RNA–Protein interactions for RNA: ENST00000318524.6

NFX1-201, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 1 (best) BASIC

Gene NFX1, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-201ENST00000318524 ARAP1Q96P48 1450 aa9.77□□□□□ -0.85
NFX1-201ENST00000318524 PRXQ9BXM0 1461 aa9.77□□□□□ -0.85
NFX1-201ENST00000318524 CHIC2Q9UKJ5 165 aa9.77□□□□□ -0.85
NFX1-201ENST00000318524 ABCA10Q8WWZ4 1543 aa9.76□□□□□ -0.85
NFX1-201ENST00000318524 JPH4Q96JJ6 628 aa9.76□□□□□ -0.85
NFX1-201ENST00000318524 PRDM2Q13029 1718 aa9.72□□□□□ -0.85
NFX1-201ENST00000318524 ARHGAP35Q9NRY4 1499 aa9.71□□□□□ -0.85
NFX1-201ENST00000318524 GRIN2BQ13224 1484 aa9.7□□□□□ -0.86
NFX1-201ENST00000318524 KIF21BO75037 1637 aa9.7□□□□□ -0.86
NFX1-201ENST00000318524 IFT140Q96RY7 1462 aa9.7□□□□□ -0.86
NFX1-201ENST00000318524 MYT1LQ9UL68 1186 aa9.7□□□□□ -0.86
NFX1-201ENST00000318524 CYB5RLQ6IPT4 315 aa9.7□□□□□ -0.86
NFX1-201ENST00000318524 EIF4G3O43432 1585 aaKnown RBP9.69□□□□□ -0.86
NFX1-201ENST00000318524 VPS8Q8N3P4 1428 aa9.68□□□□□ -0.86
NFX1-201ENST00000318524 TARBP1Q13395 1621 aaKnown RBP9.68□□□□□ -0.86
NFX1-201ENST00000318524 THOC2Q8NI27 1593 aaKnown RBP9.67□□□□□ -0.86
NFX1-201ENST00000318524 MTUS2Q5JR59 1369 aa9.67□□□□□ -0.86
NFX1-201ENST00000318524 WDR62O43379 1518 aa9.66□□□□□ -0.86
NFX1-201ENST00000318524 SENP3Q9H4L4 574 aaPredicted RBP9.66□□□□□ -0.86
NFX1-201ENST00000318524 FHAD1B1AJZ9 1412 aa9.66□□□□□ -0.86
NFX1-201ENST00000318524 RRP7BPQ9NSQ0 103 aa9.65□□□□□ -0.86
NFX1-201ENST00000318524 ZNF644Q9H582 1327 aaPredicted RBP9.64□□□□□ -0.87
NFX1-201ENST00000318524 NEUROD1Q13562 356 aa9.62□□□□□ -0.87
NFX1-201ENST00000318524 GRIN2AQ12879 1464 aa9.61□□□□□ -0.87
NFX1-201ENST00000318524 PLB1Q6P1J6 1458 aa9.61□□□□□ -0.87
NFX1-201ENST00000318524 PLPPR3Q6T4P5 718 aa9.61□□□□□ -0.87
NFX1-201ENST00000318524 OSCARQ8IYS5 282 aa9.61□□□□□ -0.87
NFX1-201ENST00000318524 ABCA5Q8WWZ7 1642 aa9.61□□□□□ -0.87
NFX1-201ENST00000318524 PRG4Q92954 1404 aaPredicted RBP9.61□□□□□ -0.87
NFX1-201ENST00000318524 HRCP23327 699 aa9.6□□□□□ -0.87
NFX1-201ENST00000318524 CDK13Q14004 1512 aaKnown RBP9.6□□□□□ -0.87
NFX1-201ENST00000318524 PBRM1Q86U86 1689 aa9.59□□□□□ -0.87
NFX1-201ENST00000318524 ERICH3Q5RHP9 1530 aa9.59□□□□□ -0.87
NFX1-201ENST00000318524 TRIM52Q96A61 297 aa9.59□□□□□ -0.88
NFX1-201ENST00000318524 FOXD1Q16676 465 aa9.57□□□□□ -0.88
NFX1-201ENST00000318524 PHLDB1Q86UU1 1377 aa9.57□□□□□ -0.88
NFX1-201ENST00000318524 SYNJ2O15056 1496 aa9.56□□□□□ -0.88
NFX1-201ENST00000318524 ERCC6L2Q5T890 1561 aa9.56□□□□□ -0.88
NFX1-201ENST00000318524 ADAMTS12P58397 1594 aa9.56□□□□□ -0.88
NFX1-201ENST00000318524 PLEKHD1A6NEE1 506 aa9.56□□□□□ -0.88
NFX1-201ENST00000318524 PTPRGP23470 1445 aa9.55□□□□□ -0.88
NFX1-201ENST00000318524 PCF11O94913 1555 aaKnown RBP9.55□□□□□ -0.88
NFX1-201ENST00000318524 CNGB1Q14028 1251 aaPredicted RBP9.55□□□□□ -0.88
NFX1-201ENST00000318524 CEP170Q5SW79 1584 aa9.54□□□□□ -0.88
NFX1-201ENST00000318524 WDR97A6NE52 1622 aa9.54□□□□□ -0.88
NFX1-201ENST00000318524 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.54□□□□□ -0.884e-6■■■■□ 20.8
NFX1-201ENST00000318524 HIRIP3Q9BW71 556 aaPredicted RBP9.54□□□□□ -0.88
NFX1-201ENST00000318524 IQGAP2Q13576 1575 aa9.54□□□□□ -0.88
NFX1-201ENST00000318524 HNRNPMP52272 730 aaKnown RBP eCLIP9.53□□□□□ -0.88
NFX1-201ENST00000318524 CFDP1Q9UEE9 299 aaPredicted RBP9.53□□□□□ -0.88
NFX1-201ENST00000318524 CUL7Q14999 1698 aa9.52□□□□□ -0.89
NFX1-201ENST00000318524 SIN3AQ96ST3 1273 aa9.51□□□□□ -0.89
NFX1-201ENST00000318524 CARMIL2Q6F5E8 1435 aa9.51□□□□□ -0.89
NFX1-201ENST00000318524 NPM1P06748 294 aaKnown RBP eCLIP9.51□□□□□ -0.89
NFX1-201ENST00000318524 MAGI1Q96QZ7 1491 aaPredicted RBP9.5□□□□□ -0.89
NFX1-201ENST00000318524 CDK11AQ9UQ88 783 aaPredicted RBP9.5□□□□□ -0.89
NFX1-201ENST00000318524 FMN1Q68DA7 1419 aa9.5□□□□□ -0.89
NFX1-201ENST00000318524 KIAA0586Q9BVV6 1533 aa9.5□□□□□ -0.89
NFX1-201ENST00000318524 CHD1O14646 1710 aa9.5□□□□□ -0.89
NFX1-201ENST00000318524 CCNB3Q8WWL7 1395 aa9.49□□□□□ -0.89
NFX1-201ENST00000318524 TRHP20396 242 aaPredicted RBP9.49□□□□□ -0.89
NFX1-201ENST00000318524 ZNF326Q5BKZ1 582 aaKnown RBP9.49□□□□□ -0.89
NFX1-201ENST00000318524 DISP1Q96F81 1524 aa9.47□□□□□ -0.89
NFX1-201ENST00000318524 CTTNBP2Q8WZ74 1663 aa9.47□□□□□ -0.89
NFX1-201ENST00000318524 LRRC9Q6ZRR7 1453 aa9.46□□□□□ -0.89
NFX1-201ENST00000318524 CASKIN1Q8WXD9 1431 aa9.44□□□□□ -0.9
NFX1-201ENST00000318524 AFAP1Q8N556 730 aa9.43□□□□□ -0.9
NFX1-201ENST00000318524 EPRSP07814 1512 aaKnown RBP9.43□□□□□ -0.9
NFX1-201ENST00000318524 MLECQ14165 292 aa9.43□□□□□ -0.9
NFX1-201ENST00000318524 MAGI3Q5TCQ9 1506 aa9.42□□□□□ -0.9
NFX1-201ENST00000318524 TIAM1Q13009 1591 aa9.42□□□□□ -0.9
NFX1-201ENST00000318524 NCOA2Q15596 1464 aa9.42□□□□□ -0.9
NFX1-201ENST00000318524 POLR3GLQ9BT43 218 aa9.42□□□□□ -0.9
NFX1-201ENST00000318524 NUP160Q12769 1436 aa9.41□□□□□ -0.9
NFX1-201ENST00000318524 NUP153P49790 1475 aaKnown RBP9.41□□□□□ -0.9
NFX1-201ENST00000318524 ARHGEF11O15085 1522 aa9.41□□□□□ -0.9
NFX1-201ENST00000318524 RAB3GAP2Q9H2M9 1393 aa9.4□□□□□ -0.9
NFX1-201ENST00000318524 KIAA0556O60303 1618 aa9.4□□□□□ -0.91
NFX1-201ENST00000318524 RAPGEF3O95398 923 aa9.39□□□□□ -0.91
NFX1-201ENST00000318524 FAM69CQ0P6D2 419 aa9.39□□□□□ -0.91
NFX1-201ENST00000318524 TSPY4P0CV99 314 aa9.38□□□□□ -0.91
NFX1-201ENST00000318524 TSPY10P0CW01 314 aa9.38□□□□□ -0.91
NFX1-201ENST00000318524 FYCO1Q9BQS8 1478 aa9.38□□□□□ -0.91
NFX1-201ENST00000318524 ATP10BO94823 1461 aa9.37□□□□□ -0.91
NFX1-201ENST00000318524 RGL3Q3MIN7 710 aa9.37□□□□□ -0.91
NFX1-201ENST00000318524 EFCAB5A4FU69 1503 aa9.37□□□□□ -0.91
NFX1-201ENST00000318524 PTPRKQ15262 1439 aa9.37□□□□□ -0.91
NFX1-201ENST00000318524 KDM2AQ9Y2K7 1162 aa9.36□□□□□ -0.91
NFX1-201ENST00000318524 FGD6Q6ZV73 1430 aa9.36□□□□□ -0.91
NFX1-201ENST00000318524 UACAQ9BZF9 1416 aa9.36□□□□□ -0.91
NFX1-201ENST00000318524 SLC4A1APQ9BWU0 796 aaKnown RBP9.35□□□□□ -0.91
NFX1-201ENST00000318524 LRRIQ1Q96JM4 1722 aa9.35□□□□□ -0.91
NFX1-201ENST00000318524 GGT6Q6P531 493 aa9.34□□□□□ -0.91
NFX1-201ENST00000318524 UGGT2Q9NYU1 1516 aa9.34□□□□□ -0.91
NFX1-201ENST00000318524 SAMD9Q5K651 1589 aa9.34□□□□□ -0.91
NFX1-201ENST00000318524 CHGAP10645 457 aaKnown RBP9.34□□□□□ -0.91
NFX1-201ENST00000318524 YTHDC1Q96MU7 727 aaKnown RBP9.34□□□□□ -0.91
NFX1-201ENST00000318524 KIF14Q15058 1648 aa9.33□□□□□ -0.92
NFX1-201ENST00000318524 CCDC18Q5T9S5 1454 aa9.33□□□□□ -0.92
NFX1-201ENST00000318524 NUTM2DQ5VT03 806 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms