RNA–Protein interactions for RNA: ENST00000340650.5

NHLRC1-201, Transcript of NHL repeat containing E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 BASIC

Gene NHLRC1, Length 2,248 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1-201ENST00000340650 VPS8Q8N3P4 1428 aa29.69■■■□□ 2.34
NHLRC1-201ENST00000340650 ZNF608Q9ULD9 1512 aaPredicted RBP29.67■■■□□ 2.34
NHLRC1-201ENST00000340650 ARAP1Q96P48 1450 aa29.65■■■□□ 2.34
NHLRC1-201ENST00000340650 NEUROD1Q13562 356 aa29.61■■■□□ 2.33
NHLRC1-201ENST00000340650 ARHGAP35Q9NRY4 1499 aa29.61■■■□□ 2.33
NHLRC1-201ENST00000340650 PBRM1Q86U86 1689 aa29.6■■■□□ 2.33
NHLRC1-201ENST00000340650 DIEXFQ68CQ4 756 aaKnown RBP29.57■■■□□ 2.32
NHLRC1-201ENST00000340650 GRIN2BQ13224 1484 aa29.54■■■□□ 2.32
NHLRC1-201ENST00000340650 CENPBP07199 599 aaPredicted RBP29.49■■■□□ 2.31
NHLRC1-201ENST00000340650 EIF4G3O43432 1585 aaKnown RBP29.48■■■□□ 2.31
NHLRC1-201ENST00000340650 FHAD1B1AJZ9 1412 aa29.48■■■□□ 2.31
NHLRC1-201ENST00000340650 APLP2Q06481 763 aa29.47■■■□□ 2.31
NHLRC1-201ENST00000340650 CTTNBP2Q8WZ74 1663 aa29.46■■■□□ 2.31
NHLRC1-201ENST00000340650 ADAMTS12P58397 1594 aa29.46■■■□□ 2.31
NHLRC1-201ENST00000340650 P3H3Q8IVL6 736 aa29.45■■■□□ 2.31
NHLRC1-201ENST00000340650 SNAPC4Q5SXM2 1469 aa29.4■■■□□ 2.3
NHLRC1-201ENST00000340650 GTF3C3Q9Y5Q9 886 aa29.36■■■□□ 2.29
NHLRC1-201ENST00000340650 FHOD3Q2V2M9 1422 aa29.34■■■□□ 2.29
NHLRC1-201ENST00000340650 EFCAB5A4FU69 1503 aa29.3■■■□□ 2.28
NHLRC1-201ENST00000340650 ZNF316A6NFI3 1004 aaPredicted RBP29.26■■■□□ 2.27
NHLRC1-201ENST00000340650 KANK4Q5T7N3 995 aaPredicted RBP29.24■■■□□ 2.27
NHLRC1-201ENST00000340650 MAGI1Q96QZ7 1491 aaPredicted RBP29.23■■■□□ 2.27
NHLRC1-201ENST00000340650 GRIN2AQ12879 1464 aa29.21■■■□□ 2.27
NHLRC1-201ENST00000340650 FBLN2P98095 1184 aa29.21■■■□□ 2.27
NHLRC1-201ENST00000340650 CHMP7Q8WUX9 453 aaPredicted RBP29.2■■■□□ 2.27
NHLRC1-201ENST00000340650 IQGAP2Q13576 1575 aa29.19■■■□□ 2.26
NHLRC1-201ENST00000340650 SAMD9Q5K651 1589 aa29.18■■■□□ 2.26
NHLRC1-201ENST00000340650 ATP1B4Q9UN42 357 aaPredicted RBP29.18■■■□□ 2.26
NHLRC1-201ENST00000340650 SYNJ2O15056 1496 aa29.17■■■□□ 2.26
NHLRC1-201ENST00000340650 PCF11O94913 1555 aaKnown RBP29.16■■■□□ 2.26
NHLRC1-201ENST00000340650 FMN1Q68DA7 1419 aa29.09■■■□□ 2.25
NHLRC1-201ENST00000340650 KIAA0586Q9BVV6 1533 aa29.08■■■□□ 2.25
NHLRC1-201ENST00000340650 TIAM1Q13009 1591 aa29.07■■■□□ 2.24
NHLRC1-201ENST00000340650 CASKIN1Q8WXD9 1431 aa29.06■■■□□ 2.24
NHLRC1-201ENST00000340650 FYCO1Q9BQS8 1478 aa29.05■■■□□ 2.24
NHLRC1-201ENST00000340650 CEP170Q5SW79 1584 aa29.04■■■□□ 2.24
NHLRC1-201ENST00000340650 MYT1Q01538 1121 aa29.01■■■□□ 2.24
NHLRC1-201ENST00000340650 MAP3K1Q13233 1512 aa29■■■□□ 2.23
NHLRC1-201ENST00000340650 UGGT2Q9NYU1 1516 aa29■■■□□ 2.23
NHLRC1-201ENST00000340650 LRRC9Q6ZRR7 1453 aa28.96■■■□□ 2.23
NHLRC1-201ENST00000340650 NUP160Q12769 1436 aa28.95■■■□□ 2.22
NHLRC1-201ENST00000340650 CFAP43Q8NDM7 1665 aa28.95■■■□□ 2.22
NHLRC1-201ENST00000340650 HNRNPUL2Q1KMD3 747 aaKnown RBP28.93■■■□□ 2.22
NHLRC1-201ENST00000340650 DISP1Q96F81 1524 aa28.92■■■□□ 2.22
NHLRC1-201ENST00000340650 KIAA0556O60303 1618 aa28.89■■■□□ 2.21
NHLRC1-201ENST00000340650 MIER1Q8N108 512 aa28.86■■■□□ 2.21
NHLRC1-201ENST00000340650 JPH4Q96JJ6 628 aa28.84■■■□□ 2.21
NHLRC1-201ENST00000340650 LRRIQ1Q96JM4 1722 aa28.84■■■□□ 2.21
NHLRC1-201ENST00000340650 CHD1O14646 1710 aa28.81■■■□□ 2.2
NHLRC1-201ENST00000340650 RRBP1Q9P2E9 1410 aaKnown RBP28.8■■■□□ 2.2
NHLRC1-201ENST00000340650 YTHDC1Q96MU7 727 aaKnown RBP28.8■■■□□ 2.2
NHLRC1-201ENST00000340650 ARID3CA6NKF2 412 aa28.79■■■□□ 2.2
NHLRC1-201ENST00000340650 PHLDB1Q86UU1 1377 aa28.78■■■□□ 2.2
NHLRC1-201ENST00000340650 CCNB3Q8WWL7 1395 aa28.76■■■□□ 2.19
NHLRC1-201ENST00000340650 MTUS2Q5JR59 1369 aa28.76■■■□□ 2.19
NHLRC1-201ENST00000340650 HECW1Q76N89 1606 aa28.75■■■□□ 2.19
NHLRC1-201ENST00000340650 CARMIL2Q6F5E8 1435 aa28.72■■■□□ 2.19
NHLRC1-201ENST00000340650 EPRSP07814 1512 aaKnown RBP28.7■■■□□ 2.18
NHLRC1-201ENST00000340650 CCDC18Q5T9S5 1454 aa28.69■■■□□ 2.18
NHLRC1-201ENST00000340650 CDK13Q14004 1512 aaKnown RBP28.69■■■□□ 2.18
NHLRC1-201ENST00000340650 ITGAEP38570 1179 aa28.66■■■□□ 2.18
NHLRC1-201ENST00000340650 CLSPNQ9HAW4 1339 aa28.65■■■□□ 2.18
NHLRC1-201ENST00000340650 MAGI3Q5TCQ9 1506 aa28.65■■■□□ 2.18
NHLRC1-201ENST00000340650 PRG4Q92954 1404 aaPredicted RBP28.63■■■□□ 2.17
NHLRC1-201ENST00000340650 PLB1Q6P1J6 1458 aa28.63■■■□□ 2.17
NHLRC1-201ENST00000340650 RAPGEF6Q8TEU7 1601 aa28.62■■■□□ 2.17
NHLRC1-201ENST00000340650 NUP153P49790 1475 aaKnown RBP28.62■■■□□ 2.17
NHLRC1-201ENST00000340650 EHBP1L1Q8N3D4 1523 aa28.61■■■□□ 2.17
NHLRC1-201ENST00000340650 FAM50AQ14320 339 aaKnown RBP28.61■■■□□ 2.17
NHLRC1-201ENST00000340650 NCOA2Q15596 1464 aa28.58■■■□□ 2.17
NHLRC1-201ENST00000340650 SUPT6HQ7KZ85 1726 aaKnown RBP28.54■■■□□ 2.16
NHLRC1-201ENST00000340650 DHX57Q6P158 1386 aaKnown RBP28.51■■■□□ 2.15
NHLRC1-201ENST00000340650 FGD6Q6ZV73 1430 aa28.5■■■□□ 2.15
NHLRC1-201ENST00000340650 SHROOM2Q13796 1616 aa28.48■■■□□ 2.15
NHLRC1-201ENST00000340650 PTPRGP23470 1445 aa28.47■■■□□ 2.15
NHLRC1-201ENST00000340650 MYOM3Q5VTT5 1437 aa28.46■■■□□ 2.15
NHLRC1-201ENST00000340650 ARHGEF11O15085 1522 aa28.45■■■□□ 2.14
NHLRC1-201ENST00000340650 ERCC6L2Q5T890 1561 aa28.44■■■□□ 2.14
NHLRC1-201ENST00000340650 ABCA8O94911 1581 aa28.43■■■□□ 2.14
NHLRC1-201ENST00000340650 CLASP1Q7Z460 1538 aa28.43■■■□□ 2.14
NHLRC1-201ENST00000340650 CDK11AQ9UQ88 783 aaPredicted RBP28.42■■■□□ 2.14
NHLRC1-201ENST00000340650 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.37■■■□□ 2.13
NHLRC1-201ENST00000340650 ATP10BO94823 1461 aa28.32■■■□□ 2.12
NHLRC1-201ENST00000340650 TROQ12816 1431 aaPredicted RBP28.32■■■□□ 2.12
NHLRC1-201ENST00000340650 PTPN23Q9H3S7 1636 aa28.31■■■□□ 2.12
NHLRC1-201ENST00000340650 RAB3GAP2Q9H2M9 1393 aa28.28■■■□□ 2.12
NHLRC1-201ENST00000340650 UACAQ9BZF9 1416 aa28.28■■■□□ 2.12
NHLRC1-201ENST00000340650 PLEKHD1A6NEE1 506 aa28.25■■■□□ 2.11
NHLRC1-201ENST00000340650 PTPRKQ15262 1439 aa28.25■■■□□ 2.11
NHLRC1-201ENST00000340650 SETD5Q9C0A6 1442 aa28.25■■■□□ 2.11
NHLRC1-201ENST00000340650 KIF14Q15058 1648 aa28.24■■■□□ 2.11
NHLRC1-201ENST00000340650 MIA2Q96PC5 1412 aa28.22■■■□□ 2.11
NHLRC1-201ENST00000340650 TCOF1Q13428 1488 aaKnown RBP28.21■■■□□ 2.11
NHLRC1-201ENST00000340650 SUPT16HQ9Y5B9 1047 aaKnown RBP28.2■■■□□ 2.1
NHLRC1-201ENST00000340650 ADCY10Q96PN6 1610 aa28.16■■■□□ 2.1
NHLRC1-201ENST00000340650 OSCARQ8IYS5 282 aa28.16■■■□□ 2.1
NHLRC1-201ENST00000340650 ABCC2Q92887 1545 aa28.16■■■□□ 2.1
NHLRC1-201ENST00000340650 ZNF644Q9H582 1327 aaPredicted RBP28.16■■■□□ 2.1
NHLRC1-201ENST00000340650 CHIC2Q9UKJ5 165 aa28.13■■■□□ 2.09
NHLRC1-201ENST00000340650 GPATCH8Q9UKJ3 1502 aaKnown RBP28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms