RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 NISCHQ9Y2I1 1504 aa35.9■■■■□ 3.34
CHRNB1-201ENST00000306071 HRCP23327 699 aa31.85■■■□□ 2.69
CHRNB1-201ENST00000306071 SHROOM4Q9ULL8 1493 aa31.72■■■□□ 2.67
CHRNB1-201ENST00000306071 SUPT5HO00267 1087 aaKnown RBP31.59■■■□□ 2.65
CHRNB1-201ENST00000306071 PCGF6Q9BYE7 350 aa31.26■■■□□ 2.6
CHRNB1-201ENST00000306071 MYO15BQ96JP2 1530 aa31.18■■■□□ 2.58
CHRNB1-201ENST00000306071 PPARGC1BQ86YN6 1023 aaKnown RBP31.15■■■□□ 2.58
CHRNB1-201ENST00000306071 CHIC1Q5VXU3 224 aa31.03■■■□□ 2.56
CHRNB1-201ENST00000306071 PELP1Q8IZL8 1130 aaKnown RBP30.62■■■□□ 2.49
CHRNB1-201ENST00000306071 DCAF1Q9Y4B6 1507 aa30.56■■■□□ 2.48
CHRNB1-201ENST00000306071 ZCCHC6Q5VYS8 1495 aaKnown RBP30.53■■■□□ 2.48
CHRNB1-201ENST00000306071 TRIM26Q12899 539 aaPredicted RBP30.3■■■□□ 2.44
CHRNB1-201ENST00000306071 LOC105371045A0A1W2PR82 267 aa30.3■■■□□ 2.44
CHRNB1-201ENST00000306071 CCDC180Q9P1Z9 1646 aa30.19■■■□□ 2.42
CHRNB1-201ENST00000306071 ZEB1P37275 1124 aaPredicted RBP30.06■■■□□ 2.4
CHRNB1-201ENST00000306071 SCAF1Q9H7N4 1312 aaKnown RBP30.05■■■□□ 2.4
CHRNB1-201ENST00000306071 DCAF8L2P0C7V8 631 aa29.94■■■□□ 2.38
CHRNB1-201ENST00000306071 MYT1Q01538 1121 aa29.42■■■□□ 2.3
CHRNB1-201ENST00000306071 ACIN1Q9UKV3 1341 aaKnown RBP29.38■■■□□ 2.29
CHRNB1-201ENST00000306071 NEUROD1Q13562 356 aa29.28■■■□□ 2.28
CHRNB1-201ENST00000306071 TRIM41Q8WV44 630 aa29.25■■■□□ 2.27
CHRNB1-201ENST00000306071 FAM9AQ8IZU1 332 aaPredicted RBP29.21■■■□□ 2.27
CHRNB1-201ENST00000306071 GTF3C3Q9Y5Q9 886 aa29.14■■■□□ 2.26
CHRNB1-201ENST00000306071 CENPBP07199 599 aaPredicted RBP29.09■■■□□ 2.25
CHRNB1-201ENST00000306071 EHMT2Q96KQ7 1210 aa29.08■■■□□ 2.25
CHRNB1-201ENST00000306071 ABCC9O60706 1549 aa29.02■■■□□ 2.24
CHRNB1-201ENST00000306071 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.01■■■□□ 2.23
CHRNB1-201ENST00000306071 CCER1Q8TC90 406 aaPredicted RBP29■■■□□ 2.23
CHRNB1-201ENST00000306071 DIEXFQ68CQ4 756 aaKnown RBP28.96■■■□□ 2.23
CHRNB1-201ENST00000306071 RSF1Q96T23 1441 aaPredicted RBP28.86■■■□□ 2.21
CHRNB1-201ENST00000306071 RB1CC1Q8TDY2 1594 aa28.76■■■□□ 2.19
CHRNB1-201ENST00000306071 YTHDC1Q96MU7 727 aaKnown RBP28.49■■■□□ 2.15
CHRNB1-201ENST00000306071 SCRIBQ14160 1630 aa28.48■■■□□ 2.15
CHRNB1-201ENST00000306071 ZNF316A6NFI3 1004 aaPredicted RBP28.42■■■□□ 2.14
CHRNB1-201ENST00000306071 TTBK1Q5TCY1 1321 aaPredicted RBP28.39■■■□□ 2.14
CHRNB1-201ENST00000306071 MIER1Q8N108 512 aa28.2■■■□□ 2.1
CHRNB1-201ENST00000306071 WRNQ14191 1432 aaPredicted RBP eCLIP28.17■■■□□ 2.1
CHRNB1-201ENST00000306071 CECR2Q9BXF3 1484 aa28.06■■■□□ 2.08
CHRNB1-201ENST00000306071 CEP162Q5TB80 1403 aa28.04■■■□□ 2.08
CHRNB1-201ENST00000306071 MROH2BQ7Z745 1585 aa28.03■■■□□ 2.08
CHRNB1-201ENST00000306071 WIZO95785 1651 aa27.97■■■□□ 2.07
CHRNB1-201ENST00000306071 EIF4G1Q04637 1599 aaKnown RBP27.86■■■□□ 2.05
CHRNB1-201ENST00000306071 TNIKQ9UKE5 1360 aa27.86■■■□□ 2.05
CHRNB1-201ENST00000306071 HNRNPUL2Q1KMD3 747 aaKnown RBP27.81■■■□□ 2.04
CHRNB1-201ENST00000306071 CCDC88BA6NC98 1476 aa27.8■■■□□ 2.04
CHRNB1-201ENST00000306071 UBTFP17480 764 aaKnown RBP27.78■■■□□ 2.04
CHRNB1-201ENST00000306071 ABCC8Q09428 1581 aa27.77■■■□□ 2.04
CHRNB1-201ENST00000306071 BAZ1AQ9NRL2 1556 aaPredicted RBP27.77■■■□□ 2.04
CHRNB1-201ENST00000306071 CLSPNQ9HAW4 1339 aa27.76■■■□□ 2.04
CHRNB1-201ENST00000306071 SUPT16HQ9Y5B9 1047 aaKnown RBP27.76■■■□□ 2.03
CHRNB1-201ENST00000306071 SOGA1O94964 1423 aa27.72■■■□□ 2.03
CHRNB1-201ENST00000306071 CSRNP3Q8WYN3 585 aa27.65■■■□□ 2.02
CHRNB1-201ENST00000306071 ANP32EQ9BTT0 268 aa27.63■■■□□ 2.01
CHRNB1-201ENST00000306071 TSHZ2Q9NRE2 1034 aa27.59■■■□□ 2.01
CHRNB1-201ENST00000306071 EEA1Q15075 1411 aa27.57■■■□□ 2
CHRNB1-201ENST00000306071 GOLGA3Q08378 1498 aa27.53■■■□□ 2
CHRNB1-201ENST00000306071 RUSC2Q8N2Y8 1516 aa27.53■■■□□ 2
CHRNB1-201ENST00000306071 NACADO15069 1562 aa27.48■■□□□ 1.99
CHRNB1-201ENST00000306071 BCL11AQ9H165 835 aa27.48■■□□□ 1.99
CHRNB1-201ENST00000306071 TOP2AP11388 1531 aaKnown RBP27.43■■□□□ 1.98
CHRNB1-201ENST00000306071 APLP2Q06481 763 aa27.38■■□□□ 1.97
CHRNB1-201ENST00000306071 SMARCA2P51531 1590 aa27.34■■□□□ 1.97
CHRNB1-201ENST00000306071 CLIP1P30622 1438 aa27.31■■□□□ 1.96
CHRNB1-201ENST00000306071 VPS8Q8N3P4 1428 aa27.27■■□□□ 1.96
CHRNB1-201ENST00000306071 CEP164Q9UPV0 1460 aa27.25■■□□□ 1.95
CHRNB1-201ENST00000306071 DHX57Q6P158 1386 aaKnown RBP27.23■■□□□ 1.95
CHRNB1-201ENST00000306071 BCANQ96GW7 911 aa27.2■■□□□ 1.94
CHRNB1-201ENST00000306071 KIF21BO75037 1637 aa27.15■■□□□ 1.94
CHRNB1-201ENST00000306071 SMARCA4P51532 1647 aa27.14■■□□□ 1.93
CHRNB1-201ENST00000306071 RANGAP1P46060 587 aaPredicted RBP27.12■■□□□ 1.93
CHRNB1-201ENST00000306071 KCNH8Q96L42 1107 aa27.08■■□□□ 1.93
CHRNB1-201ENST00000306071 FKBP8Q14318 412 aa27.08■■□□□ 1.93
CHRNB1-201ENST00000306071 BAZ1BQ9UIG0 1483 aaKnown RBP27.01■■□□□ 1.91
CHRNB1-201ENST00000306071 RBM19Q9Y4C8 960 aaKnown RBP26.98■■□□□ 1.91
CHRNB1-201ENST00000306071 RAPGEF2Q9Y4G8 1499 aa26.96■■□□□ 1.91
CHRNB1-201ENST00000306071 SYNJ1O43426 1573 aa26.92■■□□□ 1.9
CHRNB1-201ENST00000306071 NEFLP07196 543 aa26.92■■□□□ 1.9
CHRNB1-201ENST00000306071 KANK4Q5T7N3 995 aaPredicted RBP26.82■■□□□ 1.88
CHRNB1-201ENST00000306071 ITGAEP38570 1179 aa26.79■■□□□ 1.88
CHRNB1-201ENST00000306071 DDX10Q13206 875 aaKnown RBP26.78■■□□□ 1.88
CHRNB1-201ENST00000306071 RRBP1Q9P2E9 1410 aaKnown RBP26.75■■□□□ 1.87
CHRNB1-201ENST00000306071 CUX2O14529 1486 aa26.72■■□□□ 1.87
CHRNB1-201ENST00000306071 ARAP1Q96P48 1450 aa26.69■■□□□ 1.86
CHRNB1-201ENST00000306071 TRIM52Q96A61 297 aa26.68■■□□□ 1.86
CHRNB1-201ENST00000306071 MSH5O43196 834 aa26.68■■□□□ 1.86
CHRNB1-201ENST00000306071 CCNB3Q8WWL7 1395 aa26.67■■□□□ 1.86
CHRNB1-201ENST00000306071 RAB3GAP2Q9H2M9 1393 aa26.6■■□□□ 1.85
CHRNB1-201ENST00000306071 MAPKBP1O60336 1514 aa26.59■■□□□ 1.85
CHRNB1-201ENST00000306071 ERICH6Q7L0X2 663 aa26.58■■□□□ 1.85
CHRNB1-201ENST00000306071 PPP1R15AO75807 674 aaPredicted RBP26.57■■□□□ 1.84
CHRNB1-201ENST00000306071 WDR97A6NE52 1622 aa26.55■■□□□ 1.84
CHRNB1-201ENST00000306071 CCER2I3L3R5 266 aa26.55■■□□□ 1.84
CHRNB1-201ENST00000306071 ANP32CO43423 234 aa26.54■■□□□ 1.84
CHRNB1-201ENST00000306071 UNC13AQ9UPW8 1703 aa26.54■■□□□ 1.84
CHRNB1-201ENST00000306071 ERICH3Q5RHP9 1530 aa26.53■■□□□ 1.84
CHRNB1-201ENST00000306071 FANCIQ9NVI1 1328 aa26.52■■□□□ 1.84
CHRNB1-201ENST00000306071 SIN3AQ96ST3 1273 aa26.49■■□□□ 1.83
CHRNB1-201ENST00000306071 HIRIP3Q9BW71 556 aaPredicted RBP26.48■■□□□ 1.83
CHRNB1-201ENST00000306071 CDK11AQ9UQ88 783 aaPredicted RBP26.48■■□□□ 1.83
CHRNB1-201ENST00000306071 PRXQ9BXM0 1461 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms