RNA–Protein interactions for RNA: ENST00000346049.9

PTK2B-201, Transcript of protein tyrosine kinase 2 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTK2B, Length 4,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2B-201ENST00000346049 FKBP8Q14318 412 aa12.8□□□□□ -0.36
PTK2B-201ENST00000346049 TOP2BQ02880 1626 aa12.8□□□□□ -0.36
PTK2B-201ENST00000346049 MTUS2Q5JR59 1369 aa12.78□□□□□ -0.36
PTK2B-201ENST00000346049 CARMIL1Q5VZK9 1371 aa12.78□□□□□ -0.36
PTK2B-201ENST00000346049 TDRD9Q8NDG6 1382 aaKnown RBP12.75□□□□□ -0.37
PTK2B-201ENST00000346049 DAXXQ9UER7 740 aaPredicted RBP12.75□□□□□ -0.37
PTK2B-201ENST00000346049 NBR1Q14596 966 aa12.73□□□□□ -0.37
PTK2B-201ENST00000346049 CLSPNQ9HAW4 1339 aa12.72□□□□□ -0.37
PTK2B-201ENST00000346049 FANCD2Q9BXW9 1451 aa12.72□□□□□ -0.37
PTK2B-201ENST00000346049 ERICH3Q5RHP9 1530 aa12.7□□□□□ -0.38
PTK2B-201ENST00000346049 CUX1P39880 1505 aa12.7□□□□□ -0.38
PTK2B-201ENST00000346049 PDS5BQ9NTI5 1447 aa12.7□□□□□ -0.38
PTK2B-201ENST00000346049 PRXQ9BXM0 1461 aa12.69□□□□□ -0.38
PTK2B-201ENST00000346049 CC2D2AQ9P2K1 1620 aa12.68□□□□□ -0.38
PTK2B-201ENST00000346049 IGF1RP08069 1367 aa12.68□□□□□ -0.38
PTK2B-201ENST00000346049 FHAD1B1AJZ9 1412 aa12.66□□□□□ -0.38
PTK2B-201ENST00000346049 FGD5Q6ZNL6 1462 aa12.66□□□□□ -0.38
PTK2B-201ENST00000346049 BIVM-ERCC5R4GMW8 1640 aa12.65□□□□□ -0.38
PTK2B-201ENST00000346049 RRP7BPQ9NSQ0 103 aa12.65□□□□□ -0.38
PTK2B-201ENST00000346049 KCNH8Q96L42 1107 aa12.64□□□□□ -0.39
PTK2B-201ENST00000346049 SLC4A1APQ9BWU0 796 aaKnown RBP12.64□□□□□ -0.39
PTK2B-201ENST00000346049 DDX10Q13206 875 aaKnown RBP12.63□□□□□ -0.39
PTK2B-201ENST00000346049 HIRIP3Q9BW71 556 aaPredicted RBP12.63□□□□□ -0.39
PTK2B-201ENST00000346049 SUPT16HQ9Y5B9 1047 aaKnown RBP12.63□□□□□ -0.39
PTK2B-201ENST00000346049 RTN4Q9NQC3 1192 aaKnown RBP12.62□□□□□ -0.39
PTK2B-201ENST00000346049 KANK4Q5T7N3 995 aaPredicted RBP12.62□□□□□ -0.39
PTK2B-201ENST00000346049 NPM1P06748 294 aaKnown RBP eCLIP12.62□□□□□ -0.39
PTK2B-201ENST00000346049 PRKCSHP14314 528 aaPredicted RBP12.62□□□□□ -0.39
PTK2B-201ENST00000346049 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.6□□□□□ -0.392e-7■■■■□ 24.1
PTK2B-201ENST00000346049 CCNB3Q8WWL7 1395 aa12.59□□□□□ -0.39
PTK2B-201ENST00000346049 TONSLQ96HA7 1378 aa12.59□□□□□ -0.39
PTK2B-201ENST00000346049 PLEKHD1A6NEE1 506 aa12.58□□□□□ -0.4
PTK2B-201ENST00000346049 ANP32CO43423 234 aa12.57□□□□□ -0.4
PTK2B-201ENST00000346049 TSPY4P0CV99 314 aa12.57□□□□□ -0.4
PTK2B-201ENST00000346049 TSPY10P0CW01 314 aa12.57□□□□□ -0.4
PTK2B-201ENST00000346049 TSHZ2Q9NRE2 1034 aa12.56□□□□□ -0.4
PTK2B-201ENST00000346049 ANP32AP39687 249 aaKnown RBP12.55□□□□□ -0.4
PTK2B-201ENST00000346049 DNAJC5BQ9UF47 199 aa12.54□□□□□ -0.4
PTK2B-201ENST00000346049 RAD54L2Q9Y4B4 1467 aa12.53□□□□□ -0.4
PTK2B-201ENST00000346049 CFDP1Q9UEE9 299 aaPredicted RBP12.53□□□□□ -0.4
PTK2B-201ENST00000346049 NPM2Q86SE8 214 aaKnown RBP12.53□□□□□ -0.4
PTK2B-201ENST00000346049 NESP48681 1621 aa12.52□□□□□ -0.4
PTK2B-201ENST00000346049 ARAP1Q96P48 1450 aa12.52□□□□□ -0.4
PTK2B-201ENST00000346049 IRX6P78412 446 aaPredicted RBP12.52□□□□□ -0.4
PTK2B-201ENST00000346049 TOPBP1Q92547 1522 aa12.52□□□□□ -0.41
PTK2B-201ENST00000346049 GLIPR1L2Q4G1C9 344 aa12.52□□□□□ -0.41
PTK2B-201ENST00000346049 FMN1Q68DA7 1419 aa12.51□□□□□ -0.41
PTK2B-201ENST00000346049 DNMBPQ6XZF7 1577 aa12.51□□□□□ -0.41
PTK2B-201ENST00000346049 DEKP35659 375 aaKnown RBP12.51□□□□□ -0.41
PTK2B-201ENST00000346049 ARHGAP35Q9NRY4 1499 aa12.51□□□□□ -0.41
PTK2B-201ENST00000346049 FHOD3Q2V2M9 1422 aa12.5□□□□□ -0.41
PTK2B-201ENST00000346049 CHGAP10645 457 aaKnown RBP12.5□□□□□ -0.41
PTK2B-201ENST00000346049 POLA1P09884 1462 aaPredicted RBP12.49□□□□□ -0.41
PTK2B-201ENST00000346049 RBM19Q9Y4C8 960 aaKnown RBP12.48□□□□□ -0.41
PTK2B-201ENST00000346049 LAMC3Q9Y6N6 1575 aa12.48□□□□□ -0.41
PTK2B-201ENST00000346049 KDM2AQ9Y2K7 1162 aa12.47□□□□□ -0.41
PTK2B-201ENST00000346049 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.47□□□□□ -0.41
PTK2B-201ENST00000346049 ABCA10Q8WWZ4 1543 aa12.47□□□□□ -0.41
PTK2B-201ENST00000346049 GAPVD1Q14C86 1478 aa12.47□□□□□ -0.41
PTK2B-201ENST00000346049 SIN3AQ96ST3 1273 aa12.47□□□□□ -0.41
PTK2B-201ENST00000346049 PLPPR3Q6T4P5 718 aa12.46□□□□□ -0.41
PTK2B-201ENST00000346049 CCDC136Q96JN2 1154 aa12.46□□□□□ -0.41
PTK2B-201ENST00000346049 HNRNPUQ00839 825 aaKnown RBP eCLIP12.45□□□□□ -0.42
PTK2B-201ENST00000346049 ZBTB47Q9UFB7 747 aaPredicted RBP12.43□□□□□ -0.42
PTK2B-201ENST00000346049 SETD5Q9C0A6 1442 aa12.42□□□□□ -0.42
PTK2B-201ENST00000346049 SENP3Q9H4L4 574 aaPredicted RBP12.42□□□□□ -0.42
PTK2B-201ENST00000346049 RRBP1Q9P2E9 1410 aaKnown RBP12.41□□□□□ -0.42
PTK2B-201ENST00000346049 PRDM2Q13029 1718 aa12.4□□□□□ -0.42
PTK2B-201ENST00000346049 DHX57Q6P158 1386 aaKnown RBP12.39□□□□□ -0.43
PTK2B-201ENST00000346049 LRRC9Q6ZRR7 1453 aa12.39□□□□□ -0.43
PTK2B-201ENST00000346049 EFCAB5A4FU69 1503 aa12.39□□□□□ -0.43
PTK2B-201ENST00000346049 RGL3Q3MIN7 710 aa12.39□□□□□ -0.43
PTK2B-201ENST00000346049 AQRO60306 1485 aaKnown RBP eCLIP12.38□□□□□ -0.437e-7■■■■□ 21.3
PTK2B-201ENST00000346049 SENP3-EIF4A1A0A087X0R7 540 aa12.38□□□□□ -0.43
PTK2B-201ENST00000346049 JPH4Q96JJ6 628 aa12.38□□□□□ -0.43
PTK2B-201ENST00000346049 RAB3GAP2Q9H2M9 1393 aa12.38□□□□□ -0.43
PTK2B-201ENST00000346049 CASKIN1Q8WXD9 1431 aa12.37□□□□□ -0.43
PTK2B-201ENST00000346049 TIMELESSQ9UNS1 1208 aa12.37□□□□□ -0.43
PTK2B-201ENST00000346049 ESF1Q9H501 851 aaKnown RBP12.37□□□□□ -0.43
PTK2B-201ENST00000346049 FAM9BQ8IZU0 186 aa12.37□□□□□ -0.43
PTK2B-201ENST00000346049 MAP3K1Q13233 1512 aa12.37□□□□□ -0.43
PTK2B-201ENST00000346049 CARMIL2Q6F5E8 1435 aa12.36□□□□□ -0.43
PTK2B-201ENST00000346049 URB2Q14146 1524 aaKnown RBP12.35□□□□□ -0.43
PTK2B-201ENST00000346049 CUL7Q14999 1698 aa12.35□□□□□ -0.43
PTK2B-201ENST00000346049 STAG3Q9UJ98 1225 aa12.35□□□□□ -0.43
PTK2B-201ENST00000346049 FYCO1Q9BQS8 1478 aa12.35□□□□□ -0.43
PTK2B-201ENST00000346049 TIAM1Q13009 1591 aa12.33□□□□□ -0.44
PTK2B-201ENST00000346049 MRC2Q9UBG0 1479 aa12.33□□□□□ -0.44
PTK2B-201ENST00000346049 ANO8Q9HCE9 1232 aaPredicted RBP12.33□□□□□ -0.44
PTK2B-201ENST00000346049 FOXD1Q16676 465 aa12.32□□□□□ -0.44
PTK2B-201ENST00000346049 PHLDB1Q86UU1 1377 aa12.32□□□□□ -0.44
PTK2B-201ENST00000346049 GRIN2BQ13224 1484 aa12.31□□□□□ -0.44
PTK2B-201ENST00000346049 EIF4G2P78344 907 aaKnown RBP eCLIP12.29□□□□□ -0.44
PTK2B-201ENST00000346049 ARXQ96QS3 562 aa12.29□□□□□ -0.44
PTK2B-201ENST00000346049 NOP58Q9Y2X3 529 aaKnown RBP12.28□□□□□ -0.44
PTK2B-201ENST00000346049 IFT140Q96RY7 1462 aa12.28□□□□□ -0.44
PTK2B-201ENST00000346049 NEFMP07197 916 aa12.27□□□□□ -0.45
PTK2B-201ENST00000346049 SALL2Q9Y467 1007 aaPredicted RBP12.26□□□□□ -0.45
PTK2B-201ENST00000346049 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.25□□□□□ -0.45
PTK2B-201ENST00000346049 FGD6Q6ZV73 1430 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms