RNA–Protein interactions for RNA: ENST00000328354.10

CHEK2-201, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHEK2, Length 1,867 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-201ENST00000328354 FHAD1B1AJZ9 1412 aa22.09■■□□□ 1.13
CHEK2-201ENST00000328354 EFCAB5A4FU69 1503 aa22.07■■□□□ 1.12
CHEK2-201ENST00000328354 EIF4G3O43432 1585 aaKnown RBP22.06■■□□□ 1.12
CHEK2-201ENST00000328354 HRCP23327 699 aa22.03■■□□□ 1.12
CHEK2-201ENST00000328354 APLP2Q06481 763 aa22.01■■□□□ 1.11
CHEK2-201ENST00000328354 SAMD9Q5K651 1589 aa21.96■■□□□ 1.11
CHEK2-201ENST00000328354 MAP3K1Q13233 1512 aa21.94■■□□□ 1.1
CHEK2-201ENST00000328354 SNAPC4Q5SXM2 1469 aa21.94■■□□□ 1.1
CHEK2-201ENST00000328354 TTBK1Q5TCY1 1321 aaPredicted RBP21.93■■□□□ 1.1
CHEK2-201ENST00000328354 MAGI1Q96QZ7 1491 aaPredicted RBP21.92■■□□□ 1.1
CHEK2-201ENST00000328354 FHOD3Q2V2M9 1422 aa21.9■■□□□ 1.1
CHEK2-201ENST00000328354 IQGAP2Q13576 1575 aa21.89■■□□□ 1.09
CHEK2-201ENST00000328354 PCF11O94913 1555 aaKnown RBP21.88■■□□□ 1.09
CHEK2-201ENST00000328354 TIAM1Q13009 1591 aa21.86■■□□□ 1.09
CHEK2-201ENST00000328354 GRIN2AQ12879 1464 aa21.86■■□□□ 1.09
CHEK2-201ENST00000328354 FYCO1Q9BQS8 1478 aa21.85■■□□□ 1.09
CHEK2-201ENST00000328354 FMN1Q68DA7 1419 aa21.84■■□□□ 1.09
CHEK2-201ENST00000328354 CFAP43Q8NDM7 1665 aa21.84■■□□□ 1.09
CHEK2-201ENST00000328354 SYNJ2O15056 1496 aa21.83■■□□□ 1.09
CHEK2-201ENST00000328354 CASKIN1Q8WXD9 1431 aa21.83■■□□□ 1.09
CHEK2-201ENST00000328354 KANK4Q5T7N3 995 aaPredicted RBP21.82■■□□□ 1.08
CHEK2-201ENST00000328354 P3H3Q8IVL6 736 aa21.82■■□□□ 1.08
CHEK2-201ENST00000328354 KIAA0586Q9BVV6 1533 aa21.81■■□□□ 1.08
CHEK2-201ENST00000328354 UGGT2Q9NYU1 1516 aa21.8■■□□□ 1.08
CHEK2-201ENST00000328354 DNAJC5Q9H3Z4 198 aa21.77■■□□□ 1.08
CHEK2-201ENST00000328354 LRRC9Q6ZRR7 1453 aa21.74■■□□□ 1.07
CHEK2-201ENST00000328354 CEP170Q5SW79 1584 aa21.73■■□□□ 1.07
CHEK2-201ENST00000328354 NUP160Q12769 1436 aa21.71■■□□□ 1.07
CHEK2-201ENST00000328354 RRBP1Q9P2E9 1410 aaKnown RBP21.7■■□□□ 1.06
CHEK2-201ENST00000328354 CHMP7Q8WUX9 453 aaPredicted RBP21.7■■□□□ 1.06
CHEK2-201ENST00000328354 LRRIQ1Q96JM4 1722 aa21.68■■□□□ 1.06
CHEK2-201ENST00000328354 KIAA0556O60303 1618 aa21.67■■□□□ 1.06
CHEK2-201ENST00000328354 ZEB1P37275 1124 aaPredicted RBP21.66■■□□□ 1.06
CHEK2-201ENST00000328354 DISP1Q96F81 1524 aa21.66■■□□□ 1.06
CHEK2-201ENST00000328354 HECW1Q76N89 1606 aa21.61■■□□□ 1.05
CHEK2-201ENST00000328354 ATP1B4Q9UN42 357 aaPredicted RBP21.59■■□□□ 1.05
CHEK2-201ENST00000328354 CCDC18Q5T9S5 1454 aa21.58■■□□□ 1.05
CHEK2-201ENST00000328354 CCNB3Q8WWL7 1395 aa21.58■■□□□ 1.04
CHEK2-201ENST00000328354 FBLN2P98095 1184 aa21.58■■□□□ 1.04
CHEK2-201ENST00000328354 CHD1O14646 1710 aa21.57■■□□□ 1.04
CHEK2-201ENST00000328354 OSCARQ8IYS5 282 aa21.57■■□□□ 1.04
CHEK2-201ENST00000328354 HNRNPUL2Q1KMD3 747 aaKnown RBP21.54■■□□□ 1.04
CHEK2-201ENST00000328354 PHLDB1Q86UU1 1377 aa21.54■■□□□ 1.04
CHEK2-201ENST00000328354 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.54■■□□□ 1.04
CHEK2-201ENST00000328354 EHBP1L1Q8N3D4 1523 aa21.52■■□□□ 1.04
CHEK2-201ENST00000328354 EPRSP07814 1512 aaKnown RBP21.51■■□□□ 1.03
CHEK2-201ENST00000328354 JPH4Q96JJ6 628 aa21.49■■□□□ 1.03
CHEK2-201ENST00000328354 CARMIL2Q6F5E8 1435 aa21.49■■□□□ 1.03
CHEK2-201ENST00000328354 MTUS2Q5JR59 1369 aa21.49■■□□□ 1.03
CHEK2-201ENST00000328354 CCER1Q8TC90 406 aaPredicted RBP21.49■■□□□ 1.03
CHEK2-201ENST00000328354 RAPGEF6Q8TEU7 1601 aa21.49■■□□□ 1.03
CHEK2-201ENST00000328354 SUPT6HQ7KZ85 1726 aaKnown RBP21.48■■□□□ 1.03
CHEK2-201ENST00000328354 MAGI3Q5TCQ9 1506 aa21.46■■□□□ 1.03
CHEK2-201ENST00000328354 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.44■■□□□ 1.02
CHEK2-201ENST00000328354 ARHGEF11O15085 1522 aa21.44■■□□□ 1.02
CHEK2-201ENST00000328354 NUP153P49790 1475 aaKnown RBP21.43■■□□□ 1.02
CHEK2-201ENST00000328354 CDK13Q14004 1512 aaKnown RBP21.42■■□□□ 1.02
CHEK2-201ENST00000328354 NCOA2Q15596 1464 aa21.42■■□□□ 1.02
CHEK2-201ENST00000328354 SHROOM2Q13796 1616 aa21.41■■□□□ 1.02
CHEK2-201ENST00000328354 FGD6Q6ZV73 1430 aa21.39■■□□□ 1.01
CHEK2-201ENST00000328354 MYOM3Q5VTT5 1437 aa21.36■■□□□ 1.01
CHEK2-201ENST00000328354 ABCA8O94911 1581 aa21.35■■□□□ 1.01
CHEK2-201ENST00000328354 PLB1Q6P1J6 1458 aa21.35■■□□□ 1.01
CHEK2-201ENST00000328354 PRG4Q92954 1404 aaPredicted RBP21.34■■□□□ 1.01
CHEK2-201ENST00000328354 CLASP1Q7Z460 1538 aa21.31■■□□□ 1
CHEK2-201ENST00000328354 FAM50AQ14320 339 aaKnown RBP21.29■■□□□ 1
CHEK2-201ENST00000328354 PTPN23Q9H3S7 1636 aa21.27■■□□□ 1
CHEK2-201ENST00000328354 TCOF1Q13428 1488 aaKnown RBP21.26■□□□□ 0.99
CHEK2-201ENST00000328354 RIMBP3CA6NJZ7 1639 aa21.26■□□□□ 0.99
CHEK2-201ENST00000328354 RIMBP3BA6NNM3 1639 aa21.26■□□□□ 0.99
CHEK2-201ENST00000328354 RIMBP3Q9UFD9 1639 aa21.26■□□□□ 0.99
CHEK2-201ENST00000328354 CDK11AQ9UQ88 783 aaPredicted RBP21.25■□□□□ 0.99
CHEK2-201ENST00000328354 ITGAEP38570 1179 aa21.24■□□□□ 0.99
CHEK2-201ENST00000328354 ADCY10Q96PN6 1610 aa21.24■□□□□ 0.99
CHEK2-201ENST00000328354 PTPRGP23470 1445 aa21.24■□□□□ 0.99
CHEK2-201ENST00000328354 MIA2Q96PC5 1412 aa21.24■□□□□ 0.99
CHEK2-201ENST00000328354 TROQ12816 1431 aaPredicted RBP21.23■□□□□ 0.99
CHEK2-201ENST00000328354 ARID3CA6NKF2 412 aa21.23■□□□□ 0.99
CHEK2-201ENST00000328354 DHX57Q6P158 1386 aaKnown RBP21.22■□□□□ 0.99
CHEK2-201ENST00000328354 CLSPNQ9HAW4 1339 aa21.22■□□□□ 0.99
CHEK2-201ENST00000328354 SETD5Q9C0A6 1442 aa21.22■□□□□ 0.99
CHEK2-201ENST00000328354 RAB3GAP2Q9H2M9 1393 aa21.19■□□□□ 0.98
CHEK2-201ENST00000328354 ATP10BO94823 1461 aa21.19■□□□□ 0.98
CHEK2-201ENST00000328354 ERCC6L2Q5T890 1561 aa21.18■□□□□ 0.98
CHEK2-201ENST00000328354 PTPRKQ15262 1439 aa21.15■□□□□ 0.98
CHEK2-201ENST00000328354 UACAQ9BZF9 1416 aa21.14■□□□□ 0.98
CHEK2-201ENST00000328354 ITSN2Q9NZM3 1697 aa21.14■□□□□ 0.97
CHEK2-201ENST00000328354 KIF14Q15058 1648 aa21.13■□□□□ 0.97
CHEK2-201ENST00000328354 HFM1A2PYH4 1435 aa21.11■□□□□ 0.97
CHEK2-201ENST00000328354 ABCC2Q92887 1545 aa21.1■□□□□ 0.97
CHEK2-201ENST00000328354 CYB5RLQ6IPT4 315 aa21.08■□□□□ 0.97
CHEK2-201ENST00000328354 PLEKHD1A6NEE1 506 aa21.07■□□□□ 0.96
CHEK2-201ENST00000328354 AKNAQ7Z591 1439 aa21.07■□□□□ 0.96
CHEK2-201ENST00000328354 GPATCH8Q9UKJ3 1502 aaKnown RBP21.07■□□□□ 0.96
CHEK2-201ENST00000328354 ABCC10Q5T3U5 1492 aa21.06■□□□□ 0.96
CHEK2-201ENST00000328354 DNMT1P26358 1616 aaKnown RBP21.05■□□□□ 0.96
CHEK2-201ENST00000328354 GCC2Q8IWJ2 1684 aa21.05■□□□□ 0.96
CHEK2-201ENST00000328354 UHRF1BP1LA0JNW5 1464 aa21.04■□□□□ 0.96
CHEK2-201ENST00000328354 NAIPQ13075 1403 aa21.04■□□□□ 0.96
CHEK2-201ENST00000328354 CDC42BPAQ5VT25 1732 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms