEPK-203ENST00000373544 CUX1P39880 1505 aa19.44■□□□□ 0.7
RABEPK-203ENST00000373544 NESP48681 1621 aa19.44■□□□□ 0.7
RABEPK-203ENST00000373544 BIVM-ERCC5R4GMW8 1640 aa19.4■□□□□ 0.7
RABEPK-203ENST00000373544 PRDM2Q13029 1718 aa19.4■□□□□ 0.7
RABEPK-203ENST00000373544 EEA1Q15075 1411 aa19.37■□□□□ 0.69
RABEPK-203ENST00000373544 UBTFP17480 764 aaKnown RBP19.33■□□□□ 0.69
RABEPK-203ENST00000373544 FANCD2Q9BXW9 1451 aa19.33■□□□□ 0.69
RABEPK-203ENST00000373544 PCGF6Q9BYE7 350 aa19.32■□□□□ 0.68
RABEPK-203ENST00000373544 GOLGA3Q08378 1498 aa19.24■□□□□ 0.67
RABEPK-203ENST00000373544 PPARGC1BQ86YN6 1023 aaKnown RBP19.23■□□□□ 0.67
RABEPK-203ENST00000373544 CEP162Q5TB80 1403 aa19.21■□□□□ 0.67
RABEPK-203ENST00000373544 FGD5Q6ZNL6 1462 aa19.21■□□□□ 0.67
RABEPK-203ENST00000373544 TNIKQ9UKE5 1360 aa19.21■□□□□ 0.67
RABEPK-203ENST00000373544 CEP164Q9UPV0 1460 aa19.2■□□□□ 0.66
RABEPK-203ENST00000373544 RAPGEF2Q9Y4G8 1499 aa19.2■□□□□ 0.66
RABEPK-203ENST00000373544 LAMC3Q9Y6N6 1575 aa19.2■□□□□ 0.66
RABEPK-203ENST00000373544 RANGAP1P46060 587 aaPredicted RBP19.18■□□□□ 0.66
RABEPK-203ENST00000373544 KIF21BO75037 1637 aa19.17■□□□□ 0.66
RABEPK-203ENST00000373544 KIF27Q86VH2 1401 aa19.16■□□□□ 0.66
RABEPK-203ENST00000373544 CUX2O14529 1486 aa19.15■□□□□ 0.66
RABEPK-203ENST00000373544 TOPBP1Q92547 1522 aa19.13■□□□□ 0.65
RABEPK-203ENST00000373544 DNMBPQ6XZF7 1577 aa19.11■□□□□ 0.65
RABEPK-203ENST00000373544 RAD54L2Q9Y4B4 1467 aa19.11■□□□□ 0.65
RABEPK-203ENST00000373544 KIF21AQ7Z4S6 1674 aa19.1■□□□□ 0.65
RABEPK-203ENST00000373544 URB2Q14146 1524 aaKnown RBP19.1■□□□□ 0.65
RABEPK-203ENST00000373544 PDS5BQ9NTI5 1447 aa19.1■□□□□ 0.65
RABEPK-203ENST00000373544 TRIM26Q12899 539 aaPredicted RBP19.08■□□□□ 0.64
RABEPK-203ENST00000373544 POLA1P09884 1462 aaPredicted RBP19.07■□□□□ 0.64
RABEPK-203ENST00000373544 PRXQ9BXM0 1461 aa19.07■□□□□ 0.64
RABEPK-203ENST00000373544 TTBK1Q5TCY1 1321 aaPredicted RBP19.07■□□□□ 0.64
RABEPK-203ENST00000373544 IGF1RP08069 1367 aa19.02■□□□□ 0.64
RABEPK-203ENST00000373544 CLIP1P30622 1438 aa19.01■□□□□ 0.63
RABEPK-203ENST00000373544 ERICH3Q5RHP9 1530 aa18.98■□□□□ 0.63
RABEPK-203ENST00000373544 ABCA10Q8WWZ4 1543 aa18.95■□□□□ 0.62
RABEPK-203ENST00000373544 CARMIL1Q5VZK9 1371 aa18.93■□□□□ 0.62
RABEPK-203ENST00000373544 TDRD9Q8NDG6 1382 aaKnown RBP18.93■□□□□ 0.62
RABEPK-203ENST00000373544 MRC2Q9UBG0 1479 aa18.85■□□□□ 0.61
RABEPK-203ENST00000373544 WDR97A6NE52 1622 aa18.85■□□□□ 0.61
RABEPK-203ENST00000373544 ERCC6Q03468 1493 aa18.82■□□□□ 0.6
RABEPK-203ENST00000373544 VPS8Q8N3P4 1428 aa18.82■□□□□ 0.6
RABEPK-203ENST00000373544 GAPVD1Q14C86 1478 aa18.8■□□□□ 0.6
RABEPK-203ENST00000373544 TARBP1Q13395 1621 aaKnown RBP18.79■□□□□ 0.6
RABEPK-203ENST00000373544 HRCP23327 699 aa18.79■□□□□ 0.6
RABEPK-203ENST00000373544 ARAP1Q96P48 1450 aa18.79■□□□□ 0.6
RABEPK-203ENST00000373544 ABCA5Q8WWZ7 1642 aa18.78■□□□□ 0.6
RABEPK-203ENST00000373544 AQRO60306 1485 aaKnown RBP eCLIP18.76■□□□□ 0.59
RABEPK-203ENST00000373544 ARHGAP35Q9NRY4 1499 aa18.75■□□□□ 0.59
RABEPK-203ENST00000373544 P3H3Q8IVL6 736 aa18.73■□□□□ 0.59
RABEPK-203ENST00000373544 WDR62O43379 1518 aa18.72■□□□□ 0.59
RABEPK-203ENST00000373544 CUL7Q14999 1698 aa18.72■□□□□ 0.59
RABEPK-203ENST00000373544 APLP2Q06481 763 aa18.71■□□□□ 0.59
RABEPK-203ENST00000373544 ZNF608Q9ULD9 1512 aaPredicted RBP18.71■□□□□ 0.58
RABEPK-203ENST00000373544 THOC2Q8NI27 1593 aaKnown RBP18.65■□□□□ 0.58
RABEPK-203ENST00000373544 PBRM1Q86U86 1689 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms