RNA–Protein interactions for RNA: ENST00000346049.9

PTK2B-201, Transcript of protein tyrosine kinase 2 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTK2B, Length 4,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2B-201ENST00000346049 NISCHQ9Y2I1 1504 aa17.63■□□□□ 0.41
PTK2B-201ENST00000346049 DCAF8L2P0C7V8 631 aa16.35■□□□□ 0.21
PTK2B-201ENST00000346049 SHROOM4Q9ULL8 1493 aa15.64■□□□□ 0.09
PTK2B-201ENST00000346049 SUPT5HO00267 1087 aaKnown RBP15.52■□□□□ 0.08
PTK2B-201ENST00000346049 CCDC180Q9P1Z9 1646 aa14.96□□□□□ -0.01
PTK2B-201ENST00000346049 PELP1Q8IZL8 1130 aaKnown RBP14.87□□□□□ -0.03
PTK2B-201ENST00000346049 ZCCHC6Q5VYS8 1495 aaKnown RBP14.8□□□□□ -0.04
PTK2B-201ENST00000346049 EHMT2Q96KQ7 1210 aa14.79□□□□□ -0.04
PTK2B-201ENST00000346049 PCGF6Q9BYE7 350 aa14.62□□□□□ -0.07
PTK2B-201ENST00000346049 ABCC9O60706 1549 aa14.58□□□□□ -0.08
PTK2B-201ENST00000346049 MYT1Q01538 1121 aa14.56□□□□□ -0.08
PTK2B-201ENST00000346049 FAM9AQ8IZU1 332 aaPredicted RBP14.56□□□□□ -0.08
PTK2B-201ENST00000346049 DCAF1Q9Y4B6 1507 aa14.43□□□□□ -0.1
PTK2B-201ENST00000346049 HRCP23327 699 aa14.35□□□□□ -0.11
PTK2B-201ENST00000346049 TRIM41Q8WV44 630 aa14.34□□□□□ -0.11
PTK2B-201ENST00000346049 PABPN1Q86U42 306 aaKnown RBP eCLIP14.26□□□□□ -0.13
PTK2B-201ENST00000346049 CHIC1Q5VXU3 224 aa14.26□□□□□ -0.13
PTK2B-201ENST00000346049 PPARGC1BQ86YN6 1023 aaKnown RBP14.26□□□□□ -0.13
PTK2B-201ENST00000346049 TTBK1Q5TCY1 1321 aaPredicted RBP14.2□□□□□ -0.14
PTK2B-201ENST00000346049 RANGAP1P46060 587 aaPredicted RBP14.18□□□□□ -0.14
PTK2B-201ENST00000346049 CENPBP07199 599 aaPredicted RBP14.11□□□□□ -0.15
PTK2B-201ENST00000346049 SCRIBQ14160 1630 aa14.1□□□□□ -0.15
PTK2B-201ENST00000346049 MYO15BQ96JP2 1530 aa14.1□□□□□ -0.15
PTK2B-201ENST00000346049 LOC105371045A0A1W2PR82 267 aa14.09□□□□□ -0.15
PTK2B-201ENST00000346049 NACADO15069 1562 aa14.08□□□□□ -0.16
PTK2B-201ENST00000346049 APLP2Q06481 763 aa14.03□□□□□ -0.16
PTK2B-201ENST00000346049 UBTFP17480 764 aaKnown RBP14.02□□□□□ -0.17
PTK2B-201ENST00000346049 RB1CC1Q8TDY2 1594 aa13.94□□□□□ -0.18
PTK2B-201ENST00000346049 ZEB1P37275 1124 aaPredicted RBP13.94□□□□□ -0.18
PTK2B-201ENST00000346049 RSF1Q96T23 1441 aaPredicted RBP13.92□□□□□ -0.18
PTK2B-201ENST00000346049 YTHDC1Q96MU7 727 aaKnown RBP13.88□□□□□ -0.19
PTK2B-201ENST00000346049 TRIM26Q12899 539 aaPredicted RBP13.85□□□□□ -0.19
PTK2B-201ENST00000346049 ATP1B4Q9UN42 357 aaPredicted RBP13.85□□□□□ -0.19
PTK2B-201ENST00000346049 CCER1Q8TC90 406 aaPredicted RBP13.8□□□□□ -0.2
PTK2B-201ENST00000346049 CECR2Q9BXF3 1484 aa13.71□□□□□ -0.21
PTK2B-201ENST00000346049 ERICH6Q7L0X2 663 aa13.71□□□□□ -0.22
PTK2B-201ENST00000346049 GTF3C3Q9Y5Q9 886 aa13.7□□□□□ -0.22
PTK2B-201ENST00000346049 BAZ1AQ9NRL2 1556 aaPredicted RBP13.66□□□□□ -0.22
PTK2B-201ENST00000346049 SCAF1Q9H7N4 1312 aaKnown RBP13.64□□□□□ -0.23
PTK2B-201ENST00000346049 MROH2BQ7Z745 1585 aa13.63□□□□□ -0.23
PTK2B-201ENST00000346049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.59□□□□□ -0.23
PTK2B-201ENST00000346049 ACIN1Q9UKV3 1341 aaKnown RBP13.53□□□□□ -0.24
PTK2B-201ENST00000346049 ITGAEP38570 1179 aa13.5□□□□□ -0.25
PTK2B-201ENST00000346049 WIZO95785 1651 aa13.47□□□□□ -0.25
PTK2B-201ENST00000346049 HNRNPUL2Q1KMD3 747 aaKnown RBP13.45□□□□□ -0.26
PTK2B-201ENST00000346049 DIEXFQ68CQ4 756 aaKnown RBP13.45□□□□□ -0.26
PTK2B-201ENST00000346049 CSRNP3Q8WYN3 585 aa13.41□□□□□ -0.26
PTK2B-201ENST00000346049 TOP2AP11388 1531 aaKnown RBP13.4□□□□□ -0.26
PTK2B-201ENST00000346049 SMARCA4P51532 1647 aa13.39□□□□□ -0.27
PTK2B-201ENST00000346049 NEUROD1Q13562 356 aa13.38□□□□□ -0.27
PTK2B-201ENST00000346049 CCDC88BA6NC98 1476 aa13.38□□□□□ -0.27
PTK2B-201ENST00000346049 NEFLP07196 543 aa13.34□□□□□ -0.27
PTK2B-201ENST00000346049 BAZ1BQ9UIG0 1483 aaKnown RBP13.33□□□□□ -0.28
PTK2B-201ENST00000346049 EEA1Q15075 1411 aa13.31□□□□□ -0.28
PTK2B-201ENST00000346049 FBLN2P98095 1184 aa13.3□□□□□ -0.28
PTK2B-201ENST00000346049 P3H3Q8IVL6 736 aa13.3□□□□□ -0.28
PTK2B-201ENST00000346049 SMARCA2P51531 1590 aa13.27□□□□□ -0.29
PTK2B-201ENST00000346049 WRNQ14191 1432 aaPredicted RBP eCLIP13.26□□□□□ -0.29
PTK2B-201ENST00000346049 ATAD2BQ9ULI0 1458 aa13.23□□□□□ -0.29
PTK2B-201ENST00000346049 ARID3CA6NKF2 412 aa13.2□□□□□ -0.3
PTK2B-201ENST00000346049 FAM50AQ14320 339 aaKnown RBP13.2□□□□□ -0.3
PTK2B-201ENST00000346049 BCANQ96GW7 911 aa13.19□□□□□ -0.3
PTK2B-201ENST00000346049 ABCC8Q09428 1581 aa13.18□□□□□ -0.3
PTK2B-201ENST00000346049 BCL11AQ9H165 835 aa13.18□□□□□ -0.3
PTK2B-201ENST00000346049 BICRAQ9NZM4 1560 aa13.17□□□□□ -0.3
PTK2B-201ENST00000346049 TNIKQ9UKE5 1360 aa13.16□□□□□ -0.3
PTK2B-201ENST00000346049 UNC13AQ9UPW8 1703 aa13.14□□□□□ -0.31
PTK2B-201ENST00000346049 MYT1LQ9UL68 1186 aa13.14□□□□□ -0.31
PTK2B-201ENST00000346049 SOGA1O94964 1423 aa13.14□□□□□ -0.31
PTK2B-201ENST00000346049 GOLGA3Q08378 1498 aa13.13□□□□□ -0.31
PTK2B-201ENST00000346049 CEP162Q5TB80 1403 aa13.11□□□□□ -0.31
PTK2B-201ENST00000346049 CEP164Q9UPV0 1460 aa13.08□□□□□ -0.32
PTK2B-201ENST00000346049 PEG3Q9GZU2 1588 aa13.05□□□□□ -0.32
PTK2B-201ENST00000346049 ZNF316A6NFI3 1004 aaPredicted RBP13.05□□□□□ -0.32
PTK2B-201ENST00000346049 NCAPD3P42695 1498 aa13.03□□□□□ -0.32
PTK2B-201ENST00000346049 CLIP1P30622 1438 aa13.02□□□□□ -0.33
PTK2B-201ENST00000346049 ANP32EQ9BTT0 268 aa13.01□□□□□ -0.33
PTK2B-201ENST00000346049 RTL5Q5HYW3 569 aaPredicted RBP12.99□□□□□ -0.33
PTK2B-201ENST00000346049 TRIM52Q96A61 297 aa12.98□□□□□ -0.33
PTK2B-201ENST00000346049 KIF27Q86VH2 1401 aa12.98□□□□□ -0.33
PTK2B-201ENST00000346049 POLR3GLQ9BT43 218 aa12.97□□□□□ -0.33
PTK2B-201ENST00000346049 EIF4G1Q04637 1599 aaKnown RBP12.97□□□□□ -0.33
PTK2B-201ENST00000346049 RUSC2Q8N2Y8 1516 aa12.95□□□□□ -0.34
PTK2B-201ENST00000346049 CNGB1Q14028 1251 aaPredicted RBP12.95□□□□□ -0.34
PTK2B-201ENST00000346049 HMGXB3Q12766 1538 aa12.92□□□□□ -0.34
PTK2B-201ENST00000346049 MIER1Q8N108 512 aa12.91□□□□□ -0.34
PTK2B-201ENST00000346049 ZNF777Q9ULD5 760 aaPredicted RBP12.91□□□□□ -0.34
PTK2B-201ENST00000346049 EIF5BO60841 1220 aaKnown RBP12.9□□□□□ -0.34
PTK2B-201ENST00000346049 CADPSQ9ULU8 1353 aa12.9□□□□□ -0.34
PTK2B-201ENST00000346049 CHMP7Q8WUX9 453 aaPredicted RBP12.89□□□□□ -0.35
PTK2B-201ENST00000346049 SYNJ1O43426 1573 aa12.86□□□□□ -0.35
PTK2B-201ENST00000346049 VPS8Q8N3P4 1428 aa12.85□□□□□ -0.35
PTK2B-201ENST00000346049 CUX2O14529 1486 aa12.84□□□□□ -0.35
PTK2B-201ENST00000346049 CFTRP13569 1480 aa12.84□□□□□ -0.35
PTK2B-201ENST00000346049 RAPGEF2Q9Y4G8 1499 aa12.82□□□□□ -0.36
PTK2B-201ENST00000346049 ZNF326Q5BKZ1 582 aaKnown RBP12.81□□□□□ -0.36
PTK2B-201ENST00000346049 CDK11AQ9UQ88 783 aaPredicted RBP12.81□□□□□ -0.36
PTK2B-201ENST00000346049 ERCC6Q03468 1493 aa12.81□□□□□ -0.36
PTK2B-201ENST00000346049 CHIC2Q9UKJ5 165 aa12.8□□□□□ -0.36
PTK2B-201ENST00000346049 KIF21BO75037 1637 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms