RNA–Protein interactions for RNA: ENST00000304621.10

TTC39C-201, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTC39C, Length 2,304 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-201ENST00000304621 ADAMTS12P58397 1594 aa9.25□□□□□ -0.93
TTC39C-201ENST00000304621 RANGAP1P46060 587 aaPredicted RBP9.24□□□□□ -0.93
TTC39C-201ENST00000304621 CLIP1P30622 1438 aa9.23□□□□□ -0.93
TTC39C-201ENST00000304621 SNAPC4Q5SXM2 1469 aa9.23□□□□□ -0.93
TTC39C-201ENST00000304621 FHAD1B1AJZ9 1412 aa9.21□□□□□ -0.93
TTC39C-201ENST00000304621 CTTNBP2Q8WZ74 1663 aa9.2□□□□□ -0.94
TTC39C-201ENST00000304621 ARAP1Q96P48 1450 aa9.2□□□□□ -0.94
TTC39C-201ENST00000304621 ARHGAP35Q9NRY4 1499 aa9.19□□□□□ -0.94
TTC39C-201ENST00000304621 MAGI1Q96QZ7 1491 aaPredicted RBP9.17□□□□□ -0.94
TTC39C-201ENST00000304621 GRIN2AQ12879 1464 aa9.16□□□□□ -0.94
TTC39C-201ENST00000304621 PPARGC1BQ86YN6 1023 aaKnown RBP9.15□□□□□ -0.95
TTC39C-201ENST00000304621 VPS8Q8N3P4 1428 aa9.15□□□□□ -0.95
TTC39C-201ENST00000304621 SYNJ2O15056 1496 aa9.14□□□□□ -0.95
TTC39C-201ENST00000304621 CEP170Q5SW79 1584 aa9.13□□□□□ -0.95
TTC39C-201ENST00000304621 P3H3Q8IVL6 736 aa9.12□□□□□ -0.95
TTC39C-201ENST00000304621 IQGAP2Q13576 1575 aa9.12□□□□□ -0.95
TTC39C-201ENST00000304621 FHOD3Q2V2M9 1422 aa9.11□□□□□ -0.95
TTC39C-201ENST00000304621 SAMD9Q5K651 1589 aa9.11□□□□□ -0.95
TTC39C-201ENST00000304621 CHD1O14646 1710 aa9.1□□□□□ -0.95
TTC39C-201ENST00000304621 FBLN2P98095 1184 aa9.1□□□□□ -0.95
TTC39C-201ENST00000304621 CHMP7Q8WUX9 453 aaPredicted RBP9.1□□□□□ -0.95
TTC39C-201ENST00000304621 NUP160Q12769 1436 aa9.1□□□□□ -0.95
TTC39C-201ENST00000304621 EFCAB5A4FU69 1503 aa9.1□□□□□ -0.95
TTC39C-201ENST00000304621 KIAA0586Q9BVV6 1533 aa9.09□□□□□ -0.95
TTC39C-201ENST00000304621 UGGT2Q9NYU1 1516 aa9.07□□□□□ -0.96
TTC39C-201ENST00000304621 TTBK1Q5TCY1 1321 aaPredicted RBP9.07□□□□□ -0.96
TTC39C-201ENST00000304621 PCF11O94913 1555 aaKnown RBP9.07□□□□□ -0.96
TTC39C-201ENST00000304621 SCAF1Q9H7N4 1312 aaKnown RBP9.06□□□□□ -0.96
TTC39C-201ENST00000304621 DISP1Q96F81 1524 aa9.06□□□□□ -0.96
TTC39C-201ENST00000304621 KIAA0556O60303 1618 aa9.04□□□□□ -0.96
TTC39C-201ENST00000304621 PPP4R3CPQ6ZMV5 832 aa9.04□□□□□ -0.96
TTC39C-201ENST00000304621 PCGF6Q9BYE7 350 aa9.04□□□□□ -0.96
TTC39C-201ENST00000304621 TRIM26Q12899 539 aaPredicted RBP9.02□□□□□ -0.97
TTC39C-201ENST00000304621 KANK4Q5T7N3 995 aaPredicted RBP9.02□□□□□ -0.97
TTC39C-201ENST00000304621 LRRIQ1Q96JM4 1722 aa9.01□□□□□ -0.97
TTC39C-201ENST00000304621 CASKIN1Q8WXD9 1431 aa9.01□□□□□ -0.97
TTC39C-201ENST00000304621 TIAM1Q13009 1591 aa9□□□□□ -0.97
TTC39C-201ENST00000304621 FYCO1Q9BQS8 1478 aa9□□□□□ -0.97
TTC39C-201ENST00000304621 JPH4Q96JJ6 628 aa9□□□□□ -0.97
TTC39C-201ENST00000304621 FMN1Q68DA7 1419 aa9□□□□□ -0.97
TTC39C-201ENST00000304621 CFAP43Q8NDM7 1665 aa9□□□□□ -0.97
TTC39C-201ENST00000304621 CLASP1Q7Z460 1538 aa8.99□□□□□ -0.97
TTC39C-201ENST00000304621 SHROOM2Q13796 1616 aa8.99□□□□□ -0.97
TTC39C-201ENST00000304621 APLP2Q06481 763 aa8.98□□□□□ -0.97
TTC39C-201ENST00000304621 ERCC6L2Q5T890 1561 aa8.98□□□□□ -0.97
TTC39C-201ENST00000304621 MAP3K1Q13233 1512 aa8.97□□□□□ -0.97
TTC39C-201ENST00000304621 ATP1B4Q9UN42 357 aaPredicted RBP8.97□□□□□ -0.97
TTC39C-201ENST00000304621 PRG4Q92954 1404 aaPredicted RBP8.97□□□□□ -0.97
TTC39C-201ENST00000304621 LRRC9Q6ZRR7 1453 aa8.95□□□□□ -0.98
TTC39C-201ENST00000304621 HECW1Q76N89 1606 aa8.94□□□□□ -0.98
TTC39C-201ENST00000304621 CDK13Q14004 1512 aaKnown RBP8.94□□□□□ -0.98
TTC39C-201ENST00000304621 PLB1Q6P1J6 1458 aa8.94□□□□□ -0.98
TTC39C-201ENST00000304621 CARMIL2Q6F5E8 1435 aa8.94□□□□□ -0.98
TTC39C-201ENST00000304621 RAPGEF6Q8TEU7 1601 aa8.94□□□□□ -0.98
TTC39C-201ENST00000304621 MAGI3Q5TCQ9 1506 aa8.94□□□□□ -0.98
TTC39C-201ENST00000304621 NUP153P49790 1475 aaKnown RBP8.93□□□□□ -0.98
TTC39C-201ENST00000304621 ARID3CA6NKF2 412 aa8.93□□□□□ -0.98
TTC39C-201ENST00000304621 EPRSP07814 1512 aaKnown RBP8.92□□□□□ -0.98
TTC39C-201ENST00000304621 ABCA8O94911 1581 aa8.91□□□□□ -0.98
TTC39C-201ENST00000304621 MAPK8IP2Q13387 824 aaPredicted RBP8.9□□□□□ -0.98
TTC39C-201ENST00000304621 CCDC18Q5T9S5 1454 aa8.9□□□□□ -0.99
TTC39C-201ENST00000304621 PHLDB1Q86UU1 1377 aa8.89□□□□□ -0.99
TTC39C-201ENST00000304621 PTPRGP23470 1445 aa8.89□□□□□ -0.99
TTC39C-201ENST00000304621 EHBP1L1Q8N3D4 1523 aa8.87□□□□□ -0.99
TTC39C-201ENST00000304621 RRBP1Q9P2E9 1410 aaKnown RBP8.87□□□□□ -0.99
TTC39C-201ENST00000304621 MTUS2Q5JR59 1369 aa8.86□□□□□ -0.99
TTC39C-201ENST00000304621 OSCARQ8IYS5 282 aa8.86□□□□□ -0.99
TTC39C-201ENST00000304621 ATP10BO94823 1461 aa8.85□□□□□ -0.99
TTC39C-201ENST00000304621 ARHGEF11O15085 1522 aa8.85□□□□□ -0.99
TTC39C-201ENST00000304621 NCOA2Q15596 1464 aa8.85□□□□□ -0.99
TTC39C-201ENST00000304621 DMRT2Q9Y5R5 561 aa8.85□□□□□ -0.99
TTC39C-201ENST00000304621 UACAQ9BZF9 1416 aa8.84□□□□□ -0.99
TTC39C-201ENST00000304621 SUPT6HQ7KZ85 1726 aaKnown RBP8.84□□□□□ -0.99
TTC39C-201ENST00000304621 CCNB3Q8WWL7 1395 aa8.83□□□□□ -1
TTC39C-201ENST00000304621 ABCC2Q92887 1545 aa8.83□□□□□ -1
TTC39C-201ENST00000304621 HNRNPUL2Q1KMD3 747 aaKnown RBP8.82□□□□□ -1
TTC39C-201ENST00000304621 NCBP3Q53F19 620 aaKnown RBP8.82□□□□□ -1
TTC39C-201ENST00000304621 KIF14Q15058 1648 aa8.82□□□□□ -1
TTC39C-201ENST00000304621 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.82□□□□□ -1
TTC39C-201ENST00000304621 CNKSR2Q8WXI2 1034 aa8.82□□□□□ -1
TTC39C-201ENST00000304621 TROQ12816 1431 aaPredicted RBP8.81□□□□□ -1
TTC39C-201ENST00000304621 ADCY10Q96PN6 1610 aa8.8□□□□□ -1
TTC39C-201ENST00000304621 MYOM3Q5VTT5 1437 aa8.8□□□□□ -1
TTC39C-201ENST00000304621 FGD6Q6ZV73 1430 aa8.8□□□□□ -1
TTC39C-201ENST00000304621 UHRF1BP1LA0JNW5 1464 aa8.8□□□□□ -1
TTC39C-201ENST00000304621 ZCCHC11Q5TAX3 1644 aaKnown RBP8.79□□□□□ -1
TTC39C-201ENST00000304621 PTPN23Q9H3S7 1636 aa8.77□□□□□ -1
TTC39C-201ENST00000304621 KDM5BQ9UGL1 1544 aa8.77□□□□□ -1.01
TTC39C-201ENST00000304621 ITGAEP38570 1179 aa8.77□□□□□ -1.01
TTC39C-201ENST00000304621 FAM50AQ14320 339 aaKnown RBP8.77□□□□□ -1.01
TTC39C-201ENST00000304621 ABCC10Q5T3U5 1492 aa8.76□□□□□ -1.01
TTC39C-201ENST00000304621 POTEDQ86YR6 584 aa8.76□□□□□ -1.01
TTC39C-201ENST00000304621 CDK11AQ9UQ88 783 aaPredicted RBP8.76□□□□□ -1.01
TTC39C-201ENST00000304621 PTPRKQ15262 1439 aa8.75□□□□□ -1.01
TTC39C-201ENST00000304621 PLEKHD1A6NEE1 506 aa8.75□□□□□ -1.01
TTC39C-201ENST00000304621 TCOF1Q13428 1488 aaKnown RBP8.75□□□□□ -1.01
TTC39C-201ENST00000304621 GPATCH8Q9UKJ3 1502 aaKnown RBP8.75□□□□□ -1.01
TTC39C-201ENST00000304621 HRCP23327 699 aa8.74□□□□□ -1.01
TTC39C-201ENST00000304621 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.74□□□□□ -1.01
TTC39C-201ENST00000304621 CDC42BPAQ5VT25 1732 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms