RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 PBRM1Q86U86 1689 aa22.58■■□□□ 1.21
PBX3-201ENST00000342287 FHAD1B1AJZ9 1412 aa22.56■■□□□ 1.2
PBX3-201ENST00000342287 ARAP1Q96P48 1450 aa22.53■■□□□ 1.2
PBX3-201ENST00000342287 ARHGAP35Q9NRY4 1499 aa22.53■■□□□ 1.2
PBX3-201ENST00000342287 EIF4G3O43432 1585 aaKnown RBP22.5■■□□□ 1.19
PBX3-201ENST00000342287 ADAMTS12P58397 1594 aa22.49■■□□□ 1.19
PBX3-201ENST00000342287 CTTNBP2Q8WZ74 1663 aa22.47■■□□□ 1.19
PBX3-201ENST00000342287 APLP2Q06481 763 aa22.45■■□□□ 1.19
PBX3-201ENST00000342287 SNAPC4Q5SXM2 1469 aa22.43■■□□□ 1.18
PBX3-201ENST00000342287 MAGI1Q96QZ7 1491 aaPredicted RBP22.4■■□□□ 1.18
PBX3-201ENST00000342287 EFCAB5A4FU69 1503 aa22.39■■□□□ 1.17
PBX3-201ENST00000342287 P3H3Q8IVL6 736 aa22.35■■□□□ 1.17
PBX3-201ENST00000342287 CHMP7Q8WUX9 453 aaPredicted RBP22.33■■□□□ 1.16
PBX3-201ENST00000342287 SYNJ2O15056 1496 aa22.32■■□□□ 1.16
PBX3-201ENST00000342287 GRIN2AQ12879 1464 aa22.32■■□□□ 1.16
PBX3-201ENST00000342287 FHOD3Q2V2M9 1422 aa22.29■■□□□ 1.16
PBX3-201ENST00000342287 IQGAP2Q13576 1575 aa22.28■■□□□ 1.16
PBX3-201ENST00000342287 SAMD9Q5K651 1589 aa22.27■■□□□ 1.16
PBX3-201ENST00000342287 KIAA0586Q9BVV6 1533 aa22.26■■□□□ 1.15
PBX3-201ENST00000342287 BCL11AQ9H165 835 aa22.26■■□□□ 1.15
PBX3-201ENST00000342287 FBLN2P98095 1184 aa22.25■■□□□ 1.15
PBX3-201ENST00000342287 PRKCSHP14314 528 aaPredicted RBP22.23■■□□□ 1.15
PBX3-201ENST00000342287 FMN1Q68DA7 1419 aa22.23■■□□□ 1.15
PBX3-201ENST00000342287 ACIN1Q9UKV3 1341 aaKnown RBP22.22■■□□□ 1.15
PBX3-201ENST00000342287 KANK4Q5T7N3 995 aaPredicted RBP22.19■■□□□ 1.14
PBX3-201ENST00000342287 MAP3K1Q13233 1512 aa22.19■■□□□ 1.14
PBX3-201ENST00000342287 UGGT2Q9NYU1 1516 aa22.18■■□□□ 1.14
PBX3-201ENST00000342287 CASKIN1Q8WXD9 1431 aa22.18■■□□□ 1.14
PBX3-201ENST00000342287 GTF3C3Q9Y5Q9 886 aa22.17■■□□□ 1.14
PBX3-201ENST00000342287 FYCO1Q9BQS8 1478 aa22.16■■□□□ 1.14
PBX3-201ENST00000342287 NUP160Q12769 1436 aa22.16■■□□□ 1.14
PBX3-201ENST00000342287 PCF11O94913 1555 aaKnown RBP22.16■■□□□ 1.14
PBX3-201ENST00000342287 NEUROD1Q13562 356 aa22.16■■□□□ 1.14
PBX3-201ENST00000342287 CEP170Q5SW79 1584 aa22.15■■□□□ 1.14
PBX3-201ENST00000342287 ATP1B4Q9UN42 357 aaPredicted RBP22.15■■□□□ 1.14
PBX3-201ENST00000342287 TIAM1Q13009 1591 aa22.13■■□□□ 1.13
PBX3-201ENST00000342287 DISP1Q96F81 1524 aa22.07■■□□□ 1.12
PBX3-201ENST00000342287 LRRC9Q6ZRR7 1453 aa22.05■■□□□ 1.12
PBX3-201ENST00000342287 JPH4Q96JJ6 628 aa22.05■■□□□ 1.12
PBX3-201ENST00000342287 KIAA0556O60303 1618 aa22.04■■□□□ 1.12
PBX3-201ENST00000342287 CFAP43Q8NDM7 1665 aa22.04■■□□□ 1.12
PBX3-201ENST00000342287 CARMIL2Q6F5E8 1435 aa21.99■■□□□ 1.11
PBX3-201ENST00000342287 CHD1O14646 1710 aa21.98■■□□□ 1.11
PBX3-201ENST00000342287 CENPBP07199 599 aaPredicted RBP21.96■■□□□ 1.11
PBX3-201ENST00000342287 ZEB1P37275 1124 aaPredicted RBP21.94■■□□□ 1.1
PBX3-201ENST00000342287 HECW1Q76N89 1606 aa21.94■■□□□ 1.1
PBX3-201ENST00000342287 RRBP1Q9P2E9 1410 aaKnown RBP21.94■■□□□ 1.1
PBX3-201ENST00000342287 CCDC18Q5T9S5 1454 aa21.94■■□□□ 1.1
PBX3-201ENST00000342287 MTUS2Q5JR59 1369 aa21.91■■□□□ 1.1
PBX3-201ENST00000342287 LRRIQ1Q96JM4 1722 aa21.9■■□□□ 1.1
PBX3-201ENST00000342287 HNRNPUL2Q1KMD3 747 aaKnown RBP21.89■■□□□ 1.1
PBX3-201ENST00000342287 CCNB3Q8WWL7 1395 aa21.88■■□□□ 1.09
PBX3-201ENST00000342287 EPRSP07814 1512 aaKnown RBP21.88■■□□□ 1.09
PBX3-201ENST00000342287 PRG4Q92954 1404 aaPredicted RBP21.87■■□□□ 1.09
PBX3-201ENST00000342287 PHLDB1Q86UU1 1377 aa21.86■■□□□ 1.09
PBX3-201ENST00000342287 RAPGEF6Q8TEU7 1601 aa21.84■■□□□ 1.09
PBX3-201ENST00000342287 EHBP1L1Q8N3D4 1523 aa21.82■■□□□ 1.08
PBX3-201ENST00000342287 NUP153P49790 1475 aaKnown RBP21.81■■□□□ 1.08
PBX3-201ENST00000342287 SHROOM2Q13796 1616 aa21.8■■□□□ 1.08
PBX3-201ENST00000342287 CDK13Q14004 1512 aaKnown RBP21.8■■□□□ 1.08
PBX3-201ENST00000342287 PLB1Q6P1J6 1458 aa21.79■■□□□ 1.08
PBX3-201ENST00000342287 ARID3CA6NKF2 412 aa21.79■■□□□ 1.08
PBX3-201ENST00000342287 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.79■■□□□ 1.08
PBX3-201ENST00000342287 MAGI3Q5TCQ9 1506 aa21.77■■□□□ 1.08
PBX3-201ENST00000342287 PTPRGP23470 1445 aa21.76■■□□□ 1.07
PBX3-201ENST00000342287 NCOA2Q15596 1464 aa21.76■■□□□ 1.07
PBX3-201ENST00000342287 CLASP1Q7Z460 1538 aa21.76■■□□□ 1.07
PBX3-201ENST00000342287 CDK11AQ9UQ88 783 aaPredicted RBP21.76■■□□□ 1.07
PBX3-201ENST00000342287 SUPT6HQ7KZ85 1726 aaKnown RBP21.75■■□□□ 1.07
PBX3-201ENST00000342287 CCER1Q8TC90 406 aaPredicted RBP21.75■■□□□ 1.07
PBX3-201ENST00000342287 ABCA8O94911 1581 aa21.73■■□□□ 1.07
PBX3-201ENST00000342287 FAM50AQ14320 339 aaKnown RBP21.72■■□□□ 1.07
PBX3-201ENST00000342287 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.71■■□□□ 1.07
PBX3-201ENST00000342287 ARHGEF11O15085 1522 aa21.7■■□□□ 1.06
PBX3-201ENST00000342287 FGD6Q6ZV73 1430 aa21.7■■□□□ 1.06
PBX3-201ENST00000342287 MYOM3Q5VTT5 1437 aa21.69■■□□□ 1.06
PBX3-201ENST00000342287 ITGAEP38570 1179 aa21.68■■□□□ 1.06
PBX3-201ENST00000342287 ERCC6L2Q5T890 1561 aa21.64■■□□□ 1.06
PBX3-201ENST00000342287 UACAQ9BZF9 1416 aa21.63■■□□□ 1.05
PBX3-201ENST00000342287 ATP10BO94823 1461 aa21.63■■□□□ 1.05
PBX3-201ENST00000342287 TROQ12816 1431 aaPredicted RBP21.62■■□□□ 1.05
PBX3-201ENST00000342287 ERICH6Q7L0X2 663 aa21.62■■□□□ 1.05
PBX3-201ENST00000342287 OSCARQ8IYS5 282 aa21.61■■□□□ 1.05
PBX3-201ENST00000342287 PLEKHD1A6NEE1 506 aa21.6■■□□□ 1.05
PBX3-201ENST00000342287 MIA2Q96PC5 1412 aa21.57■■□□□ 1.04
PBX3-201ENST00000342287 PTPN23Q9H3S7 1636 aa21.55■■□□□ 1.04
PBX3-201ENST00000342287 TCOF1Q13428 1488 aaKnown RBP21.53■■□□□ 1.04
PBX3-201ENST00000342287 ABCC2Q92887 1545 aa21.53■■□□□ 1.04
PBX3-201ENST00000342287 ADCY10Q96PN6 1610 aa21.51■■□□□ 1.03
PBX3-201ENST00000342287 SETD5Q9C0A6 1442 aa21.5■■□□□ 1.03
PBX3-201ENST00000342287 ANP32EQ9BTT0 268 aa21.5■■□□□ 1.03
PBX3-201ENST00000342287 UHRF1BP1LA0JNW5 1464 aa21.48■■□□□ 1.03
PBX3-201ENST00000342287 RAB3GAP2Q9H2M9 1393 aa21.47■■□□□ 1.03
PBX3-201ENST00000342287 KIF14Q15058 1648 aa21.46■■□□□ 1.03
PBX3-201ENST00000342287 PTPRKQ15262 1439 aa21.45■■□□□ 1.02
PBX3-201ENST00000342287 GPATCH8Q9UKJ3 1502 aaKnown RBP21.45■■□□□ 1.02
PBX3-201ENST00000342287 CFDP1Q9UEE9 299 aaPredicted RBP21.44■■□□□ 1.02
PBX3-201ENST00000342287 DHX57Q6P158 1386 aaKnown RBP21.43■■□□□ 1.02
PBX3-201ENST00000342287 ABCC10Q5T3U5 1492 aa21.41■■□□□ 1.02
PBX3-201ENST00000342287 CLSPNQ9HAW4 1339 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 588.7 ms