RNA–Protein interactions for RNA: ENST00000304004.7

POLR1C-201, Transcript of RNA polymerase I and III subunit C, humanhuman

TSL 1 (best) BASIC

Gene POLR1C, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1C-201ENST00000304004 TRIM41Q8WV44 630 aa27.52■■■□□ 2
POLR1C-201ENST00000304004 CARMIL1Q5VZK9 1371 aa27.45■■□□□ 1.98
POLR1C-201ENST00000304004 ERCC6L2Q5T890 1561 aa27.43■■□□□ 1.98
POLR1C-201ENST00000304004 SENP3Q9H4L4 574 aaPredicted RBP27.4■■□□□ 1.98
POLR1C-201ENST00000304004 CTTNBP2Q8WZ74 1663 aa27.37■■□□□ 1.97
POLR1C-201ENST00000304004 KIAA0586Q9BVV6 1533 aa27.36■■□□□ 1.97
POLR1C-201ENST00000304004 RAPGEF2Q9Y4G8 1499 aa27.35■■□□□ 1.97
POLR1C-201ENST00000304004 IQGAP2Q13576 1575 aa27.31■■□□□ 1.96
POLR1C-201ENST00000304004 CYB5RLQ6IPT4 315 aa27.3■■□□□ 1.96
POLR1C-201ENST00000304004 PRG4Q92954 1404 aaPredicted RBP27.27■■□□□ 1.96
POLR1C-201ENST00000304004 PRXQ9BXM0 1461 aa27.25■■□□□ 1.95
POLR1C-201ENST00000304004 EEA1Q15075 1411 aa27.24■■□□□ 1.95
POLR1C-201ENST00000304004 JPH4Q96JJ6 628 aa27.21■■□□□ 1.95
POLR1C-201ENST00000304004 UGGT2Q9NYU1 1516 aa27.12■■□□□ 1.93
POLR1C-201ENST00000304004 KIF21BO75037 1637 aa27.09■■□□□ 1.93
POLR1C-201ENST00000304004 KIAA0556O60303 1618 aa27.06■■□□□ 1.92
POLR1C-201ENST00000304004 CSRNP3Q8WYN3 585 aa27.06■■□□□ 1.92
POLR1C-201ENST00000304004 CARMIL2Q6F5E8 1435 aa27.05■■□□□ 1.92
POLR1C-201ENST00000304004 DISP1Q96F81 1524 aa27.04■■□□□ 1.92
POLR1C-201ENST00000304004 ADCY10Q96PN6 1610 aa27.03■■□□□ 1.92
POLR1C-201ENST00000304004 TNIKQ9UKE5 1360 aa26.94■■□□□ 1.9
POLR1C-201ENST00000304004 FAM9AQ8IZU1 332 aaPredicted RBP26.93■■□□□ 1.9
POLR1C-201ENST00000304004 GOLGA3Q08378 1498 aa26.93■■□□□ 1.9
POLR1C-201ENST00000304004 PTPRGP23470 1445 aa26.9■■□□□ 1.9
POLR1C-201ENST00000304004 SAMD9Q5K651 1589 aa26.88■■□□□ 1.89
POLR1C-201ENST00000304004 KIF13AQ9H1H9 1805 aa26.88■■□□□ 1.89
POLR1C-201ENST00000304004 MAPKBP1O60336 1514 aa26.84■■□□□ 1.89
POLR1C-201ENST00000304004 ABCC2Q92887 1545 aa26.82■■□□□ 1.88
POLR1C-201ENST00000304004 UHRF1BP1LA0JNW5 1464 aa26.81■■□□□ 1.88
POLR1C-201ENST00000304004 UACAQ9BZF9 1416 aa26.76■■□□□ 1.87
POLR1C-201ENST00000304004 TTBK1Q5TCY1 1321 aaPredicted RBP26.76■■□□□ 1.87
POLR1C-201ENST00000304004 TRHP20396 242 aaPredicted RBP26.76■■□□□ 1.87
POLR1C-201ENST00000304004 ZCCHC11Q5TAX3 1644 aaKnown RBP26.75■■□□□ 1.87
POLR1C-201ENST00000304004 ABCA8O94911 1581 aa26.74■■□□□ 1.87
POLR1C-201ENST00000304004 EFCAB5A4FU69 1503 aa26.73■■□□□ 1.87
POLR1C-201ENST00000304004 DIP2BQ9P265 1576 aa26.71■■□□□ 1.87
POLR1C-201ENST00000304004 PLB1Q6P1J6 1458 aa26.68■■□□□ 1.86
POLR1C-201ENST00000304004 NPM1P06748 294 aaKnown RBP eCLIP26.68■■□□□ 1.86
POLR1C-201ENST00000304004 KDM5BQ9UGL1 1544 aa26.67■■□□□ 1.86
POLR1C-201ENST00000304004 ABCC10Q5T3U5 1492 aa26.63■■□□□ 1.85
POLR1C-201ENST00000304004 RAPGEF6Q8TEU7 1601 aa26.63■■□□□ 1.85
POLR1C-201ENST00000304004 TSPOAP1O95153 1857 aa26.58■■□□□ 1.85
POLR1C-201ENST00000304004 FHOD3Q2V2M9 1422 aa26.57■■□□□ 1.84
POLR1C-201ENST00000304004 UBTFP17480 764 aaKnown RBP26.57■■□□□ 1.84
POLR1C-201ENST00000304004 EHMT2Q96KQ7 1210 aa26.57■■□□□ 1.84
POLR1C-201ENST00000304004 ASXL2Q76L83 1435 aa26.56■■□□□ 1.84
POLR1C-201ENST00000304004 P3H3Q8IVL6 736 aa26.55■■□□□ 1.84
POLR1C-201ENST00000304004 RANGAP1P46060 587 aaPredicted RBP26.52■■□□□ 1.84
POLR1C-201ENST00000304004 GLI2P10070 1586 aa26.51■■□□□ 1.83
POLR1C-201ENST00000304004 ARHGAP35Q9NRY4 1499 aa26.49■■□□□ 1.83
POLR1C-201ENST00000304004 WDR7Q9Y4E6 1490 aa26.47■■□□□ 1.83
POLR1C-201ENST00000304004 PPRC1Q5VV67 1664 aaKnown RBP26.46■■□□□ 1.83
POLR1C-201ENST00000304004 MAP3K4Q9Y6R4 1608 aa26.46■■□□□ 1.83
POLR1C-201ENST00000304004 FAM69CQ0P6D2 419 aa26.44■■□□□ 1.82
POLR1C-201ENST00000304004 EPRSP07814 1512 aaKnown RBP26.44■■□□□ 1.82
POLR1C-201ENST00000304004 NUP153P49790 1475 aaKnown RBP26.43■■□□□ 1.82
POLR1C-201ENST00000304004 CFAP43Q8NDM7 1665 aa26.41■■□□□ 1.82
POLR1C-201ENST00000304004 ATP10BO94823 1461 aa26.4■■□□□ 1.82
POLR1C-201ENST00000304004 HECW1Q76N89 1606 aa26.39■■□□□ 1.82
POLR1C-201ENST00000304004 FMN1Q68DA7 1419 aa26.37■■□□□ 1.81
POLR1C-201ENST00000304004 LRRIQ1Q96JM4 1722 aa26.36■■□□□ 1.81
POLR1C-201ENST00000304004 PCF11O94913 1555 aaKnown RBP26.3■■□□□ 1.8
POLR1C-201ENST00000304004 KDM6BO15054 1643 aa26.29■■□□□ 1.8
POLR1C-201ENST00000304004 ABCA9Q8IUA7 1624 aa26.29■■□□□ 1.8
POLR1C-201ENST00000304004 ARID3CA6NKF2 412 aa26.29■■□□□ 1.8
POLR1C-201ENST00000304004 CLIP1P30622 1438 aa26.28■■□□□ 1.8
POLR1C-201ENST00000304004 CDK13Q14004 1512 aaKnown RBP26.27■■□□□ 1.8
POLR1C-201ENST00000304004 TEX14Q8IWB6 1497 aa26.23■■□□□ 1.79
POLR1C-201ENST00000304004 MAGI3Q5TCQ9 1506 aa26.18■■□□□ 1.78
POLR1C-201ENST00000304004 FYCO1Q9BQS8 1478 aa26.17■■□□□ 1.78
POLR1C-201ENST00000304004 CEP162Q5TB80 1403 aa26.17■■□□□ 1.78
POLR1C-201ENST00000304004 CASKIN1Q8WXD9 1431 aa26.16■■□□□ 1.78
POLR1C-201ENST00000304004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.16■■□□□ 1.78
POLR1C-201ENST00000304004 HNRNPUL2Q1KMD3 747 aaKnown RBP26.16■■□□□ 1.78
POLR1C-201ENST00000304004 CD109Q6YHK3 1445 aa26.15■■□□□ 1.78
POLR1C-201ENST00000304004 KCNH8Q96L42 1107 aa26.15■■□□□ 1.78
POLR1C-201ENST00000304004 TTC37Q6PGP7 1564 aa26.13■■□□□ 1.77
POLR1C-201ENST00000304004 CCDC18Q5T9S5 1454 aa26.13■■□□□ 1.77
POLR1C-201ENST00000304004 MYO5CQ9NQX4 1742 aa26.09■■□□□ 1.77
POLR1C-201ENST00000304004 KIF14Q15058 1648 aa26.09■■□□□ 1.77
POLR1C-201ENST00000304004 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.09■■□□□ 1.77
POLR1C-201ENST00000304004 CFAP74Q9C0B2 1584 aa26.07■■□□□ 1.76
POLR1C-201ENST00000304004 PLEKHD1A6NEE1 506 aa26.06■■□□□ 1.76
POLR1C-201ENST00000304004 ATP1B4Q9UN42 357 aaPredicted RBP26.06■■□□□ 1.76
POLR1C-201ENST00000304004 TROQ12816 1431 aaPredicted RBP26■■□□□ 1.75
POLR1C-201ENST00000304004 LOC105371045A0A1W2PR82 267 aa26■■□□□ 1.75
POLR1C-201ENST00000304004 COL17A1Q9UMD9 1497 aaPredicted RBP25.99■■□□□ 1.75
POLR1C-201ENST00000304004 NEO1Q92859 1461 aa25.98■■□□□ 1.75
POLR1C-201ENST00000304004 CDK11AQ9UQ88 783 aaPredicted RBP25.96■■□□□ 1.75
POLR1C-201ENST00000304004 ARAP3Q8WWN8 1544 aa25.95■■□□□ 1.74
POLR1C-201ENST00000304004 CDC42BPAQ5VT25 1732 aa25.93■■□□□ 1.74
POLR1C-201ENST00000304004 PREX2Q70Z35 1606 aa25.92■■□□□ 1.74
POLR1C-201ENST00000304004 CDC42BPBQ9Y5S2 1711 aa25.92■■□□□ 1.74
POLR1C-201ENST00000304004 RICTORQ6R327 1708 aa25.91■■□□□ 1.74
POLR1C-201ENST00000304004 PHLDB1Q86UU1 1377 aa25.91■■□□□ 1.74
POLR1C-201ENST00000304004 FANCAO15360 1455 aa25.9■■□□□ 1.74
POLR1C-201ENST00000304004 FRMPD1Q5SYB0 1578 aa25.9■■□□□ 1.74
POLR1C-201ENST00000304004 VPS8Q8N3P4 1428 aa25.87■■□□□ 1.73
POLR1C-201ENST00000304004 EHBP1L1Q8N3D4 1523 aa25.84■■□□□ 1.73
POLR1C-201ENST00000304004 PLCH2O75038 1416 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms