RNA–Protein interactions for RNA: ENST00000359794.9

PFKM-203, Transcript of phosphofructokinase, muscle, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFKM, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-203ENST00000359794 PRXQ9BXM0 1461 aa13.58□□□□□ -0.24
PFKM-203ENST00000359794 ANP32EQ9BTT0 268 aa13.58□□□□□ -0.24
PFKM-203ENST00000359794 IFT140Q96RY7 1462 aa13.57□□□□□ -0.24
PFKM-203ENST00000359794 TSHZ2Q9NRE2 1034 aa13.54□□□□□ -0.24
PFKM-203ENST00000359794 GOLGA3Q08378 1498 aa13.54□□□□□ -0.24
PFKM-203ENST00000359794 EIF4G3O43432 1585 aaKnown RBP13.53□□□□□ -0.24
PFKM-203ENST00000359794 CSRNP3Q8WYN3 585 aa13.52□□□□□ -0.25
PFKM-203ENST00000359794 IGF1RP08069 1367 aa13.49□□□□□ -0.25
PFKM-203ENST00000359794 ADAMTS12P58397 1594 aa13.49□□□□□ -0.25
PFKM-203ENST00000359794 GAPVD1Q14C86 1478 aa13.48□□□□□ -0.25
PFKM-203ENST00000359794 CLSPNQ9HAW4 1339 aa13.48□□□□□ -0.25
PFKM-203ENST00000359794 RAPGEF2Q9Y4G8 1499 aa13.48□□□□□ -0.25
PFKM-203ENST00000359794 CTTNBP2Q8WZ74 1663 aa13.47□□□□□ -0.25
PFKM-203ENST00000359794 TNIKQ9UKE5 1360 aa13.45□□□□□ -0.26
PFKM-203ENST00000359794 ZNF608Q9ULD9 1512 aaPredicted RBP13.44□□□□□ -0.26
PFKM-203ENST00000359794 BCANQ96GW7 911 aa13.42□□□□□ -0.26
PFKM-203ENST00000359794 GRIN2BQ13224 1484 aa13.42□□□□□ -0.26
PFKM-203ENST00000359794 TDRD9Q8NDG6 1382 aaKnown RBP13.39□□□□□ -0.27
PFKM-203ENST00000359794 CARMIL1Q5VZK9 1371 aa13.38□□□□□ -0.27
PFKM-203ENST00000359794 AQRO60306 1485 aaKnown RBP eCLIP13.38□□□□□ -0.271e-6■■■■■ 33.8
PFKM-203ENST00000359794 MAGI1Q96QZ7 1491 aaPredicted RBP13.37□□□□□ -0.27
PFKM-203ENST00000359794 FHAD1B1AJZ9 1412 aa13.35□□□□□ -0.27
PFKM-203ENST00000359794 APLP2Q06481 763 aa13.34□□□□□ -0.27
PFKM-203ENST00000359794 SNAPC4Q5SXM2 1469 aa13.33□□□□□ -0.28
PFKM-203ENST00000359794 SAMD9Q5K651 1589 aa13.3□□□□□ -0.28
PFKM-203ENST00000359794 KCNH8Q96L42 1107 aa13.29□□□□□ -0.28
PFKM-203ENST00000359794 CHD1O14646 1710 aa13.29□□□□□ -0.28
PFKM-203ENST00000359794 SYNJ2O15056 1496 aa13.29□□□□□ -0.28
PFKM-203ENST00000359794 FKBP8Q14318 412 aa13.28□□□□□ -0.28
PFKM-203ENST00000359794 GRIN2AQ12879 1464 aa13.27□□□□□ -0.28
PFKM-203ENST00000359794 EFCAB5A4FU69 1503 aa13.27□□□□□ -0.28
PFKM-203ENST00000359794 CEP170Q5SW79 1584 aa13.26□□□□□ -0.29
PFKM-203ENST00000359794 ARAP1Q96P48 1450 aa13.25□□□□□ -0.29
PFKM-203ENST00000359794 IQGAP2Q13576 1575 aa13.24□□□□□ -0.29
PFKM-203ENST00000359794 CLIP1P30622 1438 aa13.24□□□□□ -0.29
PFKM-203ENST00000359794 ARHGAP35Q9NRY4 1499 aa13.24□□□□□ -0.29
PFKM-203ENST00000359794 RBM19Q9Y4C8 960 aaKnown RBP13.23□□□□□ -0.29
PFKM-203ENST00000359794 DHX57Q6P158 1386 aaKnown RBP13.22□□□□□ -0.29
PFKM-203ENST00000359794 NUP160Q12769 1436 aa13.22□□□□□ -0.29
PFKM-203ENST00000359794 UGGT2Q9NYU1 1516 aa13.21□□□□□ -0.29
PFKM-203ENST00000359794 ITGAEP38570 1179 aa13.2□□□□□ -0.3
PFKM-203ENST00000359794 SHROOM2Q13796 1616 aa13.19□□□□□ -0.3
PFKM-203ENST00000359794 VPS8Q8N3P4 1428 aa13.18□□□□□ -0.3
PFKM-203ENST00000359794 KIAA0586Q9BVV6 1533 aa13.18□□□□□ -0.3
PFKM-203ENST00000359794 NEFLP07196 543 aa13.17□□□□□ -0.3
PFKM-203ENST00000359794 KIAA0556O60303 1618 aa13.15□□□□□ -0.3
PFKM-203ENST00000359794 CFAP43Q8NDM7 1665 aa13.14□□□□□ -0.31
PFKM-203ENST00000359794 CLASP1Q7Z460 1538 aa13.14□□□□□ -0.31
PFKM-203ENST00000359794 LRRIQ1Q96JM4 1722 aa13.13□□□□□ -0.31
PFKM-203ENST00000359794 PCF11O94913 1555 aaKnown RBP13.11□□□□□ -0.31
PFKM-203ENST00000359794 DISP1Q96F81 1524 aa13.11□□□□□ -0.31
PFKM-203ENST00000359794 MSH5O43196 834 aa13.11□□□□□ -0.31
PFKM-203ENST00000359794 MAP3K1Q13233 1512 aa13.1□□□□□ -0.31
PFKM-203ENST00000359794 ERICH6Q7L0X2 663 aa13.09□□□□□ -0.31
PFKM-203ENST00000359794 TRIM52Q96A61 297 aa13.09□□□□□ -0.31
PFKM-203ENST00000359794 DDX10Q13206 875 aaKnown RBP13.08□□□□□ -0.32
PFKM-203ENST00000359794 FYCO1Q9BQS8 1478 aa13.07□□□□□ -0.32
PFKM-203ENST00000359794 KANK4Q5T7N3 995 aaPredicted RBP13.05□□□□□ -0.32
PFKM-203ENST00000359794 TIAM1Q13009 1591 aa13.04□□□□□ -0.32
PFKM-203ENST00000359794 FHOD3Q2V2M9 1422 aa13.04□□□□□ -0.32
PFKM-203ENST00000359794 ATP1B4Q9UN42 357 aaPredicted RBP13.03□□□□□ -0.32
PFKM-203ENST00000359794 CASKIN1Q8WXD9 1431 aa13.03□□□□□ -0.32
PFKM-203ENST00000359794 FMN1Q68DA7 1419 aa13.02□□□□□ -0.33
PFKM-203ENST00000359794 CHMP7Q8WUX9 453 aaPredicted RBP13.02□□□□□ -0.33
PFKM-203ENST00000359794 HECW1Q76N89 1606 aa13.02□□□□□ -0.33
PFKM-203ENST00000359794 PRKCSHP14314 528 aaPredicted RBP13.01□□□□□ -0.33
PFKM-203ENST00000359794 RAPGEF6Q8TEU7 1601 aa13□□□□□ -0.33
PFKM-203ENST00000359794 HIRIP3Q9BW71 556 aaPredicted RBP12.99□□□□□ -0.33
PFKM-203ENST00000359794 IRX6P78412 446 aaPredicted RBP12.98□□□□□ -0.33
PFKM-203ENST00000359794 ABCA8O94911 1581 aa12.97□□□□□ -0.33
PFKM-203ENST00000359794 CDK11AQ9UQ88 783 aaPredicted RBP12.95□□□□□ -0.34
PFKM-203ENST00000359794 P3H3Q8IVL6 736 aa12.95□□□□□ -0.34
PFKM-203ENST00000359794 FANCIQ9NVI1 1328 aa12.94□□□□□ -0.34
PFKM-203ENST00000359794 CCDC18Q5T9S5 1454 aa12.94□□□□□ -0.34
PFKM-203ENST00000359794 ERCC6L2Q5T890 1561 aa12.94□□□□□ -0.34
PFKM-203ENST00000359794 ANP32CO43423 234 aa12.94□□□□□ -0.34
PFKM-203ENST00000359794 CARMIL2Q6F5E8 1435 aa12.93□□□□□ -0.34
PFKM-203ENST00000359794 CCNB3Q8WWL7 1395 aa12.92□□□□□ -0.34
PFKM-203ENST00000359794 RRBP1Q9P2E9 1410 aaKnown RBP12.91□□□□□ -0.34
PFKM-203ENST00000359794 DEKP35659 375 aaKnown RBP12.91□□□□□ -0.34
PFKM-203ENST00000359794 SIN3AQ96ST3 1273 aa12.91□□□□□ -0.34
PFKM-203ENST00000359794 RAB3GAP2Q9H2M9 1393 aa12.91□□□□□ -0.34
PFKM-203ENST00000359794 LRRC9Q6ZRR7 1453 aa12.91□□□□□ -0.34
PFKM-203ENST00000359794 PPP1R15AO75807 674 aaPredicted RBP12.9□□□□□ -0.34
PFKM-203ENST00000359794 PRG4Q92954 1404 aaPredicted RBP12.9□□□□□ -0.34
PFKM-203ENST00000359794 ADCY10Q96PN6 1610 aa12.9□□□□□ -0.34
PFKM-203ENST00000359794 MAPKBP1O60336 1514 aa12.9□□□□□ -0.34
PFKM-203ENST00000359794 NUP153P49790 1475 aaKnown RBP12.9□□□□□ -0.34
PFKM-203ENST00000359794 JPH4Q96JJ6 628 aa12.9□□□□□ -0.34
PFKM-203ENST00000359794 FBLN2P98095 1184 aa12.89□□□□□ -0.35
PFKM-203ENST00000359794 FAM50AQ14320 339 aaKnown RBP12.89□□□□□ -0.35
PFKM-203ENST00000359794 EPRSP07814 1512 aaKnown RBP12.89□□□□□ -0.35
PFKM-203ENST00000359794 EHBP1L1Q8N3D4 1523 aa12.89□□□□□ -0.35
PFKM-203ENST00000359794 ARHGEF11O15085 1522 aa12.88□□□□□ -0.35
PFKM-203ENST00000359794 MAGI3Q5TCQ9 1506 aa12.88□□□□□ -0.35
PFKM-203ENST00000359794 CCER2I3L3R5 266 aa12.88□□□□□ -0.35
PFKM-203ENST00000359794 SUPT6HQ7KZ85 1726 aaKnown RBP12.86□□□□□ -0.35
PFKM-203ENST00000359794 HNRNPUQ00839 825 aaKnown RBP eCLIP12.85□□□□□ -0.35
PFKM-203ENST00000359794 UHRF1BP1LA0JNW5 1464 aa12.84□□□□□ -0.35
PFKM-203ENST00000359794 NBR1Q14596 966 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 224.1 ms