RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 HNRNPUL2Q1KMD3 747 aaKnown RBP19.34■□□□□ 0.69
GPC3-201ENST00000370818 CTTNBP2Q8WZ74 1663 aa19.33■□□□□ 0.68
GPC3-201ENST00000370818 P3H3Q8IVL6 736 aa19.32■□□□□ 0.68
GPC3-201ENST00000370818 EFCAB5A4FU69 1503 aa19.31■□□□□ 0.68
GPC3-201ENST00000370818 WDR62O43379 1518 aa19.31■□□□□ 0.68
GPC3-201ENST00000370818 FHAD1B1AJZ9 1412 aa19.3■□□□□ 0.68
GPC3-201ENST00000370818 AQRO60306 1485 aaKnown RBP eCLIP19.3■□□□□ 0.682e-10■■■■□ 21.7
GPC3-201ENST00000370818 MAP3K1Q13233 1512 aa19.3■□□□□ 0.68
GPC3-201ENST00000370818 FHOD3Q2V2M9 1422 aa19.29■□□□□ 0.68
GPC3-201ENST00000370818 TIAM1Q13009 1591 aa19.28■□□□□ 0.68
GPC3-201ENST00000370818 ACIN1Q9UKV3 1341 aaKnown RBP19.27■□□□□ 0.68
GPC3-201ENST00000370818 RRBP1Q9P2E9 1410 aaKnown RBP19.26■□□□□ 0.67
GPC3-201ENST00000370818 PCF11O94913 1555 aaKnown RBP19.25■□□□□ 0.67
GPC3-201ENST00000370818 PBRM1Q86U86 1689 aa19.25■□□□□ 0.67
GPC3-201ENST00000370818 IFT140Q96RY7 1462 aa19.25■□□□□ 0.67
GPC3-201ENST00000370818 ZNF608Q9ULD9 1512 aaPredicted RBP19.23■□□□□ 0.67
GPC3-201ENST00000370818 ERCC6Q03468 1493 aa19.21■□□□□ 0.67
GPC3-201ENST00000370818 GRIN2BQ13224 1484 aa19.21■□□□□ 0.67
GPC3-201ENST00000370818 LRRC9Q6ZRR7 1453 aa19.21■□□□□ 0.67
GPC3-201ENST00000370818 ADAMTS12P58397 1594 aa19.2■□□□□ 0.66
GPC3-201ENST00000370818 SAMD9Q5K651 1589 aa19.2■□□□□ 0.66
GPC3-201ENST00000370818 CASKIN1Q8WXD9 1431 aa19.2■□□□□ 0.66
GPC3-201ENST00000370818 FYCO1Q9BQS8 1478 aa19.19■□□□□ 0.66
GPC3-201ENST00000370818 NEUROD1Q13562 356 aa19.19■□□□□ 0.66
GPC3-201ENST00000370818 CFAP43Q8NDM7 1665 aa19.17■□□□□ 0.66
GPC3-201ENST00000370818 CCNB3Q8WWL7 1395 aa19.17■□□□□ 0.66
GPC3-201ENST00000370818 FMN1Q68DA7 1419 aa19.17■□□□□ 0.66
GPC3-201ENST00000370818 THOC2Q8NI27 1593 aaKnown RBP19.16■□□□□ 0.66
GPC3-201ENST00000370818 SNAPC4Q5SXM2 1469 aa19.15■□□□□ 0.66
GPC3-201ENST00000370818 ATP1B4Q9UN42 357 aaPredicted RBP19.14■□□□□ 0.65
GPC3-201ENST00000370818 PHLDB1Q86UU1 1377 aa19.11■□□□□ 0.65
GPC3-201ENST00000370818 GTF3C3Q9Y5Q9 886 aa19.1■□□□□ 0.65
GPC3-201ENST00000370818 EIF4G3O43432 1585 aaKnown RBP19.09■□□□□ 0.65
GPC3-201ENST00000370818 IQGAP2Q13576 1575 aa19.08■□□□□ 0.65
GPC3-201ENST00000370818 GRIN2AQ12879 1464 aa19.01■□□□□ 0.63
GPC3-201ENST00000370818 LRRIQ1Q96JM4 1722 aa19■□□□□ 0.63
GPC3-201ENST00000370818 UGGT2Q9NYU1 1516 aa19■□□□□ 0.63
GPC3-201ENST00000370818 DHX57Q6P158 1386 aaKnown RBP18.99■□□□□ 0.63
GPC3-201ENST00000370818 ITGAEP38570 1179 aa18.99■□□□□ 0.63
GPC3-201ENST00000370818 KIAA0586Q9BVV6 1533 aa18.99■□□□□ 0.63
GPC3-201ENST00000370818 MAGI1Q96QZ7 1491 aaPredicted RBP18.99■□□□□ 0.63
GPC3-201ENST00000370818 MTUS2Q5JR59 1369 aa18.96■□□□□ 0.63
GPC3-201ENST00000370818 FAM50AQ14320 339 aaKnown RBP18.94■□□□□ 0.62
GPC3-201ENST00000370818 SYNJ2O15056 1496 aa18.94■□□□□ 0.62
GPC3-201ENST00000370818 CENPBP07199 599 aaPredicted RBP18.93■□□□□ 0.62
GPC3-201ENST00000370818 CLSPNQ9HAW4 1339 aa18.93■□□□□ 0.62
GPC3-201ENST00000370818 DISP1Q96F81 1524 aa18.92■□□□□ 0.62
GPC3-201ENST00000370818 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.92■□□□□ 0.62
GPC3-201ENST00000370818 CHMP7Q8WUX9 453 aaPredicted RBP18.91■□□□□ 0.62
GPC3-201ENST00000370818 CCDC18Q5T9S5 1454 aa18.91■□□□□ 0.62
GPC3-201ENST00000370818 RAB3GAP2Q9H2M9 1393 aa18.9■□□□□ 0.62
GPC3-201ENST00000370818 FGD6Q6ZV73 1430 aa18.9■□□□□ 0.62
GPC3-201ENST00000370818 KIAA0556O60303 1618 aa18.89■□□□□ 0.61
GPC3-201ENST00000370818 HECW1Q76N89 1606 aa18.89■□□□□ 0.61
GPC3-201ENST00000370818 MAGI3Q5TCQ9 1506 aa18.89■□□□□ 0.61
GPC3-201ENST00000370818 NCOA2Q15596 1464 aa18.89■□□□□ 0.61
GPC3-201ENST00000370818 EHBP1L1Q8N3D4 1523 aa18.89■□□□□ 0.61
GPC3-201ENST00000370818 CEP170Q5SW79 1584 aa18.88■□□□□ 0.61
GPC3-201ENST00000370818 EPRSP07814 1512 aaKnown RBP18.87■□□□□ 0.61
GPC3-201ENST00000370818 SETD5Q9C0A6 1442 aa18.86■□□□□ 0.61
GPC3-201ENST00000370818 NUP160Q12769 1436 aa18.85■□□□□ 0.61
GPC3-201ENST00000370818 FBLN2P98095 1184 aa18.85■□□□□ 0.61
GPC3-201ENST00000370818 ARHGEF11O15085 1522 aa18.84■□□□□ 0.61
GPC3-201ENST00000370818 MYOM3Q5VTT5 1437 aa18.84■□□□□ 0.61
GPC3-201ENST00000370818 SUPT6HQ7KZ85 1726 aaKnown RBP18.84■□□□□ 0.61
GPC3-201ENST00000370818 CDK13Q14004 1512 aaKnown RBP18.83■□□□□ 0.61
GPC3-201ENST00000370818 ZNF316A6NFI3 1004 aaPredicted RBP18.78■□□□□ 0.6
GPC3-201ENST00000370818 ARID3CA6NKF2 412 aa18.78■□□□□ 0.6
GPC3-201ENST00000370818 DIEXFQ68CQ4 756 aaKnown RBP18.78■□□□□ 0.6
GPC3-201ENST00000370818 NUP153P49790 1475 aaKnown RBP18.77■□□□□ 0.6
GPC3-201ENST00000370818 PTPRKQ15262 1439 aa18.77■□□□□ 0.6
GPC3-201ENST00000370818 MAPKBP1O60336 1514 aa18.76■□□□□ 0.59
GPC3-201ENST00000370818 JPH4Q96JJ6 628 aa18.76■□□□□ 0.59
GPC3-201ENST00000370818 RAPGEF6Q8TEU7 1601 aa18.74■□□□□ 0.59
GPC3-201ENST00000370818 PTPN23Q9H3S7 1636 aa18.73■□□□□ 0.59
GPC3-201ENST00000370818 CARMIL2Q6F5E8 1435 aa18.71■□□□□ 0.59
GPC3-201ENST00000370818 TCOF1Q13428 1488 aaKnown RBP18.7■□□□□ 0.58
GPC3-201ENST00000370818 PLB1Q6P1J6 1458 aa18.7■□□□□ 0.58
GPC3-201ENST00000370818 HFM1A2PYH4 1435 aa18.69■□□□□ 0.58
GPC3-201ENST00000370818 MIA2Q96PC5 1412 aa18.67■□□□□ 0.58
GPC3-201ENST00000370818 NAIPQ13075 1403 aa18.65■□□□□ 0.58
GPC3-201ENST00000370818 CDK11AQ9UQ88 783 aaPredicted RBP18.63■□□□□ 0.57
GPC3-201ENST00000370818 PRG4Q92954 1404 aaPredicted RBP18.61■□□□□ 0.57
GPC3-201ENST00000370818 TROQ12816 1431 aaPredicted RBP18.6■□□□□ 0.57
GPC3-201ENST00000370818 ABCA8O94911 1581 aa18.59■□□□□ 0.57
GPC3-201ENST00000370818 SIN3AQ96ST3 1273 aa18.58■□□□□ 0.56
GPC3-201ENST00000370818 CHD1O14646 1710 aa18.58■□□□□ 0.56
GPC3-201ENST00000370818 UACAQ9BZF9 1416 aa18.57■□□□□ 0.56
GPC3-201ENST00000370818 CHIC2Q9UKJ5 165 aa18.56■□□□□ 0.56
GPC3-201ENST00000370818 AKNAQ7Z591 1439 aa18.55■□□□□ 0.56
GPC3-201ENST00000370818 RRP7BPQ9NSQ0 103 aa18.55■□□□□ 0.56
GPC3-201ENST00000370818 ZNF644Q9H582 1327 aaPredicted RBP18.53■□□□□ 0.56
GPC3-201ENST00000370818 ATP10BO94823 1461 aa18.52■□□□□ 0.56
GPC3-201ENST00000370818 KIF14Q15058 1648 aa18.51■□□□□ 0.55
GPC3-201ENST00000370818 ADCY10Q96PN6 1610 aa18.51■□□□□ 0.55
GPC3-201ENST00000370818 GCC2Q8IWJ2 1684 aa18.51■□□□□ 0.55
GPC3-201ENST00000370818 PTPRGP23470 1445 aa18.51■□□□□ 0.55
GPC3-201ENST00000370818 DAPK1P53355 1430 aa18.51■□□□□ 0.55
GPC3-201ENST00000370818 GPATCH8Q9UKJ3 1502 aaKnown RBP18.5■□□□□ 0.55
GPC3-201ENST00000370818 ABCC5O15440 1437 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms