RNA–Protein interactions for RNA: ENST00000316485.11

PATJ-202, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 5 BASIC

Gene PATJ, Length 3,657 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-202ENST00000316485 IFT140Q96RY7 1462 aa6.93□□□□□ -1.3
PATJ-202ENST00000316485 TARBP1Q13395 1621 aaKnown RBP6.93□□□□□ -1.3
PATJ-202ENST00000316485 WDR97A6NE52 1622 aa6.93□□□□□ -1.3
PATJ-202ENST00000316485 PLPPR3Q6T4P5 718 aa6.92□□□□□ -1.3
PATJ-202ENST00000316485 THOC2Q8NI27 1593 aaKnown RBP6.92□□□□□ -1.3
PATJ-202ENST00000316485 ABCA5Q8WWZ7 1642 aa6.92□□□□□ -1.3
PATJ-202ENST00000316485 ADRA2BP18089 450 aa6.91□□□□□ -1.3
PATJ-202ENST00000316485 CUL7Q14999 1698 aa6.91□□□□□ -1.3
PATJ-202ENST00000316485 GRIN2BQ13224 1484 aa6.9□□□□□ -1.31
PATJ-202ENST00000316485 VPS8Q8N3P4 1428 aa6.9□□□□□ -1.31
PATJ-202ENST00000316485 CHMP7Q8WUX9 453 aaPredicted RBP6.89□□□□□ -1.31
PATJ-202ENST00000316485 PBRM1Q86U86 1689 aa6.88□□□□□ -1.31
PATJ-202ENST00000316485 SNAPC4Q5SXM2 1469 aa6.88□□□□□ -1.31
PATJ-202ENST00000316485 ARAP1Q96P48 1450 aa6.88□□□□□ -1.31
PATJ-202ENST00000316485 ARHGAP35Q9NRY4 1499 aa6.88□□□□□ -1.31
PATJ-202ENST00000316485 FHAD1B1AJZ9 1412 aa6.88□□□□□ -1.31
PATJ-202ENST00000316485 EIF4G3O43432 1585 aaKnown RBP6.87□□□□□ -1.31
PATJ-202ENST00000316485 FHOD3Q2V2M9 1422 aa6.86□□□□□ -1.31
PATJ-202ENST00000316485 ADAMTS12P58397 1594 aa6.85□□□□□ -1.31
PATJ-202ENST00000316485 CTTNBP2Q8WZ74 1663 aa6.84□□□□□ -1.31
PATJ-202ENST00000316485 ARID3CA6NKF2 412 aa6.83□□□□□ -1.32
PATJ-202ENST00000316485 KANK4Q5T7N3 995 aaPredicted RBP6.82□□□□□ -1.32
PATJ-202ENST00000316485 GRIN2AQ12879 1464 aa6.81□□□□□ -1.32
PATJ-202ENST00000316485 MAGI1Q96QZ7 1491 aaPredicted RBP6.81□□□□□ -1.32
PATJ-202ENST00000316485 HNRNPUL2Q1KMD3 747 aaKnown RBP6.81□□□□□ -1.32
PATJ-202ENST00000316485 SYNJ2O15056 1496 aa6.8□□□□□ -1.32
PATJ-202ENST00000316485 IQGAP2Q13576 1575 aa6.8□□□□□ -1.32
PATJ-202ENST00000316485 EFCAB5A4FU69 1503 aa6.8□□□□□ -1.32
PATJ-202ENST00000316485 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.79□□□□□ -1.32
PATJ-202ENST00000316485 FMN1Q68DA7 1419 aa6.78□□□□□ -1.32
PATJ-202ENST00000316485 ITGAEP38570 1179 aa6.78□□□□□ -1.32
PATJ-202ENST00000316485 PCF11O94913 1555 aaKnown RBP6.78□□□□□ -1.32
PATJ-202ENST00000316485 KIAA0586Q9BVV6 1533 aa6.78□□□□□ -1.32
PATJ-202ENST00000316485 JPH4Q96JJ6 628 aa6.78□□□□□ -1.32
PATJ-202ENST00000316485 HRCP23327 699 aa6.77□□□□□ -1.33
PATJ-202ENST00000316485 CEP170Q5SW79 1584 aa6.76□□□□□ -1.33
PATJ-202ENST00000316485 SAMD9Q5K651 1589 aa6.75□□□□□ -1.33
PATJ-202ENST00000316485 CASKIN1Q8WXD9 1431 aa6.75□□□□□ -1.33
PATJ-202ENST00000316485 MTUS2Q5JR59 1369 aa6.75□□□□□ -1.33
PATJ-202ENST00000316485 CCER1Q8TC90 406 aaPredicted RBP6.74□□□□□ -1.33
PATJ-202ENST00000316485 TIAM1Q13009 1591 aa6.74□□□□□ -1.33
PATJ-202ENST00000316485 FYCO1Q9BQS8 1478 aa6.74□□□□□ -1.33
PATJ-202ENST00000316485 FAM50AQ14320 339 aaKnown RBP6.74□□□□□ -1.33
PATJ-202ENST00000316485 NUP160Q12769 1436 aa6.73□□□□□ -1.33
PATJ-202ENST00000316485 CARMIL2Q6F5E8 1435 aa6.73□□□□□ -1.33
PATJ-202ENST00000316485 UGGT2Q9NYU1 1516 aa6.73□□□□□ -1.33
PATJ-202ENST00000316485 LRRC9Q6ZRR7 1453 aa6.73□□□□□ -1.33
PATJ-202ENST00000316485 CHD1O14646 1710 aa6.73□□□□□ -1.33
PATJ-202ENST00000316485 DISP1Q96F81 1524 aa6.72□□□□□ -1.33
PATJ-202ENST00000316485 KIAA0556O60303 1618 aa6.72□□□□□ -1.33
PATJ-202ENST00000316485 PRG4Q92954 1404 aaPredicted RBP6.71□□□□□ -1.34
PATJ-202ENST00000316485 CCNB3Q8WWL7 1395 aa6.7□□□□□ -1.34
PATJ-202ENST00000316485 PHLDB1Q86UU1 1377 aa6.7□□□□□ -1.34
PATJ-202ENST00000316485 CDK13Q14004 1512 aaKnown RBP6.7□□□□□ -1.34
PATJ-202ENST00000316485 MAP3K1Q13233 1512 aa6.69□□□□□ -1.34
PATJ-202ENST00000316485 CFAP43Q8NDM7 1665 aa6.69□□□□□ -1.34
PATJ-202ENST00000316485 HECW1Q76N89 1606 aa6.69□□□□□ -1.34
PATJ-202ENST00000316485 PLB1Q6P1J6 1458 aa6.69□□□□□ -1.34
PATJ-202ENST00000316485 CDK11AQ9UQ88 783 aaPredicted RBP6.68□□□□□ -1.34
PATJ-202ENST00000316485 EPRSP07814 1512 aaKnown RBP6.68□□□□□ -1.34
PATJ-202ENST00000316485 PTPRGP23470 1445 aa6.68□□□□□ -1.34
PATJ-202ENST00000316485 CCDC18Q5T9S5 1454 aa6.67□□□□□ -1.34
PATJ-202ENST00000316485 ZEB1P37275 1124 aaPredicted RBP6.66□□□□□ -1.34
PATJ-202ENST00000316485 LRRIQ1Q96JM4 1722 aa6.66□□□□□ -1.34
PATJ-202ENST00000316485 RRBP1Q9P2E9 1410 aaKnown RBP6.66□□□□□ -1.34
PATJ-202ENST00000316485 RAPGEF6Q8TEU7 1601 aa6.66□□□□□ -1.34
PATJ-202ENST00000316485 NUP153P49790 1475 aaKnown RBP6.65□□□□□ -1.34
PATJ-202ENST00000316485 NCOA2Q15596 1464 aa6.65□□□□□ -1.34
PATJ-202ENST00000316485 PLEKHD1A6NEE1 506 aa6.65□□□□□ -1.34
PATJ-202ENST00000316485 EHBP1L1Q8N3D4 1523 aa6.65□□□□□ -1.35
PATJ-202ENST00000316485 OSCARQ8IYS5 282 aa6.65□□□□□ -1.35
PATJ-202ENST00000316485 MAGI3Q5TCQ9 1506 aa6.65□□□□□ -1.35
PATJ-202ENST00000316485 ZNF777Q9ULD5 760 aaPredicted RBP6.64□□□□□ -1.35
PATJ-202ENST00000316485 ERCC6L2Q5T890 1561 aa6.64□□□□□ -1.35
PATJ-202ENST00000316485 SUPT6HQ7KZ85 1726 aaKnown RBP6.64□□□□□ -1.35
PATJ-202ENST00000316485 FGD6Q6ZV73 1430 aa6.63□□□□□ -1.35
PATJ-202ENST00000316485 CHIC2Q9UKJ5 165 aa6.63□□□□□ -1.35
PATJ-202ENST00000316485 MYOM3Q5VTT5 1437 aa6.62□□□□□ -1.35
PATJ-202ENST00000316485 KCNH8Q96L42 1107 aa6.62□□□□□ -1.35
PATJ-202ENST00000316485 UACAQ9BZF9 1416 aa6.61□□□□□ -1.35
PATJ-202ENST00000316485 TROQ12816 1431 aaPredicted RBP6.61□□□□□ -1.35
PATJ-202ENST00000316485 CFDP1Q9UEE9 299 aaPredicted RBP6.61□□□□□ -1.35
PATJ-202ENST00000316485 CLASP1Q7Z460 1538 aa6.6□□□□□ -1.35
PATJ-202ENST00000316485 ATP10BO94823 1461 aa6.6□□□□□ -1.35
PATJ-202ENST00000316485 ABCA8O94911 1581 aa6.6□□□□□ -1.35
PATJ-202ENST00000316485 RRP7BPQ9NSQ0 103 aa6.6□□□□□ -1.35
PATJ-202ENST00000316485 ZNF644Q9H582 1327 aaPredicted RBP6.6□□□□□ -1.35
PATJ-202ENST00000316485 SHROOM2Q13796 1616 aa6.6□□□□□ -1.35
PATJ-202ENST00000316485 RAB3GAP2Q9H2M9 1393 aa6.59□□□□□ -1.35
PATJ-202ENST00000316485 PTPN23Q9H3S7 1636 aa6.58□□□□□ -1.36
PATJ-202ENST00000316485 SETD5Q9C0A6 1442 aa6.58□□□□□ -1.36
PATJ-202ENST00000316485 KIF14Q15058 1648 aa6.57□□□□□ -1.36
PATJ-202ENST00000316485 NPM1P06748 294 aaKnown RBP eCLIP6.56□□□□□ -1.36
PATJ-202ENST00000316485 ARHGEF11O15085 1522 aa6.56□□□□□ -1.36
PATJ-202ENST00000316485 TRIM52Q96A61 297 aa6.56□□□□□ -1.36
PATJ-202ENST00000316485 PTPRKQ15262 1439 aa6.56□□□□□ -1.36
PATJ-202ENST00000316485 ABCC2Q92887 1545 aa6.56□□□□□ -1.36
PATJ-202ENST00000316485 DHX57Q6P158 1386 aaKnown RBP6.56□□□□□ -1.36
PATJ-202ENST00000316485 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.56□□□□□ -1.36
PATJ-202ENST00000316485 MIA2Q96PC5 1412 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms