RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 PBRM1Q86U86 1689 aa22.25■■□□□ 1.15
SHCBP1-201ENST00000303383 ZNF608Q9ULD9 1512 aaPredicted RBP22.24■■□□□ 1.15
SHCBP1-201ENST00000303383 FHAD1B1AJZ9 1412 aa22.22■■□□□ 1.15
SHCBP1-201ENST00000303383 CTTNBP2Q8WZ74 1663 aa22.2■■□□□ 1.14
SHCBP1-201ENST00000303383 ATP1B4Q9UN42 357 aaPredicted RBP22.18■■□□□ 1.14
SHCBP1-201ENST00000303383 ADAMTS12P58397 1594 aa22.14■■□□□ 1.13
SHCBP1-201ENST00000303383 EIF4G3O43432 1585 aaKnown RBP22.13■■□□□ 1.13
SHCBP1-201ENST00000303383 EFCAB5A4FU69 1503 aa22.13■■□□□ 1.13
SHCBP1-201ENST00000303383 FHOD3Q2V2M9 1422 aa22.11■■□□□ 1.13
SHCBP1-201ENST00000303383 SNAPC4Q5SXM2 1469 aa22.11■■□□□ 1.13
SHCBP1-201ENST00000303383 FBLN2P98095 1184 aa22.1■■□□□ 1.13
SHCBP1-201ENST00000303383 CHMP7Q8WUX9 453 aaPredicted RBP22.08■■□□□ 1.13
SHCBP1-201ENST00000303383 KANK4Q5T7N3 995 aaPredicted RBP22.05■■□□□ 1.12
SHCBP1-201ENST00000303383 FMN1Q68DA7 1419 aa22.02■■□□□ 1.12
SHCBP1-201ENST00000303383 MAGI1Q96QZ7 1491 aaPredicted RBP22.02■■□□□ 1.12
SHCBP1-201ENST00000303383 IQGAP2Q13576 1575 aa21.99■■□□□ 1.11
SHCBP1-201ENST00000303383 GRIN2AQ12879 1464 aa21.98■■□□□ 1.11
SHCBP1-201ENST00000303383 HNRNPUL2Q1KMD3 747 aaKnown RBP21.97■■□□□ 1.11
SHCBP1-201ENST00000303383 ZEB1P37275 1124 aaPredicted RBP21.96■■□□□ 1.11
SHCBP1-201ENST00000303383 PCF11O94913 1555 aaKnown RBP21.96■■□□□ 1.11
SHCBP1-201ENST00000303383 SYNJ2O15056 1496 aa21.95■■□□□ 1.1
SHCBP1-201ENST00000303383 SAMD9Q5K651 1589 aa21.93■■□□□ 1.1
SHCBP1-201ENST00000303383 FYCO1Q9BQS8 1478 aa21.93■■□□□ 1.1
SHCBP1-201ENST00000303383 CASKIN1Q8WXD9 1431 aa21.93■■□□□ 1.1
SHCBP1-201ENST00000303383 TIAM1Q13009 1591 aa21.93■■□□□ 1.1
SHCBP1-201ENST00000303383 CCER1Q8TC90 406 aaPredicted RBP21.93■■□□□ 1.1
SHCBP1-201ENST00000303383 KIAA0586Q9BVV6 1533 aa21.91■■□□□ 1.1
SHCBP1-201ENST00000303383 MAP3K1Q13233 1512 aa21.91■■□□□ 1.1
SHCBP1-201ENST00000303383 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.91■■□□□ 1.1
SHCBP1-201ENST00000303383 LRRC9Q6ZRR7 1453 aa21.86■■□□□ 1.09
SHCBP1-201ENST00000303383 UGGT2Q9NYU1 1516 aa21.83■■□□□ 1.08
SHCBP1-201ENST00000303383 CFAP43Q8NDM7 1665 aa21.81■■□□□ 1.08
SHCBP1-201ENST00000303383 MTUS2Q5JR59 1369 aa21.81■■□□□ 1.08
SHCBP1-201ENST00000303383 CCNB3Q8WWL7 1395 aa21.78■■□□□ 1.08
SHCBP1-201ENST00000303383 CEP170Q5SW79 1584 aa21.78■■□□□ 1.08
SHCBP1-201ENST00000303383 ITGAEP38570 1179 aa21.77■■□□□ 1.08
SHCBP1-201ENST00000303383 JPH4Q96JJ6 628 aa21.76■■□□□ 1.07
SHCBP1-201ENST00000303383 RRBP1Q9P2E9 1410 aaKnown RBP21.75■■□□□ 1.07
SHCBP1-201ENST00000303383 NUP160Q12769 1436 aa21.75■■□□□ 1.07
SHCBP1-201ENST00000303383 CARMIL2Q6F5E8 1435 aa21.75■■□□□ 1.07
SHCBP1-201ENST00000303383 ARID3CA6NKF2 412 aa21.74■■□□□ 1.07
SHCBP1-201ENST00000303383 KIAA0556O60303 1618 aa21.73■■□□□ 1.07
SHCBP1-201ENST00000303383 FAM50AQ14320 339 aaKnown RBP21.73■■□□□ 1.07
SHCBP1-201ENST00000303383 HECW1Q76N89 1606 aa21.71■■□□□ 1.07
SHCBP1-201ENST00000303383 DISP1Q96F81 1524 aa21.71■■□□□ 1.07
SHCBP1-201ENST00000303383 CCDC18Q5T9S5 1454 aa21.71■■□□□ 1.07
SHCBP1-201ENST00000303383 PHLDB1Q86UU1 1377 aa21.69■■□□□ 1.06
SHCBP1-201ENST00000303383 EPRSP07814 1512 aaKnown RBP21.63■■□□□ 1.05
SHCBP1-201ENST00000303383 CHD1O14646 1710 aa21.62■■□□□ 1.05
SHCBP1-201ENST00000303383 CDK11AQ9UQ88 783 aaPredicted RBP21.61■■□□□ 1.05
SHCBP1-201ENST00000303383 EHBP1L1Q8N3D4 1523 aa21.61■■□□□ 1.05
SHCBP1-201ENST00000303383 LRRIQ1Q96JM4 1722 aa21.61■■□□□ 1.05
SHCBP1-201ENST00000303383 CDK13Q14004 1512 aaKnown RBP21.59■■□□□ 1.05
SHCBP1-201ENST00000303383 SUPT6HQ7KZ85 1726 aaKnown RBP21.57■■□□□ 1.04
SHCBP1-201ENST00000303383 RAPGEF6Q8TEU7 1601 aa21.57■■□□□ 1.04
SHCBP1-201ENST00000303383 NCOA2Q15596 1464 aa21.57■■□□□ 1.04
SHCBP1-201ENST00000303383 PRG4Q92954 1404 aaPredicted RBP21.57■■□□□ 1.04
SHCBP1-201ENST00000303383 FGD6Q6ZV73 1430 aa21.53■■□□□ 1.04
SHCBP1-201ENST00000303383 PLB1Q6P1J6 1458 aa21.52■■□□□ 1.04
SHCBP1-201ENST00000303383 NUP153P49790 1475 aaKnown RBP21.52■■□□□ 1.03
SHCBP1-201ENST00000303383 MYOM3Q5VTT5 1437 aa21.51■■□□□ 1.03
SHCBP1-201ENST00000303383 PTPRGP23470 1445 aa21.49■■□□□ 1.03
SHCBP1-201ENST00000303383 MAGI3Q5TCQ9 1506 aa21.49■■□□□ 1.03
SHCBP1-201ENST00000303383 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.46■■□□□ 1.03
SHCBP1-201ENST00000303383 PLEKHD1A6NEE1 506 aa21.42■■□□□ 1.02
SHCBP1-201ENST00000303383 SETD5Q9C0A6 1442 aa21.41■■□□□ 1.02
SHCBP1-201ENST00000303383 RAB3GAP2Q9H2M9 1393 aa21.4■■□□□ 1.02
SHCBP1-201ENST00000303383 TROQ12816 1431 aaPredicted RBP21.38■■□□□ 1.01
SHCBP1-201ENST00000303383 ARHGEF11O15085 1522 aa21.37■■□□□ 1.01
SHCBP1-201ENST00000303383 PTPN23Q9H3S7 1636 aa21.37■■□□□ 1.01
SHCBP1-201ENST00000303383 ABCA8O94911 1581 aa21.37■■□□□ 1.01
SHCBP1-201ENST00000303383 DHX57Q6P158 1386 aaKnown RBP21.36■■□□□ 1.01
SHCBP1-201ENST00000303383 SHROOM2Q13796 1616 aa21.35■■□□□ 1.01
SHCBP1-201ENST00000303383 MIA2Q96PC5 1412 aa21.34■■□□□ 1.01
SHCBP1-201ENST00000303383 CLSPNQ9HAW4 1339 aa21.34■■□□□ 1.01
SHCBP1-201ENST00000303383 UACAQ9BZF9 1416 aa21.32■■□□□ 1
SHCBP1-201ENST00000303383 ATP10BO94823 1461 aa21.31■■□□□ 1
SHCBP1-201ENST00000303383 CFDP1Q9UEE9 299 aaPredicted RBP21.31■■□□□ 1
SHCBP1-201ENST00000303383 CHIC2Q9UKJ5 165 aa21.3■■□□□ 1
SHCBP1-201ENST00000303383 CLASP1Q7Z460 1538 aa21.3■■□□□ 1
SHCBP1-201ENST00000303383 ZNF777Q9ULD5 760 aaPredicted RBP21.29■■□□□ 1
SHCBP1-201ENST00000303383 ERCC6L2Q5T890 1561 aa21.28■■□□□ 1
SHCBP1-201ENST00000303383 TCOF1Q13428 1488 aaKnown RBP21.27■■□□□ 1
SHCBP1-201ENST00000303383 OSCARQ8IYS5 282 aa21.24■□□□□ 0.99
SHCBP1-201ENST00000303383 RRP7BPQ9NSQ0 103 aa21.24■□□□□ 0.99
SHCBP1-201ENST00000303383 PTPRKQ15262 1439 aa21.24■□□□□ 0.99
SHCBP1-201ENST00000303383 KIF14Q15058 1648 aa21.23■□□□□ 0.99
SHCBP1-201ENST00000303383 ZNF644Q9H582 1327 aaPredicted RBP21.21■□□□□ 0.99
SHCBP1-201ENST00000303383 HFM1A2PYH4 1435 aa21.21■□□□□ 0.99
SHCBP1-201ENST00000303383 ITSN2Q9NZM3 1697 aa21.2■□□□□ 0.98
SHCBP1-201ENST00000303383 ABCC2Q92887 1545 aa21.19■□□□□ 0.98
SHCBP1-201ENST00000303383 ADCY10Q96PN6 1610 aa21.19■□□□□ 0.98
SHCBP1-201ENST00000303383 GPATCH8Q9UKJ3 1502 aaKnown RBP21.18■□□□□ 0.98
SHCBP1-201ENST00000303383 NAIPQ13075 1403 aa21.15■□□□□ 0.98
SHCBP1-201ENST00000303383 KCNH8Q96L42 1107 aa21.15■□□□□ 0.98
SHCBP1-201ENST00000303383 DAPK1P53355 1430 aa21.14■□□□□ 0.97
SHCBP1-201ENST00000303383 TRIM52Q96A61 297 aa21.14■□□□□ 0.97
SHCBP1-201ENST00000303383 CAMSAP2Q08AD1 1489 aa21.14■□□□□ 0.97
SHCBP1-201ENST00000303383 NEUROD1Q13562 356 aa21.1■□□□□ 0.97
SHCBP1-201ENST00000303383 ABCC5O15440 1437 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms