RNA–Protein interactions for RNA: ENST00000304621.10

TTC39C-201, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTC39C, Length 2,304 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-201ENST00000304621 NISCHQ9Y2I1 1504 aa13.31□□□□□ -0.28
TTC39C-201ENST00000304621 AEBP2Q6ZN18 517 aaPredicted RBP12.99□□□□□ -0.33
TTC39C-201ENST00000304621 CHIC1Q5VXU3 224 aa12.68□□□□□ -0.38
TTC39C-201ENST00000304621 CCDC180Q9P1Z9 1646 aa11.6□□□□□ -0.55
TTC39C-201ENST00000304621 ZCCHC6Q5VYS8 1495 aaKnown RBP11.18□□□□□ -0.62
TTC39C-201ENST00000304621 PHF23Q9BUL5 403 aaPredicted RBP11.1□□□□□ -0.63
TTC39C-201ENST00000304621 SENP3Q9H4L4 574 aaPredicted RBP11.1□□□□□ -0.63
TTC39C-201ENST00000304621 ABCC9O60706 1549 aa11.06□□□□□ -0.64
TTC39C-201ENST00000304621 DCAF8L2P0C7V8 631 aa10.98□□□□□ -0.65
TTC39C-201ENST00000304621 DCAF1Q9Y4B6 1507 aa10.97□□□□□ -0.65
TTC39C-201ENST00000304621 SHROOM4Q9ULL8 1493 aa10.86□□□□□ -0.67
TTC39C-201ENST00000304621 MYO15BQ96JP2 1530 aa10.84□□□□□ -0.67
TTC39C-201ENST00000304621 NACADO15069 1562 aa10.81□□□□□ -0.68
TTC39C-201ENST00000304621 RB1CC1Q8TDY2 1594 aa10.73□□□□□ -0.69
TTC39C-201ENST00000304621 SCRIBQ14160 1630 aa10.71□□□□□ -0.69
TTC39C-201ENST00000304621 UNC13AQ9UPW8 1703 aa10.58□□□□□ -0.72
TTC39C-201ENST00000304621 BICRAQ9NZM4 1560 aa10.48□□□□□ -0.73
TTC39C-201ENST00000304621 PABPN1Q86U42 306 aaKnown RBP eCLIP10.42□□□□□ -0.74
TTC39C-201ENST00000304621 SUPT5HO00267 1087 aaKnown RBP10.39□□□□□ -0.75
TTC39C-201ENST00000304621 CECR2Q9BXF3 1484 aa10.39□□□□□ -0.75
TTC39C-201ENST00000304621 RSF1Q96T23 1441 aaPredicted RBP10.32□□□□□ -0.76
TTC39C-201ENST00000304621 MROH2BQ7Z745 1585 aa10.31□□□□□ -0.76
TTC39C-201ENST00000304621 PLPPR3Q6T4P5 718 aa10.28□□□□□ -0.76
TTC39C-201ENST00000304621 FOXD1Q16676 465 aa10.27□□□□□ -0.77
TTC39C-201ENST00000304621 BAZ1AQ9NRL2 1556 aaPredicted RBP10.25□□□□□ -0.77
TTC39C-201ENST00000304621 SMARCA4P51532 1647 aa10.24□□□□□ -0.77
TTC39C-201ENST00000304621 WIZO95785 1651 aa10.23□□□□□ -0.77
TTC39C-201ENST00000304621 EIF4G1Q04637 1599 aaKnown RBP10.13□□□□□ -0.79
TTC39C-201ENST00000304621 PEG3Q9GZU2 1588 aa10.1□□□□□ -0.79
TTC39C-201ENST00000304621 TOP2AP11388 1531 aaKnown RBP10.09□□□□□ -0.79
TTC39C-201ENST00000304621 ATAD2BQ9ULI0 1458 aa10.08□□□□□ -0.8
TTC39C-201ENST00000304621 SMARCA2P51531 1590 aa10.04□□□□□ -0.8
TTC39C-201ENST00000304621 BAZ1BQ9UIG0 1483 aaKnown RBP10.01□□□□□ -0.81
TTC39C-201ENST00000304621 CC2D2AQ9P2K1 1620 aa10□□□□□ -0.81
TTC39C-201ENST00000304621 CCDC88BA6NC98 1476 aa10□□□□□ -0.81
TTC39C-201ENST00000304621 NCAPD3P42695 1498 aa9.98□□□□□ -0.81
TTC39C-201ENST00000304621 HMGXB3Q12766 1538 aa9.97□□□□□ -0.81
TTC39C-201ENST00000304621 DNAJC5BQ9UF47 199 aa9.84□□□□□ -0.83
TTC39C-201ENST00000304621 PPP6R1Q9UPN7 881 aa9.81□□□□□ -0.84
TTC39C-201ENST00000304621 ABCC8Q09428 1581 aa9.8□□□□□ -0.84
TTC39C-201ENST00000304621 ADRA2BP18089 450 aa9.79□□□□□ -0.84
TTC39C-201ENST00000304621 CFTRP13569 1480 aa9.76□□□□□ -0.85
TTC39C-201ENST00000304621 TRIM41Q8WV44 630 aa9.73□□□□□ -0.85
TTC39C-201ENST00000304621 CADPSQ9ULU8 1353 aa9.72□□□□□ -0.85
TTC39C-201ENST00000304621 NESP48681 1621 aa9.72□□□□□ -0.85
TTC39C-201ENST00000304621 PRDM2Q13029 1718 aa9.7□□□□□ -0.86
TTC39C-201ENST00000304621 SYNJ1O43426 1573 aa9.7□□□□□ -0.86
TTC39C-201ENST00000304621 WRNQ14191 1432 aaPredicted RBP eCLIP9.69□□□□□ -0.86
TTC39C-201ENST00000304621 PIAS4Q8N2W9 510 aaPredicted RBP9.66□□□□□ -0.86
TTC39C-201ENST00000304621 LAMC3Q9Y6N6 1575 aa9.65□□□□□ -0.87
TTC39C-201ENST00000304621 CUX1P39880 1505 aa9.64□□□□□ -0.87
TTC39C-201ENST00000304621 FANCD2Q9BXW9 1451 aa9.63□□□□□ -0.87
TTC39C-201ENST00000304621 TOP2BQ02880 1626 aa9.63□□□□□ -0.87
TTC39C-201ENST00000304621 BIVM-ERCC5R4GMW8 1640 aa9.63□□□□□ -0.87
TTC39C-201ENST00000304621 FAM9AQ8IZU1 332 aaPredicted RBP9.61□□□□□ -0.87
TTC39C-201ENST00000304621 SOGA1O94964 1423 aa9.6□□□□□ -0.87
TTC39C-201ENST00000304621 KIF21AQ7Z4S6 1674 aa9.59□□□□□ -0.87
TTC39C-201ENST00000304621 RUSC2Q8N2Y8 1516 aa9.59□□□□□ -0.87
TTC39C-201ENST00000304621 LOC105371045A0A1W2PR82 267 aa9.57□□□□□ -0.88
TTC39C-201ENST00000304621 CEP164Q9UPV0 1460 aa9.56□□□□□ -0.88
TTC39C-201ENST00000304621 MSH5O43196 834 aa9.55□□□□□ -0.88
TTC39C-201ENST00000304621 PDS5BQ9NTI5 1447 aa9.55□□□□□ -0.88
TTC39C-201ENST00000304621 URB2Q14146 1524 aaKnown RBP9.55□□□□□ -0.88
TTC39C-201ENST00000304621 DNMBPQ6XZF7 1577 aa9.54□□□□□ -0.88
TTC39C-201ENST00000304621 TOPBP1Q92547 1522 aa9.53□□□□□ -0.88
TTC39C-201ENST00000304621 FGD5Q6ZNL6 1462 aa9.52□□□□□ -0.88
TTC39C-201ENST00000304621 EHMT2Q96KQ7 1210 aa9.5□□□□□ -0.89
TTC39C-201ENST00000304621 POLA1P09884 1462 aaPredicted RBP9.48□□□□□ -0.89
TTC39C-201ENST00000304621 RAD54L2Q9Y4B4 1467 aa9.48□□□□□ -0.89
TTC39C-201ENST00000304621 EEA1Q15075 1411 aa9.47□□□□□ -0.89
TTC39C-201ENST00000304621 MRC2Q9UBG0 1479 aa9.47□□□□□ -0.89
TTC39C-201ENST00000304621 CSRNP3Q8WYN3 585 aa9.46□□□□□ -0.9
TTC39C-201ENST00000304621 THOC2Q8NI27 1593 aaKnown RBP9.44□□□□□ -0.9
TTC39C-201ENST00000304621 CUX2O14529 1486 aa9.44□□□□□ -0.9
TTC39C-201ENST00000304621 ERCC6Q03468 1493 aa9.44□□□□□ -0.9
TTC39C-201ENST00000304621 WDR97A6NE52 1622 aa9.43□□□□□ -0.9
TTC39C-201ENST00000304621 WDR62O43379 1518 aa9.43□□□□□ -0.9
TTC39C-201ENST00000304621 ABCA10Q8WWZ4 1543 aa9.42□□□□□ -0.9
TTC39C-201ENST00000304621 KIF27Q86VH2 1401 aa9.42□□□□□ -0.9
TTC39C-201ENST00000304621 TARBP1Q13395 1621 aaKnown RBP9.41□□□□□ -0.9
TTC39C-201ENST00000304621 KIF21BO75037 1637 aa9.41□□□□□ -0.9
TTC39C-201ENST00000304621 RAPGEF2Q9Y4G8 1499 aa9.39□□□□□ -0.91
TTC39C-201ENST00000304621 PRXQ9BXM0 1461 aa9.38□□□□□ -0.91
TTC39C-201ENST00000304621 IGF1RP08069 1367 aa9.38□□□□□ -0.91
TTC39C-201ENST00000304621 GOLGA3Q08378 1498 aa9.38□□□□□ -0.91
TTC39C-201ENST00000304621 ABCA5Q8WWZ7 1642 aa9.37□□□□□ -0.91
TTC39C-201ENST00000304621 TDRD9Q8NDG6 1382 aaKnown RBP9.37□□□□□ -0.91
TTC39C-201ENST00000304621 TNIKQ9UKE5 1360 aa9.34□□□□□ -0.91
TTC39C-201ENST00000304621 ZNF608Q9ULD9 1512 aaPredicted RBP9.34□□□□□ -0.91
TTC39C-201ENST00000304621 ERICH3Q5RHP9 1530 aa9.33□□□□□ -0.92
TTC39C-201ENST00000304621 GAPVD1Q14C86 1478 aa9.33□□□□□ -0.92
TTC39C-201ENST00000304621 AQRO60306 1485 aaKnown RBP eCLIP9.32□□□□□ -0.92
TTC39C-201ENST00000304621 IFT140Q96RY7 1462 aa9.32□□□□□ -0.92
TTC39C-201ENST00000304621 UBTFP17480 764 aaKnown RBP9.32□□□□□ -0.92
TTC39C-201ENST00000304621 CARMIL1Q5VZK9 1371 aa9.32□□□□□ -0.92
TTC39C-201ENST00000304621 CEP162Q5TB80 1403 aa9.31□□□□□ -0.92
TTC39C-201ENST00000304621 PBRM1Q86U86 1689 aa9.3□□□□□ -0.92
TTC39C-201ENST00000304621 CUL7Q14999 1698 aa9.29□□□□□ -0.92
TTC39C-201ENST00000304621 EIF4G3O43432 1585 aaKnown RBP9.29□□□□□ -0.92
TTC39C-201ENST00000304621 GRIN2BQ13224 1484 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms