RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 TOP2BQ02880 1626 aa26.44■■□□□ 1.82
CHRNB1-201ENST00000306071 PEG3Q9GZU2 1588 aa26.43■■□□□ 1.82
CHRNB1-201ENST00000306071 SETD5Q9C0A6 1442 aa26.42■■□□□ 1.82
CHRNB1-201ENST00000306071 IRX6P78412 446 aaPredicted RBP26.36■■□□□ 1.81
CHRNB1-201ENST00000306071 PABPN1Q86U42 306 aaKnown RBP eCLIP26.33■■□□□ 1.81
CHRNB1-201ENST00000306071 TIMELESSQ9UNS1 1208 aa26.32■■□□□ 1.8
CHRNB1-201ENST00000306071 MYT1LQ9UL68 1186 aa26.31■■□□□ 1.8
CHRNB1-201ENST00000306071 ARHGAP35Q9NRY4 1499 aa26.3■■□□□ 1.8
CHRNB1-201ENST00000306071 BIVM-ERCC5R4GMW8 1640 aa26.28■■□□□ 1.8
CHRNB1-201ENST00000306071 HNRNPUQ00839 825 aaKnown RBP eCLIP26.28■■□□□ 1.8
CHRNB1-201ENST00000306071 FAM50AQ14320 339 aaKnown RBP26.25■■□□□ 1.79
CHRNB1-201ENST00000306071 DEKP35659 375 aaKnown RBP26.24■■□□□ 1.79
CHRNB1-201ENST00000306071 ATAD2BQ9ULI0 1458 aa26.22■■□□□ 1.79
CHRNB1-201ENST00000306071 TIAM1Q13009 1591 aa26.18■■□□□ 1.78
CHRNB1-201ENST00000306071 KIF27Q86VH2 1401 aa26.17■■□□□ 1.78
CHRNB1-201ENST00000306071 PHLDB1Q86UU1 1377 aa26.14■■□□□ 1.78
CHRNB1-201ENST00000306071 PPP4R2Q9NY27 417 aa26.14■■□□□ 1.77
CHRNB1-201ENST00000306071 PRKCSHP14314 528 aaPredicted RBP26.13■■□□□ 1.77
CHRNB1-201ENST00000306071 ERICH6BQ5W0A0 696 aa26.12■■□□□ 1.77
CHRNB1-201ENST00000306071 BICRAQ9NZM4 1560 aa26.12■■□□□ 1.77
CHRNB1-201ENST00000306071 TONSLQ96HA7 1378 aa26.11■■□□□ 1.77
CHRNB1-201ENST00000306071 LRRC9Q6ZRR7 1453 aa26.1■■□□□ 1.77
CHRNB1-201ENST00000306071 MAP3K1Q13233 1512 aa26.1■■□□□ 1.77
CHRNB1-201ENST00000306071 CUX1P39880 1505 aa26.01■■□□□ 1.75
CHRNB1-201ENST00000306071 NBR1Q14596 966 aa26.01■■□□□ 1.75
CHRNB1-201ENST00000306071 B4GALNT3Q6L9W6 998 aa26■■□□□ 1.75
CHRNB1-201ENST00000306071 NOP58Q9Y2X3 529 aaKnown RBP26■■□□□ 1.75
CHRNB1-201ENST00000306071 ATP1B4Q9UN42 357 aaPredicted RBP25.95■■□□□ 1.74
CHRNB1-201ENST00000306071 PAK3O75914 559 aaPredicted RBP25.89■■□□□ 1.74
CHRNB1-201ENST00000306071 FHAD1B1AJZ9 1412 aa25.87■■□□□ 1.73
CHRNB1-201ENST00000306071 CFAP43Q8NDM7 1665 aa25.86■■□□□ 1.73
CHRNB1-201ENST00000306071 WASHC2AQ641Q2 1341 aa25.84■■□□□ 1.73
CHRNB1-201ENST00000306071 CCDC184Q52MB2 194 aa25.83■■□□□ 1.73
CHRNB1-201ENST00000306071 FAM9BQ8IZU0 186 aa25.83■■□□□ 1.73
CHRNB1-201ENST00000306071 P3H3Q8IVL6 736 aa25.82■■□□□ 1.72
CHRNB1-201ENST00000306071 CCDC18Q5T9S5 1454 aa25.82■■□□□ 1.72
CHRNB1-201ENST00000306071 PCF11O94913 1555 aaKnown RBP25.8■■□□□ 1.72
CHRNB1-201ENST00000306071 IGF1RP08069 1367 aa25.8■■□□□ 1.72
CHRNB1-201ENST00000306071 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.79■■□□□ 1.72
CHRNB1-201ENST00000306071 HSPA5P11021 654 aaKnown RBP25.79■■□□□ 1.72
CHRNB1-201ENST00000306071 UACAQ9BZF9 1416 aa25.78■■□□□ 1.72
CHRNB1-201ENST00000306071 RTL5Q5HYW3 569 aaPredicted RBP25.78■■□□□ 1.72
CHRNB1-201ENST00000306071 ANO8Q9HCE9 1232 aaPredicted RBP25.78■■□□□ 1.72
CHRNB1-201ENST00000306071 ANP32AP39687 249 aaKnown RBP25.76■■□□□ 1.71
CHRNB1-201ENST00000306071 ZBED9Q6R2W3 1325 aa25.76■■□□□ 1.71
CHRNB1-201ENST00000306071 CARMIL1Q5VZK9 1371 aa25.74■■□□□ 1.71
CHRNB1-201ENST00000306071 MRS2Q9HD23 443 aa25.74■■□□□ 1.71
CHRNB1-201ENST00000306071 CNTLNQ9NXG0 1405 aa25.72■■□□□ 1.71
CHRNB1-201ENST00000306071 IPO9Q96P70 1041 aaKnown RBP25.71■■□□□ 1.71
CHRNB1-201ENST00000306071 KDM5BQ9UGL1 1544 aa25.7■■□□□ 1.7
CHRNB1-201ENST00000306071 EIF4G2P78344 907 aaKnown RBP eCLIP25.69■■□□□ 1.7
CHRNB1-201ENST00000306071 PRKRIP1Q9H875 184 aaPredicted RBP25.69■■□□□ 1.7
CHRNB1-201ENST00000306071 ZBTB47Q9UFB7 747 aaPredicted RBP25.69■■□□□ 1.7
CHRNB1-201ENST00000306071 HFM1A2PYH4 1435 aa25.69■■□□□ 1.7
CHRNB1-201ENST00000306071 FGD6Q6ZV73 1430 aa25.69■■□□□ 1.7
CHRNB1-201ENST00000306071 NCOA2Q15596 1464 aa25.67■■□□□ 1.7
CHRNB1-201ENST00000306071 PTPN23Q9H3S7 1636 aa25.66■■□□□ 1.7
CHRNB1-201ENST00000306071 CCDC136Q96JN2 1154 aa25.63■■□□□ 1.69
CHRNB1-201ENST00000306071 FHOD3Q2V2M9 1422 aa25.63■■□□□ 1.69
CHRNB1-201ENST00000306071 FYCO1Q9BQS8 1478 aa25.63■■□□□ 1.69
CHRNB1-201ENST00000306071 PTPRKQ15262 1439 aa25.63■■□□□ 1.69
CHRNB1-201ENST00000306071 SALL2Q9Y467 1007 aaPredicted RBP25.62■■□□□ 1.69
CHRNB1-201ENST00000306071 AQRO60306 1485 aaKnown RBP eCLIP25.6■■□□□ 1.69
CHRNB1-201ENST00000306071 NAIPQ13075 1403 aa25.59■■□□□ 1.69
CHRNB1-201ENST00000306071 CFTRP13569 1480 aa25.58■■□□□ 1.69
CHRNB1-201ENST00000306071 CASKIN1Q8WXD9 1431 aa25.58■■□□□ 1.68
CHRNB1-201ENST00000306071 AKNAQ7Z591 1439 aa25.57■■□□□ 1.68
CHRNB1-201ENST00000306071 C11orf95C9JLR9 678 aaPredicted RBP25.56■■□□□ 1.68
CHRNB1-201ENST00000306071 IL27Q8NEV9 243 aa25.56■■□□□ 1.68
CHRNB1-201ENST00000306071 CCDC7Q96M83 1385 aa25.56■■□□□ 1.68
CHRNB1-201ENST00000306071 FGD5Q6ZNL6 1462 aa25.55■■□□□ 1.68
CHRNB1-201ENST00000306071 FMN1Q68DA7 1419 aa25.55■■□□□ 1.68
CHRNB1-201ENST00000306071 MTUS2Q5JR59 1369 aa25.52■■□□□ 1.68
CHRNB1-201ENST00000306071 SMG6Q86US8 1419 aaKnown RBP25.52■■□□□ 1.68
CHRNB1-201ENST00000306071 NCOA1Q15788 1441 aa25.51■■□□□ 1.67
CHRNB1-201ENST00000306071 RTN4Q9NQC3 1192 aaKnown RBP25.51■■□□□ 1.67
CHRNB1-201ENST00000306071 HMGXB3Q12766 1538 aa25.5■■□□□ 1.67
CHRNB1-201ENST00000306071 NUDCQ9Y266 331 aa25.48■■□□□ 1.67
CHRNB1-201ENST00000306071 NCAPD3P42695 1498 aa25.46■■□□□ 1.67
CHRNB1-201ENST00000306071 RRP7BPQ9NSQ0 103 aa25.45■■□□□ 1.66
CHRNB1-201ENST00000306071 EFCAB5A4FU69 1503 aa25.44■■□□□ 1.66
CHRNB1-201ENST00000306071 L3MBTL2Q969R5 705 aa25.44■■□□□ 1.66
CHRNB1-201ENST00000306071 NPM2Q86SE8 214 aaKnown RBP25.43■■□□□ 1.66
CHRNB1-201ENST00000306071 RNF123Q5XPI4 1314 aa25.43■■□□□ 1.66
CHRNB1-201ENST00000306071 CNGB1Q14028 1251 aaPredicted RBP25.41■■□□□ 1.66
CHRNB1-201ENST00000306071 MYOM3Q5VTT5 1437 aa25.4■■□□□ 1.66
CHRNB1-201ENST00000306071 CHIC2Q9UKJ5 165 aa25.39■■□□□ 1.66
CHRNB1-201ENST00000306071 NEFMP07197 916 aa25.39■■□□□ 1.65
CHRNB1-201ENST00000306071 KIF7Q2M1P5 1343 aa25.39■■□□□ 1.65
CHRNB1-201ENST00000306071 LAS1LQ9Y4W2 734 aaKnown RBP25.38■■□□□ 1.65
CHRNB1-201ENST00000306071 DENND4BO75064 1496 aaPredicted RBP25.36■■□□□ 1.65
CHRNB1-201ENST00000306071 HECW1Q76N89 1606 aa25.35■■□□□ 1.65
CHRNB1-201ENST00000306071 SENP3-EIF4A1A0A087X0R7 540 aa25.34■■□□□ 1.65
CHRNB1-201ENST00000306071 PRDM2Q13029 1718 aa25.34■■□□□ 1.65
CHRNB1-201ENST00000306071 USP35Q9P2H5 1018 aa25.33■■□□□ 1.65
CHRNB1-201ENST00000306071 MPHOSPH9Q99550 1183 aa25.32■■□□□ 1.64
CHRNB1-201ENST00000306071 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.32■■□□□ 1.64
CHRNB1-201ENST00000306071 SNAPC4Q5SXM2 1469 aa25.32■■□□□ 1.64
CHRNB1-201ENST00000306071 FOXD1Q16676 465 aa25.31■■□□□ 1.64
CHRNB1-201ENST00000306071 NBPF8Q3BBV2 869 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 198.9 ms