RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 KDM6BO15054 1643 aa21.69■■□□□ 1.06
SMIM4-201ENST00000307106 MAPKBP1O60336 1514 aa21.69■■□□□ 1.06
SMIM4-201ENST00000307106 TOP2BQ02880 1626 aa21.69■■□□□ 1.06
SMIM4-201ENST00000307106 FAM69CQ0P6D2 419 aa21.68■■□□□ 1.06
SMIM4-201ENST00000307106 RUSC2Q8N2Y8 1516 aa21.65■■□□□ 1.06
SMIM4-201ENST00000307106 ADCY10Q96PN6 1610 aa21.64■■□□□ 1.05
SMIM4-201ENST00000307106 JPH4Q96JJ6 628 aa21.63■■□□□ 1.05
SMIM4-201ENST00000307106 KDM4FA0A1W2PPD8 638 aa21.62■■□□□ 1.05
SMIM4-201ENST00000307106 NPM1P06748 294 aaKnown RBP eCLIP21.61■■□□□ 1.05
SMIM4-201ENST00000307106 ILDR1Q86SU0 546 aaPredicted RBP21.58■■□□□ 1.05
SMIM4-201ENST00000307106 PPRC1Q5VV67 1664 aaKnown RBP21.42■■□□□ 1.02
SMIM4-201ENST00000307106 KIAA0586Q9BVV6 1533 aa21.39■■□□□ 1.01
SMIM4-201ENST00000307106 ADGRL1O94910 1474 aa21.37■■□□□ 1.01
SMIM4-201ENST00000307106 SUPT5HO00267 1087 aaKnown RBP21.35■■□□□ 1.01
SMIM4-201ENST00000307106 CUL7Q14999 1698 aa21.34■■□□□ 1.01
SMIM4-201ENST00000307106 GLI2P10070 1586 aa21.32■■□□□ 1
SMIM4-201ENST00000307106 HECW2Q9P2P5 1572 aa21.31■■□□□ 1
SMIM4-201ENST00000307106 ABCC2Q92887 1545 aa21.29■■□□□ 1
SMIM4-201ENST00000307106 PTPRGP23470 1445 aa21.29■■□□□ 1
SMIM4-201ENST00000307106 ASXL2Q76L83 1435 aa21.26■□□□□ 0.99
SMIM4-201ENST00000307106 PLB1Q6P1J6 1458 aa21.26■□□□□ 0.99
SMIM4-201ENST00000307106 MAP3K4Q9Y6R4 1608 aa21.24■□□□□ 0.99
SMIM4-201ENST00000307106 TTBK1Q5TCY1 1321 aaPredicted RBP21.24■□□□□ 0.99
SMIM4-201ENST00000307106 IGF1RP08069 1367 aa21.21■□□□□ 0.99
SMIM4-201ENST00000307106 TNIKQ9UKE5 1360 aa21.21■□□□□ 0.99
SMIM4-201ENST00000307106 CARMIL2Q6F5E8 1435 aa21.2■□□□□ 0.98
SMIM4-201ENST00000307106 COL17A1Q9UMD9 1497 aaPredicted RBP21.2■□□□□ 0.98
SMIM4-201ENST00000307106 KIF27Q86VH2 1401 aa21.18■□□□□ 0.98
SMIM4-201ENST00000307106 UHRF1BP1LA0JNW5 1464 aa21.17■□□□□ 0.98
SMIM4-201ENST00000307106 IQGAP2Q13576 1575 aa21.16■□□□□ 0.98
SMIM4-201ENST00000307106 EPRSP07814 1512 aaKnown RBP21.14■□□□□ 0.98
SMIM4-201ENST00000307106 TEX14Q8IWB6 1497 aa21.14■□□□□ 0.98
SMIM4-201ENST00000307106 ZCCHC11Q5TAX3 1644 aaKnown RBP21.14■□□□□ 0.97
SMIM4-201ENST00000307106 UACAQ9BZF9 1416 aa21.12■□□□□ 0.97
SMIM4-201ENST00000307106 KDM5BQ9UGL1 1544 aa21.09■□□□□ 0.97
SMIM4-201ENST00000307106 CARMIL1Q5VZK9 1371 aa21.08■□□□□ 0.96
SMIM4-201ENST00000307106 DISP1Q96F81 1524 aa21.06■□□□□ 0.96
SMIM4-201ENST00000307106 CFAP43Q8NDM7 1665 aa21■□□□□ 0.95
SMIM4-201ENST00000307106 KIF21BO75037 1637 aa21■□□□□ 0.95
SMIM4-201ENST00000307106 KIAA0556O60303 1618 aa20.99■□□□□ 0.95
SMIM4-201ENST00000307106 WDR7Q9Y4E6 1490 aa20.97■□□□□ 0.95
SMIM4-201ENST00000307106 UGGT2Q9NYU1 1516 aa20.97■□□□□ 0.95
SMIM4-201ENST00000307106 FBXO41Q8TF61 875 aa20.94■□□□□ 0.94
SMIM4-201ENST00000307106 MAGI3Q5TCQ9 1506 aa20.92■□□□□ 0.94
SMIM4-201ENST00000307106 CTTNBP2Q8WZ74 1663 aa20.89■□□□□ 0.93
SMIM4-201ENST00000307106 CD109Q6YHK3 1445 aa20.88■□□□□ 0.93
SMIM4-201ENST00000307106 RAPGEF2Q9Y4G8 1499 aa20.84■□□□□ 0.93
SMIM4-201ENST00000307106 ADAMTSL3P82987 1691 aa20.83■□□□□ 0.92
SMIM4-201ENST00000307106 ABCA8O94911 1581 aa20.81■□□□□ 0.92
SMIM4-201ENST00000307106 KCNH8Q96L42 1107 aa20.8■□□□□ 0.92
SMIM4-201ENST00000307106 ARAP3Q8WWN8 1544 aa20.78■□□□□ 0.92
SMIM4-201ENST00000307106 PTPRMP28827 1452 aa20.77■□□□□ 0.92
SMIM4-201ENST00000307106 BCORL1Q5H9F3 1711 aa20.74■□□□□ 0.91
SMIM4-201ENST00000307106 GOLGA3Q08378 1498 aa20.74■□□□□ 0.91
SMIM4-201ENST00000307106 PCF11O94913 1555 aaKnown RBP20.72■□□□□ 0.91
SMIM4-201ENST00000307106 MADDQ8WXG6 1647 aa20.71■□□□□ 0.91
SMIM4-201ENST00000307106 ABCA9Q8IUA7 1624 aa20.69■□□□□ 0.9
SMIM4-201ENST00000307106 LMTK3Q96Q04 1460 aa20.66■□□□□ 0.9
SMIM4-201ENST00000307106 RIMS1Q86UR5 1692 aaKnown RBP20.65■□□□□ 0.9
SMIM4-201ENST00000307106 PHLDB1Q86UU1 1377 aa20.62■□□□□ 0.89
SMIM4-201ENST00000307106 FRMPD1Q5SYB0 1578 aa20.62■□□□□ 0.89
SMIM4-201ENST00000307106 RAPGEF3O95398 923 aa20.59■□□□□ 0.89
SMIM4-201ENST00000307106 ATP10BO94823 1461 aa20.58■□□□□ 0.89
SMIM4-201ENST00000307106 NEO1Q92859 1461 aa20.58■□□□□ 0.89
SMIM4-201ENST00000307106 ARID3CA6NKF2 412 aa20.58■□□□□ 0.89
SMIM4-201ENST00000307106 ARID4BQ4LE39 1312 aaPredicted RBP20.56■□□□□ 0.88
SMIM4-201ENST00000307106 RICTORQ6R327 1708 aa20.55■□□□□ 0.88
SMIM4-201ENST00000307106 ARHGEF40Q8TER5 1519 aa20.54■□□□□ 0.88
SMIM4-201ENST00000307106 FAM9AQ8IZU1 332 aaPredicted RBP20.51■□□□□ 0.87
SMIM4-201ENST00000307106 RAPGEF6Q8TEU7 1601 aa20.51■□□□□ 0.87
SMIM4-201ENST00000307106 HSPA2P54652 639 aa20.48■□□□□ 0.87
SMIM4-201ENST00000307106 FER1L4A9Z1Z3 1794 aa20.48■□□□□ 0.87
SMIM4-201ENST00000307106 SIGLEC1Q9BZZ2 1709 aa20.47■□□□□ 0.87
SMIM4-201ENST00000307106 PRXQ9BXM0 1461 aa20.46■□□□□ 0.87
SMIM4-201ENST00000307106 P3H3Q8IVL6 736 aa20.46■□□□□ 0.87
SMIM4-201ENST00000307106 CERKQ8TCT0 537 aa20.45■□□□□ 0.86
SMIM4-201ENST00000307106 SAMD9Q5K651 1589 aa20.45■□□□□ 0.86
SMIM4-201ENST00000307106 CFAP74Q9C0B2 1584 aa20.45■□□□□ 0.86
SMIM4-201ENST00000307106 PLPPR3Q6T4P5 718 aa20.43■□□□□ 0.86
SMIM4-201ENST00000307106 FANCAO15360 1455 aa20.42■□□□□ 0.86
SMIM4-201ENST00000307106 DENND4BO75064 1496 aaPredicted RBP20.42■□□□□ 0.86
SMIM4-201ENST00000307106 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.41■□□□□ 0.86
SMIM4-201ENST00000307106 HNRNPUL2Q1KMD3 747 aaKnown RBP20.41■□□□□ 0.86
SMIM4-201ENST00000307106 POGZQ7Z3K3 1410 aa20.41■□□□□ 0.86
SMIM4-201ENST00000307106 ZMYM4Q5VZL5 1548 aa20.39■□□□□ 0.85
SMIM4-201ENST00000307106 PREX1Q8TCU6 1659 aa20.38■□□□□ 0.85
SMIM4-201ENST00000307106 TTC37Q6PGP7 1564 aa20.38■□□□□ 0.85
SMIM4-201ENST00000307106 EFCAB5A4FU69 1503 aa20.37■□□□□ 0.85
SMIM4-201ENST00000307106 ZFYVE16Q7Z3T8 1539 aa20.37■□□□□ 0.85
SMIM4-201ENST00000307106 FHOD3Q2V2M9 1422 aa20.37■□□□□ 0.85
SMIM4-201ENST00000307106 AKNAQ7Z591 1439 aa20.37■□□□□ 0.85
SMIM4-201ENST00000307106 DISP3Q9P2K9 1392 aa20.36■□□□□ 0.85
SMIM4-201ENST00000307106 NUP153P49790 1475 aaKnown RBP20.36■□□□□ 0.85
SMIM4-201ENST00000307106 ILDR2Q71H61 639 aa20.35■□□□□ 0.85
SMIM4-201ENST00000307106 STRCQ7RTU9 1775 aa20.33■□□□□ 0.84
SMIM4-201ENST00000307106 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.32■□□□□ 0.84
SMIM4-201ENST00000307106 SOCS7O14512 581 aa20.32■□□□□ 0.84
SMIM4-201ENST00000307106 YEATS2Q9ULM3 1422 aa20.32■□□□□ 0.84
SMIM4-201ENST00000307106 HECW1Q76N89 1606 aa20.31■□□□□ 0.84
SMIM4-201ENST00000307106 MAGI2Q86UL8 1455 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms