RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 CHMP7Q8WUX9 453 aaPredicted RBP20.61■□□□□ 0.89
NFIX-201ENST00000358552 GRIN2AQ12879 1464 aa20.6■□□□□ 0.89
NFIX-201ENST00000358552 PCGF6Q9BYE7 350 aa20.59■□□□□ 0.89
NFIX-201ENST00000358552 CTTNBP2Q8WZ74 1663 aa20.59■□□□□ 0.89
NFIX-201ENST00000358552 EFCAB5A4FU69 1503 aa20.58■□□□□ 0.89
NFIX-201ENST00000358552 CHD1O14646 1710 aa20.58■□□□□ 0.89
NFIX-201ENST00000358552 ARHGAP35Q9NRY4 1499 aa20.57■□□□□ 0.88
NFIX-201ENST00000358552 HRCP23327 699 aa20.57■□□□□ 0.88
NFIX-201ENST00000358552 FBLN2P98095 1184 aa20.56■□□□□ 0.88
NFIX-201ENST00000358552 ARAP1Q96P48 1450 aa20.55■□□□□ 0.88
NFIX-201ENST00000358552 RANGAP1P46060 587 aaPredicted RBP20.53■□□□□ 0.88
NFIX-201ENST00000358552 NUP160Q12769 1436 aa20.48■□□□□ 0.87
NFIX-201ENST00000358552 CEP170Q5SW79 1584 aa20.48■□□□□ 0.87
NFIX-201ENST00000358552 KIAA0586Q9BVV6 1533 aa20.45■□□□□ 0.86
NFIX-201ENST00000358552 IQGAP2Q13576 1575 aa20.44■□□□□ 0.86
NFIX-201ENST00000358552 MAP3K1Q13233 1512 aa20.44■□□□□ 0.86
NFIX-201ENST00000358552 FMN1Q68DA7 1419 aa20.44■□□□□ 0.86
NFIX-201ENST00000358552 SAMD9Q5K651 1589 aa20.39■□□□□ 0.85
NFIX-201ENST00000358552 UGGT2Q9NYU1 1516 aa20.35■□□□□ 0.85
NFIX-201ENST00000358552 CASKIN1Q8WXD9 1431 aa20.34■□□□□ 0.85
NFIX-201ENST00000358552 FYCO1Q9BQS8 1478 aa20.33■□□□□ 0.85
NFIX-201ENST00000358552 PPARGC1BQ86YN6 1023 aaKnown RBP20.33■□□□□ 0.84
NFIX-201ENST00000358552 CLASP1Q7Z460 1538 aa20.31■□□□□ 0.84
NFIX-201ENST00000358552 FHOD3Q2V2M9 1422 aa20.31■□□□□ 0.84
NFIX-201ENST00000358552 JPH4Q96JJ6 628 aa20.3■□□□□ 0.84
NFIX-201ENST00000358552 OSCARQ8IYS5 282 aa20.3■□□□□ 0.84
NFIX-201ENST00000358552 SHROOM2Q13796 1616 aa20.29■□□□□ 0.84
NFIX-201ENST00000358552 P3H3Q8IVL6 736 aa20.27■□□□□ 0.84
NFIX-201ENST00000358552 DISP1Q96F81 1524 aa20.24■□□□□ 0.83
NFIX-201ENST00000358552 TIAM1Q13009 1591 aa20.24■□□□□ 0.83
NFIX-201ENST00000358552 KIAA0556O60303 1618 aa20.23■□□□□ 0.83
NFIX-201ENST00000358552 CARMIL2Q6F5E8 1435 aa20.22■□□□□ 0.83
NFIX-201ENST00000358552 PCF11O94913 1555 aaKnown RBP20.2■□□□□ 0.82
NFIX-201ENST00000358552 PRG4Q92954 1404 aaPredicted RBP20.18■□□□□ 0.82
NFIX-201ENST00000358552 LRRC9Q6ZRR7 1453 aa20.18■□□□□ 0.82
NFIX-201ENST00000358552 KANK4Q5T7N3 995 aaPredicted RBP20.17■□□□□ 0.82
NFIX-201ENST00000358552 CCDC18Q5T9S5 1454 aa20.17■□□□□ 0.82
NFIX-201ENST00000358552 CFAP43Q8NDM7 1665 aa20.16■□□□□ 0.82
NFIX-201ENST00000358552 TTBK1Q5TCY1 1321 aaPredicted RBP20.14■□□□□ 0.82
NFIX-201ENST00000358552 ATP1B4Q9UN42 357 aaPredicted RBP20.14■□□□□ 0.81
NFIX-201ENST00000358552 ZEB1P37275 1124 aaPredicted RBP20.13■□□□□ 0.81
NFIX-201ENST00000358552 HECW1Q76N89 1606 aa20.12■□□□□ 0.81
NFIX-201ENST00000358552 RRBP1Q9P2E9 1410 aaKnown RBP20.1■□□□□ 0.81
NFIX-201ENST00000358552 ERCC6L2Q5T890 1561 aa20.1■□□□□ 0.81
NFIX-201ENST00000358552 MTUS2Q5JR59 1369 aa20.06■□□□□ 0.8
NFIX-201ENST00000358552 CDK11AQ9UQ88 783 aaPredicted RBP20.05■□□□□ 0.8
NFIX-201ENST00000358552 CCNB3Q8WWL7 1395 aa20.04■□□□□ 0.8
NFIX-201ENST00000358552 PTPRGP23470 1445 aa20.03■□□□□ 0.8
NFIX-201ENST00000358552 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.02■□□□□ 0.8
NFIX-201ENST00000358552 EPRSP07814 1512 aaKnown RBP20.02■□□□□ 0.79
NFIX-201ENST00000358552 EHBP1L1Q8N3D4 1523 aa20.02■□□□□ 0.79
NFIX-201ENST00000358552 RAPGEF6Q8TEU7 1601 aa20■□□□□ 0.79
NFIX-201ENST00000358552 LRRIQ1Q96JM4 1722 aa19.98■□□□□ 0.79
NFIX-201ENST00000358552 ABCA8O94911 1581 aa19.97■□□□□ 0.79
NFIX-201ENST00000358552 PLB1Q6P1J6 1458 aa19.97■□□□□ 0.79
NFIX-201ENST00000358552 ARHGEF11O15085 1522 aa19.95■□□□□ 0.78
NFIX-201ENST00000358552 SUPT6HQ7KZ85 1726 aaKnown RBP19.94■□□□□ 0.78
NFIX-201ENST00000358552 PHLDB1Q86UU1 1377 aa19.92■□□□□ 0.78
NFIX-201ENST00000358552 NUP153P49790 1475 aaKnown RBP19.91■□□□□ 0.78
NFIX-201ENST00000358552 UACAQ9BZF9 1416 aa19.91■□□□□ 0.78
NFIX-201ENST00000358552 RIMBP3CA6NJZ7 1639 aa19.9■□□□□ 0.78
NFIX-201ENST00000358552 RIMBP3BA6NNM3 1639 aa19.9■□□□□ 0.78
NFIX-201ENST00000358552 RIMBP3Q9UFD9 1639 aa19.9■□□□□ 0.78
NFIX-201ENST00000358552 HNRNPUL2Q1KMD3 747 aaKnown RBP19.9■□□□□ 0.78
NFIX-201ENST00000358552 NCOA2Q15596 1464 aa19.89■□□□□ 0.77
NFIX-201ENST00000358552 ABCC2Q92887 1545 aa19.87■□□□□ 0.77
NFIX-201ENST00000358552 MYOM3Q5VTT5 1437 aa19.87■□□□□ 0.77
NFIX-201ENST00000358552 UHRF1BP1LA0JNW5 1464 aa19.87■□□□□ 0.77
NFIX-201ENST00000358552 FGD6Q6ZV73 1430 aa19.85■□□□□ 0.77
NFIX-201ENST00000358552 CCER1Q8TC90 406 aaPredicted RBP19.85■□□□□ 0.77
NFIX-201ENST00000358552 MIA2Q96PC5 1412 aa19.85■□□□□ 0.77
NFIX-201ENST00000358552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.84■□□□□ 0.77
NFIX-201ENST00000358552 CDK13Q14004 1512 aaKnown RBP19.84■□□□□ 0.77
NFIX-201ENST00000358552 TROQ12816 1431 aaPredicted RBP19.83■□□□□ 0.76
NFIX-201ENST00000358552 PLEKHD1A6NEE1 506 aa19.82■□□□□ 0.76
NFIX-201ENST00000358552 ADCY10Q96PN6 1610 aa19.82■□□□□ 0.76
NFIX-201ENST00000358552 ATP10BO94823 1461 aa19.81■□□□□ 0.76
NFIX-201ENST00000358552 ARID3CA6NKF2 412 aa19.8■□□□□ 0.76
NFIX-201ENST00000358552 FAM50AQ14320 339 aaKnown RBP19.79■□□□□ 0.76
NFIX-201ENST00000358552 DNAJC5Q9H3Z4 198 aa19.79■□□□□ 0.76
NFIX-201ENST00000358552 MAGI3Q5TCQ9 1506 aa19.79■□□□□ 0.76
NFIX-201ENST00000358552 CLSPNQ9HAW4 1339 aa19.79■□□□□ 0.76
NFIX-201ENST00000358552 KDM5BQ9UGL1 1544 aa19.77■□□□□ 0.76
NFIX-201ENST00000358552 ZCCHC11Q5TAX3 1644 aaKnown RBP19.76■□□□□ 0.75
NFIX-201ENST00000358552 ACIN1Q9UKV3 1341 aaKnown RBP19.76■□□□□ 0.75
NFIX-201ENST00000358552 TCOF1Q13428 1488 aaKnown RBP19.75■□□□□ 0.75
NFIX-201ENST00000358552 CYB5RLQ6IPT4 315 aa19.74■□□□□ 0.75
NFIX-201ENST00000358552 PTPN23Q9H3S7 1636 aa19.7■□□□□ 0.74
NFIX-201ENST00000358552 SETD5Q9C0A6 1442 aa19.69■□□□□ 0.74
NFIX-201ENST00000358552 ITGAEP38570 1179 aa19.68■□□□□ 0.74
NFIX-201ENST00000358552 NPM1P06748 294 aaKnown RBP eCLIP19.66■□□□□ 0.74
NFIX-201ENST00000358552 KIF14Q15058 1648 aa19.66■□□□□ 0.74
NFIX-201ENST00000358552 ITSN2Q9NZM3 1697 aa19.66■□□□□ 0.74
NFIX-201ENST00000358552 CFDP1Q9UEE9 299 aaPredicted RBP19.63■□□□□ 0.73
NFIX-201ENST00000358552 AKNAQ7Z591 1439 aa19.63■□□□□ 0.73
NFIX-201ENST00000358552 GPATCH8Q9UKJ3 1502 aaKnown RBP19.61■□□□□ 0.73
NFIX-201ENST00000358552 HFM1A2PYH4 1435 aa19.6■□□□□ 0.73
NFIX-201ENST00000358552 RAB3GAP2Q9H2M9 1393 aa19.6■□□□□ 0.73
NFIX-201ENST00000358552 ABCC10Q5T3U5 1492 aa19.58■□□□□ 0.73
NFIX-201ENST00000358552 WDR7Q9Y4E6 1490 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms