RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 ZNF608Q9ULD9 1512 aaPredicted RBP39.12■■■■□ 3.85
TRADD-201ENST00000345057 ADAMTS12P58397 1594 aa39.12■■■■□ 3.85
TRADD-201ENST00000345057 EFCAB5A4FU69 1503 aa39.07■■■■□ 3.85
TRADD-201ENST00000345057 EIF4G3O43432 1585 aaKnown RBP39.07■■■■□ 3.84
TRADD-201ENST00000345057 MAGI1Q96QZ7 1491 aaPredicted RBP38.91■■■■□ 3.82
TRADD-201ENST00000345057 SNAPC4Q5SXM2 1469 aa38.89■■■■□ 3.82
TRADD-201ENST00000345057 SAMD9Q5K651 1589 aa38.8■■■■□ 3.8
TRADD-201ENST00000345057 TTBK1Q5TCY1 1321 aaPredicted RBP38.78■■■■□ 3.8
TRADD-201ENST00000345057 MAP3K1Q13233 1512 aa38.77■■■■□ 3.8
TRADD-201ENST00000345057 IQGAP2Q13576 1575 aa38.76■■■■□ 3.8
TRADD-201ENST00000345057 GRIN2AQ12879 1464 aa38.74■■■■□ 3.79
TRADD-201ENST00000345057 FHOD3Q2V2M9 1422 aa38.73■■■■□ 3.79
TRADD-201ENST00000345057 SYNJ2O15056 1496 aa38.73■■■■□ 3.79
TRADD-201ENST00000345057 FMN1Q68DA7 1419 aa38.73■■■■□ 3.79
TRADD-201ENST00000345057 HRCP23327 699 aa38.71■■■■□ 3.79
TRADD-201ENST00000345057 P3H3Q8IVL6 736 aa38.67■■■■□ 3.78
TRADD-201ENST00000345057 FYCO1Q9BQS8 1478 aa38.67■■■■□ 3.78
TRADD-201ENST00000345057 KIAA0586Q9BVV6 1533 aa38.65■■■■□ 3.78
TRADD-201ENST00000345057 PCF11O94913 1555 aaKnown RBP38.63■■■■□ 3.77
TRADD-201ENST00000345057 CASKIN1Q8WXD9 1431 aa38.63■■■■□ 3.77
TRADD-201ENST00000345057 TIAM1Q13009 1591 aa38.62■■■■□ 3.77
TRADD-201ENST00000345057 CHMP7Q8WUX9 453 aaPredicted RBP38.61■■■■□ 3.77
TRADD-201ENST00000345057 UGGT2Q9NYU1 1516 aa38.59■■■■□ 3.77
TRADD-201ENST00000345057 CFAP43Q8NDM7 1665 aa38.53■■■■□ 3.76
TRADD-201ENST00000345057 KANK4Q5T7N3 995 aaPredicted RBP38.52■■■■□ 3.76
TRADD-201ENST00000345057 NUP160Q12769 1436 aa38.45■■■■□ 3.75
TRADD-201ENST00000345057 LRRC9Q6ZRR7 1453 aa38.44■■■■□ 3.74
TRADD-201ENST00000345057 CEP170Q5SW79 1584 aa38.43■■■■□ 3.74
TRADD-201ENST00000345057 FBLN2P98095 1184 aa38.41■■■■□ 3.74
TRADD-201ENST00000345057 ATP1B4Q9UN42 357 aaPredicted RBP38.37■■■■□ 3.73
TRADD-201ENST00000345057 KIAA0556O60303 1618 aa38.35■■■■□ 3.73
TRADD-201ENST00000345057 ZEB1P37275 1124 aaPredicted RBP38.31■■■■□ 3.72
TRADD-201ENST00000345057 DISP1Q96F81 1524 aa38.31■■■■□ 3.72
TRADD-201ENST00000345057 RRBP1Q9P2E9 1410 aaKnown RBP38.31■■■■□ 3.72
TRADD-201ENST00000345057 CCDC18Q5T9S5 1454 aa38.27■■■■□ 3.72
TRADD-201ENST00000345057 HECW1Q76N89 1606 aa38.27■■■■□ 3.72
TRADD-201ENST00000345057 CARMIL2Q6F5E8 1435 aa38.21■■■■□ 3.71
TRADD-201ENST00000345057 CCNB3Q8WWL7 1395 aa38.16■■■■□ 3.7
TRADD-201ENST00000345057 JPH4Q96JJ6 628 aa38.15■■■■□ 3.7
TRADD-201ENST00000345057 LRRIQ1Q96JM4 1722 aa38.15■■■■□ 3.7
TRADD-201ENST00000345057 CHD1O14646 1710 aa38.14■■■■□ 3.7
TRADD-201ENST00000345057 MTUS2Q5JR59 1369 aa38.12■■■■□ 3.69
TRADD-201ENST00000345057 HNRNPUL2Q1KMD3 747 aaKnown RBP38.09■■■■□ 3.69
TRADD-201ENST00000345057 EHBP1L1Q8N3D4 1523 aa38.09■■■■□ 3.69
TRADD-201ENST00000345057 EPRSP07814 1512 aaKnown RBP38.06■■■■□ 3.68
TRADD-201ENST00000345057 PHLDB1Q86UU1 1377 aa38.03■■■■□ 3.68
TRADD-201ENST00000345057 RAPGEF6Q8TEU7 1601 aa38.03■■■■□ 3.68
TRADD-201ENST00000345057 CCER1Q8TC90 406 aaPredicted RBP38.01■■■■□ 3.67
TRADD-201ENST00000345057 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.98■■■■□ 3.67
TRADD-201ENST00000345057 SUPT6HQ7KZ85 1726 aaKnown RBP37.98■■■■□ 3.67
TRADD-201ENST00000345057 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.91■■■■□ 3.66
TRADD-201ENST00000345057 NUP153P49790 1475 aaKnown RBP37.9■■■■□ 3.66
TRADD-201ENST00000345057 NCOA2Q15596 1464 aa37.88■■■■□ 3.66
TRADD-201ENST00000345057 SHROOM2Q13796 1616 aa37.88■■■■□ 3.65
TRADD-201ENST00000345057 PRG4Q92954 1404 aaPredicted RBP37.87■■■■□ 3.65
TRADD-201ENST00000345057 CDK13Q14004 1512 aaKnown RBP37.87■■■■□ 3.65
TRADD-201ENST00000345057 MAGI3Q5TCQ9 1506 aa37.84■■■■□ 3.65
TRADD-201ENST00000345057 ARHGEF11O15085 1522 aa37.83■■■■□ 3.65
TRADD-201ENST00000345057 CDK11AQ9UQ88 783 aaPredicted RBP37.82■■■■□ 3.65
TRADD-201ENST00000345057 FGD6Q6ZV73 1430 aa37.81■■■■□ 3.64
TRADD-201ENST00000345057 MYOM3Q5VTT5 1437 aa37.8■■■■□ 3.64
TRADD-201ENST00000345057 PLB1Q6P1J6 1458 aa37.79■■■■□ 3.64
TRADD-201ENST00000345057 ABCA8O94911 1581 aa37.76■■■■□ 3.64
TRADD-201ENST00000345057 FAM50AQ14320 339 aaKnown RBP37.75■■■■□ 3.63
TRADD-201ENST00000345057 CLASP1Q7Z460 1538 aa37.74■■■■□ 3.63
TRADD-201ENST00000345057 OSCARQ8IYS5 282 aa37.73■■■■□ 3.63
TRADD-201ENST00000345057 PTPRGP23470 1445 aa37.72■■■■□ 3.63
TRADD-201ENST00000345057 DNAJC5Q9H3Z4 198 aa37.67■■■■□ 3.62
TRADD-201ENST00000345057 ARID3CA6NKF2 412 aa37.64■■■■□ 3.62
TRADD-201ENST00000345057 ITGAEP38570 1179 aa37.64■■■■□ 3.62
TRADD-201ENST00000345057 MIA2Q96PC5 1412 aa37.62■■■■□ 3.61
TRADD-201ENST00000345057 TROQ12816 1431 aaPredicted RBP37.61■■■■□ 3.61
TRADD-201ENST00000345057 PTPN23Q9H3S7 1636 aa37.58■■■■□ 3.61
TRADD-201ENST00000345057 TCOF1Q13428 1488 aaKnown RBP37.55■■■■□ 3.6
TRADD-201ENST00000345057 ADCY10Q96PN6 1610 aa37.53■■■■□ 3.6
TRADD-201ENST00000345057 CLSPNQ9HAW4 1339 aa37.52■■■■□ 3.6
TRADD-201ENST00000345057 UACAQ9BZF9 1416 aa37.52■■■■□ 3.6
TRADD-201ENST00000345057 SETD5Q9C0A6 1442 aa37.51■■■■□ 3.6
TRADD-201ENST00000345057 ATP10BO94823 1461 aa37.51■■■■□ 3.59
TRADD-201ENST00000345057 PLEKHD1A6NEE1 506 aa37.45■■■■□ 3.59
TRADD-201ENST00000345057 ERCC6L2Q5T890 1561 aa37.44■■■■□ 3.58
TRADD-201ENST00000345057 RAB3GAP2Q9H2M9 1393 aa37.44■■■■□ 3.58
TRADD-201ENST00000345057 DHX57Q6P158 1386 aaKnown RBP37.42■■■■□ 3.58
TRADD-201ENST00000345057 ITSN2Q9NZM3 1697 aa37.41■■■■□ 3.58
TRADD-201ENST00000345057 ABCC2Q92887 1545 aa37.4■■■■□ 3.58
TRADD-201ENST00000345057 KIF14Q15058 1648 aa37.39■■■■□ 3.58
TRADD-201ENST00000345057 UHRF1BP1LA0JNW5 1464 aa37.31■■■■□ 3.56
TRADD-201ENST00000345057 HFM1A2PYH4 1435 aa37.31■■■■□ 3.56
TRADD-201ENST00000345057 PTPRKQ15262 1439 aa37.28■■■■□ 3.56
TRADD-201ENST00000345057 GPATCH8Q9UKJ3 1502 aaKnown RBP37.27■■■■□ 3.56
TRADD-201ENST00000345057 AKNAQ7Z591 1439 aa37.25■■■■□ 3.55
TRADD-201ENST00000345057 ABCC10Q5T3U5 1492 aa37.23■■■■□ 3.55
TRADD-201ENST00000345057 CFDP1Q9UEE9 299 aaPredicted RBP37.22■■■■□ 3.55
TRADD-201ENST00000345057 DNMT1P26358 1616 aaKnown RBP37.19■■■■□ 3.54
TRADD-201ENST00000345057 NAIPQ13075 1403 aa37.16■■■■□ 3.54
TRADD-201ENST00000345057 DAPK1P53355 1430 aa37.15■■■■□ 3.54
TRADD-201ENST00000345057 CAMSAP2Q08AD1 1489 aa37.14■■■■□ 3.54
TRADD-201ENST00000345057 CDC42BPAQ5VT25 1732 aa37.14■■■■□ 3.54
TRADD-201ENST00000345057 KDM5BQ9UGL1 1544 aa37.14■■■■□ 3.54
TRADD-201ENST00000345057 GCC2Q8IWJ2 1684 aa37.12■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms