RNA–Protein interactions for RNA: ENST00000329245.8

TOP1MT-201, Transcript of DNA topoisomerase I mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1MT, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-201ENST00000329245 ARAP1Q96P48 1450 aa33.96■■■■□ 3.03
TOP1MT-201ENST00000329245 CHMP7Q8WUX9 453 aaPredicted RBP33.95■■■■□ 3.03
TOP1MT-201ENST00000329245 PPARGC1BQ86YN6 1023 aaKnown RBP33.92■■■■□ 3.02
TOP1MT-201ENST00000329245 FBLN2P98095 1184 aa33.91■■■■□ 3.02
TOP1MT-201ENST00000329245 SYNJ2O15056 1496 aa33.91■■■■□ 3.02
TOP1MT-201ENST00000329245 GRIN2AQ12879 1464 aa33.89■■■■□ 3.02
TOP1MT-201ENST00000329245 P3H3Q8IVL6 736 aa33.85■■■■□ 3.01
TOP1MT-201ENST00000329245 PCGF6Q9BYE7 350 aa33.8■■■■□ 3
TOP1MT-201ENST00000329245 APLP2Q06481 763 aa33.8■■■■□ 3
TOP1MT-201ENST00000329245 EFCAB5A4FU69 1503 aa33.79■■■■□ 3
TOP1MT-201ENST00000329245 TRIM26Q12899 539 aaPredicted RBP33.78■■■■□ 3
TOP1MT-201ENST00000329245 IQGAP2Q13576 1575 aa33.76■■■□□ 2.99
TOP1MT-201ENST00000329245 KIAA0586Q9BVV6 1533 aa33.72■■■□□ 2.99
TOP1MT-201ENST00000329245 FHOD3Q2V2M9 1422 aa33.72■■■□□ 2.99
TOP1MT-201ENST00000329245 TTBK1Q5TCY1 1321 aaPredicted RBP33.69■■■□□ 2.98
TOP1MT-201ENST00000329245 SAMD9Q5K651 1589 aa33.66■■■□□ 2.98
TOP1MT-201ENST00000329245 CEP170Q5SW79 1584 aa33.65■■■□□ 2.98
TOP1MT-201ENST00000329245 NUP160Q12769 1436 aa33.62■■■□□ 2.97
TOP1MT-201ENST00000329245 UGGT2Q9NYU1 1516 aa33.57■■■□□ 2.96
TOP1MT-201ENST00000329245 FMN1Q68DA7 1419 aa33.56■■■□□ 2.96
TOP1MT-201ENST00000329245 ATP1B4Q9UN42 357 aaPredicted RBP33.53■■■□□ 2.96
TOP1MT-201ENST00000329245 CHD1O14646 1710 aa33.51■■■□□ 2.95
TOP1MT-201ENST00000329245 JPH4Q96JJ6 628 aa33.48■■■□□ 2.95
TOP1MT-201ENST00000329245 PCF11O94913 1555 aaKnown RBP33.46■■■□□ 2.95
TOP1MT-201ENST00000329245 CASKIN1Q8WXD9 1431 aa33.45■■■□□ 2.95
TOP1MT-201ENST00000329245 DISP1Q96F81 1524 aa33.43■■■□□ 2.94
TOP1MT-201ENST00000329245 FYCO1Q9BQS8 1478 aa33.43■■■□□ 2.94
TOP1MT-201ENST00000329245 KANK4Q5T7N3 995 aaPredicted RBP33.42■■■□□ 2.94
TOP1MT-201ENST00000329245 KIAA0556O60303 1618 aa33.4■■■□□ 2.94
TOP1MT-201ENST00000329245 MAP3K1Q13233 1512 aa33.36■■■□□ 2.93
TOP1MT-201ENST00000329245 CARMIL2Q6F5E8 1435 aa33.35■■■□□ 2.93
TOP1MT-201ENST00000329245 TIAM1Q13009 1591 aa33.34■■■□□ 2.93
TOP1MT-201ENST00000329245 PRG4Q92954 1404 aaPredicted RBP33.23■■■□□ 2.91
TOP1MT-201ENST00000329245 LRRC9Q6ZRR7 1453 aa33.22■■■□□ 2.91
TOP1MT-201ENST00000329245 CFAP43Q8NDM7 1665 aa33.21■■■□□ 2.91
TOP1MT-201ENST00000329245 HECW1Q76N89 1606 aa33.16■■■□□ 2.9
TOP1MT-201ENST00000329245 SHROOM2Q13796 1616 aa33.12■■■□□ 2.89
TOP1MT-201ENST00000329245 CLASP1Q7Z460 1538 aa33.12■■■□□ 2.89
TOP1MT-201ENST00000329245 CCDC18Q5T9S5 1454 aa33.11■■■□□ 2.89
TOP1MT-201ENST00000329245 LRRIQ1Q96JM4 1722 aa33.11■■■□□ 2.89
TOP1MT-201ENST00000329245 ARID3CA6NKF2 412 aa33.09■■■□□ 2.89
TOP1MT-201ENST00000329245 EPRSP07814 1512 aaKnown RBP33.08■■■□□ 2.89
TOP1MT-201ENST00000329245 MTUS2Q5JR59 1369 aa33.07■■■□□ 2.89
TOP1MT-201ENST00000329245 RAPGEF6Q8TEU7 1601 aa33.07■■■□□ 2.88
TOP1MT-201ENST00000329245 PLB1Q6P1J6 1458 aa33.05■■■□□ 2.88
TOP1MT-201ENST00000329245 PTPRGP23470 1445 aa33.04■■■□□ 2.88
TOP1MT-201ENST00000329245 OSCARQ8IYS5 282 aa33.01■■■□□ 2.87
TOP1MT-201ENST00000329245 NUP153P49790 1475 aaKnown RBP33.01■■■□□ 2.87
TOP1MT-201ENST00000329245 CDK13Q14004 1512 aaKnown RBP32.99■■■□□ 2.87
TOP1MT-201ENST00000329245 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.99■■■□□ 2.87
TOP1MT-201ENST00000329245 HNRNPUL2Q1KMD3 747 aaKnown RBP32.99■■■□□ 2.87
TOP1MT-201ENST00000329245 ERCC6L2Q5T890 1561 aa32.96■■■□□ 2.87
TOP1MT-201ENST00000329245 PHLDB1Q86UU1 1377 aa32.94■■■□□ 2.86
TOP1MT-201ENST00000329245 RRBP1Q9P2E9 1410 aaKnown RBP32.93■■■□□ 2.86
TOP1MT-201ENST00000329245 HRCP23327 699 aa32.92■■■□□ 2.86
TOP1MT-201ENST00000329245 EHBP1L1Q8N3D4 1523 aa32.92■■■□□ 2.86
TOP1MT-201ENST00000329245 ABCA8O94911 1581 aa32.91■■■□□ 2.86
TOP1MT-201ENST00000329245 CDK11AQ9UQ88 783 aaPredicted RBP32.9■■■□□ 2.86
TOP1MT-201ENST00000329245 MAGI3Q5TCQ9 1506 aa32.9■■■□□ 2.86
TOP1MT-201ENST00000329245 CCNB3Q8WWL7 1395 aa32.89■■■□□ 2.86
TOP1MT-201ENST00000329245 NCOA2Q15596 1464 aa32.83■■■□□ 2.85
TOP1MT-201ENST00000329245 SUPT6HQ7KZ85 1726 aaKnown RBP32.83■■■□□ 2.85
TOP1MT-201ENST00000329245 UACAQ9BZF9 1416 aa32.82■■■□□ 2.84
TOP1MT-201ENST00000329245 ATP10BO94823 1461 aa32.76■■■□□ 2.84
TOP1MT-201ENST00000329245 FAM50AQ14320 339 aaKnown RBP32.74■■■□□ 2.83
TOP1MT-201ENST00000329245 PLEKHD1A6NEE1 506 aa32.72■■■□□ 2.83
TOP1MT-201ENST00000329245 ARHGEF11O15085 1522 aa32.71■■■□□ 2.83
TOP1MT-201ENST00000329245 TROQ12816 1431 aaPredicted RBP32.7■■■□□ 2.83
TOP1MT-201ENST00000329245 MYOM3Q5VTT5 1437 aa32.7■■■□□ 2.83
TOP1MT-201ENST00000329245 ITGAEP38570 1179 aa32.7■■■□□ 2.82
TOP1MT-201ENST00000329245 FGD6Q6ZV73 1430 aa32.69■■■□□ 2.82
TOP1MT-201ENST00000329245 ABCC2Q92887 1545 aa32.67■■■□□ 2.82
TOP1MT-201ENST00000329245 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.6■■■□□ 2.81
TOP1MT-201ENST00000329245 UHRF1BP1LA0JNW5 1464 aa32.58■■■□□ 2.81
TOP1MT-201ENST00000329245 MIA2Q96PC5 1412 aa32.52■■■□□ 2.8
TOP1MT-201ENST00000329245 CCER1Q8TC90 406 aaPredicted RBP32.51■■■□□ 2.8
TOP1MT-201ENST00000329245 ADCY10Q96PN6 1610 aa32.51■■■□□ 2.79
TOP1MT-201ENST00000329245 KIF14Q15058 1648 aa32.5■■■□□ 2.79
TOP1MT-201ENST00000329245 PTPN23Q9H3S7 1636 aa32.5■■■□□ 2.79
TOP1MT-201ENST00000329245 KDM5BQ9UGL1 1544 aa32.47■■■□□ 2.79
TOP1MT-201ENST00000329245 TCOF1Q13428 1488 aaKnown RBP32.43■■■□□ 2.78
TOP1MT-201ENST00000329245 ZCCHC11Q5TAX3 1644 aaKnown RBP32.43■■■□□ 2.78
TOP1MT-201ENST00000329245 CFDP1Q9UEE9 299 aaPredicted RBP32.42■■■□□ 2.78
TOP1MT-201ENST00000329245 GPATCH8Q9UKJ3 1502 aaKnown RBP32.41■■■□□ 2.78
TOP1MT-201ENST00000329245 ZEB1P37275 1124 aaPredicted RBP32.4■■■□□ 2.78
TOP1MT-201ENST00000329245 ABCC10Q5T3U5 1492 aa32.38■■■□□ 2.77
TOP1MT-201ENST00000329245 KCNH8Q96L42 1107 aa32.37■■■□□ 2.77
TOP1MT-201ENST00000329245 ITSN2Q9NZM3 1697 aa32.36■■■□□ 2.77
TOP1MT-201ENST00000329245 ZNF644Q9H582 1327 aaPredicted RBP32.33■■■□□ 2.77
TOP1MT-201ENST00000329245 ZNF777Q9ULD5 760 aaPredicted RBP32.33■■■□□ 2.77
TOP1MT-201ENST00000329245 PTPRKQ15262 1439 aa32.31■■■□□ 2.76
TOP1MT-201ENST00000329245 NPM1P06748 294 aaKnown RBP eCLIP32.3■■■□□ 2.76
TOP1MT-201ENST00000329245 SETD5Q9C0A6 1442 aa32.29■■■□□ 2.76
TOP1MT-201ENST00000329245 CDC42BPAQ5VT25 1732 aa32.26■■■□□ 2.75
TOP1MT-201ENST00000329245 RAB3GAP2Q9H2M9 1393 aa32.25■■■□□ 2.75
TOP1MT-201ENST00000329245 CAMSAP2Q08AD1 1489 aa32.24■■■□□ 2.75
TOP1MT-201ENST00000329245 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.24■■■□□ 2.75
TOP1MT-201ENST00000329245 CHIC2Q9UKJ5 165 aa32.23■■■□□ 2.75
TOP1MT-201ENST00000329245 CYB5RLQ6IPT4 315 aa32.2■■■□□ 2.75
TOP1MT-201ENST00000329245 WDR7Q9Y4E6 1490 aa32.19■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms