RNA–Protein interactions for RNA: ENST00000278460.11

C11orf49-201, Transcript of chromosome 11 open reading frame 49, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C11orf49, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-201ENST00000278460 SNAPC4Q5SXM2 1469 aa30.51■■■□□ 2.47
C11orf49-201ENST00000278460 MAGI1Q96QZ7 1491 aaPredicted RBP30.49■■■□□ 2.47
C11orf49-201ENST00000278460 EFCAB5A4FU69 1503 aa30.48■■■□□ 2.47
C11orf49-201ENST00000278460 PCGF6Q9BYE7 350 aa30.44■■■□□ 2.46
C11orf49-201ENST00000278460 GRIN2AQ12879 1464 aa30.36■■■□□ 2.45
C11orf49-201ENST00000278460 SAMD9Q5K651 1589 aa30.36■■■□□ 2.45
C11orf49-201ENST00000278460 SYNJ2O15056 1496 aa30.35■■■□□ 2.45
C11orf49-201ENST00000278460 IQGAP2Q13576 1575 aa30.34■■■□□ 2.45
C11orf49-201ENST00000278460 PPARGC1BQ86YN6 1023 aaKnown RBP30.33■■■□□ 2.45
C11orf49-201ENST00000278460 APLP2Q06481 763 aa30.25■■■□□ 2.43
C11orf49-201ENST00000278460 KIAA0586Q9BVV6 1533 aa30.23■■■□□ 2.43
C11orf49-201ENST00000278460 FHOD3Q2V2M9 1422 aa30.22■■■□□ 2.43
C11orf49-201ENST00000278460 UGGT2Q9NYU1 1516 aa30.2■■■□□ 2.43
C11orf49-201ENST00000278460 CHMP7Q8WUX9 453 aaPredicted RBP30.19■■■□□ 2.42
C11orf49-201ENST00000278460 CEP170Q5SW79 1584 aa30.19■■■□□ 2.42
C11orf49-201ENST00000278460 PCF11O94913 1555 aaKnown RBP30.18■■■□□ 2.42
C11orf49-201ENST00000278460 MAP3K1Q13233 1512 aa30.16■■■□□ 2.42
C11orf49-201ENST00000278460 P3H3Q8IVL6 736 aa30.16■■■□□ 2.42
C11orf49-201ENST00000278460 FMN1Q68DA7 1419 aa30.14■■■□□ 2.42
C11orf49-201ENST00000278460 NUP160Q12769 1436 aa30.14■■■□□ 2.42
C11orf49-201ENST00000278460 FYCO1Q9BQS8 1478 aa30.12■■■□□ 2.41
C11orf49-201ENST00000278460 CHD1O14646 1710 aa30.11■■■□□ 2.41
C11orf49-201ENST00000278460 CFAP43Q8NDM7 1665 aa30.11■■■□□ 2.41
C11orf49-201ENST00000278460 TIAM1Q13009 1591 aa30.1■■■□□ 2.41
C11orf49-201ENST00000278460 CASKIN1Q8WXD9 1431 aa30.09■■■□□ 2.41
C11orf49-201ENST00000278460 TTBK1Q5TCY1 1321 aaPredicted RBP30.07■■■□□ 2.4
C11orf49-201ENST00000278460 FBLN2P98095 1184 aa30.05■■■□□ 2.4
C11orf49-201ENST00000278460 KIAA0556O60303 1618 aa30.04■■■□□ 2.4
C11orf49-201ENST00000278460 DISP1Q96F81 1524 aa30■■■□□ 2.39
C11orf49-201ENST00000278460 LRRIQ1Q96JM4 1722 aa29.97■■■□□ 2.39
C11orf49-201ENST00000278460 KANK4Q5T7N3 995 aaPredicted RBP29.96■■■□□ 2.39
C11orf49-201ENST00000278460 LRRC9Q6ZRR7 1453 aa29.91■■■□□ 2.38
C11orf49-201ENST00000278460 HECW1Q76N89 1606 aa29.89■■■□□ 2.38
C11orf49-201ENST00000278460 JPH4Q96JJ6 628 aa29.84■■■□□ 2.37
C11orf49-201ENST00000278460 ATP1B4Q9UN42 357 aaPredicted RBP29.84■■■□□ 2.37
C11orf49-201ENST00000278460 CARMIL2Q6F5E8 1435 aa29.84■■■□□ 2.37
C11orf49-201ENST00000278460 CCDC18Q5T9S5 1454 aa29.81■■■□□ 2.36
C11orf49-201ENST00000278460 SHROOM2Q13796 1616 aa29.8■■■□□ 2.36
C11orf49-201ENST00000278460 RAPGEF6Q8TEU7 1601 aa29.77■■■□□ 2.36
C11orf49-201ENST00000278460 RRBP1Q9P2E9 1410 aaKnown RBP29.74■■■□□ 2.35
C11orf49-201ENST00000278460 EPRSP07814 1512 aaKnown RBP29.71■■■□□ 2.35
C11orf49-201ENST00000278460 CLASP1Q7Z460 1538 aa29.7■■■□□ 2.35
C11orf49-201ENST00000278460 EHBP1L1Q8N3D4 1523 aa29.68■■■□□ 2.34
C11orf49-201ENST00000278460 PRG4Q92954 1404 aaPredicted RBP29.67■■■□□ 2.34
C11orf49-201ENST00000278460 HRCP23327 699 aa29.67■■■□□ 2.34
C11orf49-201ENST00000278460 SUPT6HQ7KZ85 1726 aaKnown RBP29.65■■■□□ 2.34
C11orf49-201ENST00000278460 MTUS2Q5JR59 1369 aa29.64■■■□□ 2.34
C11orf49-201ENST00000278460 NUP153P49790 1475 aaKnown RBP29.62■■■□□ 2.33
C11orf49-201ENST00000278460 CDK13Q14004 1512 aaKnown RBP29.62■■■□□ 2.33
C11orf49-201ENST00000278460 MAGI3Q5TCQ9 1506 aa29.6■■■□□ 2.33
C11orf49-201ENST00000278460 ABCA8O94911 1581 aa29.6■■■□□ 2.33
C11orf49-201ENST00000278460 CCNB3Q8WWL7 1395 aa29.6■■■□□ 2.33
C11orf49-201ENST00000278460 PHLDB1Q86UU1 1377 aa29.59■■■□□ 2.33
C11orf49-201ENST00000278460 PLB1Q6P1J6 1458 aa29.58■■■□□ 2.33
C11orf49-201ENST00000278460 ARHGEF11O15085 1522 aa29.53■■■□□ 2.32
C11orf49-201ENST00000278460 NCOA2Q15596 1464 aa29.52■■■□□ 2.32
C11orf49-201ENST00000278460 PTPRGP23470 1445 aa29.49■■■□□ 2.31
C11orf49-201ENST00000278460 HNRNPUL2Q1KMD3 747 aaKnown RBP29.49■■■□□ 2.31
C11orf49-201ENST00000278460 ERCC6L2Q5T890 1561 aa29.48■■■□□ 2.31
C11orf49-201ENST00000278460 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.43■■■□□ 2.3
C11orf49-201ENST00000278460 FGD6Q6ZV73 1430 aa29.42■■■□□ 2.3
C11orf49-201ENST00000278460 MYOM3Q5VTT5 1437 aa29.41■■■□□ 2.3
C11orf49-201ENST00000278460 CDK11AQ9UQ88 783 aaPredicted RBP29.4■■■□□ 2.3
C11orf49-201ENST00000278460 ARID3CA6NKF2 412 aa29.39■■■□□ 2.3
C11orf49-201ENST00000278460 ADCY10Q96PN6 1610 aa29.39■■■□□ 2.3
C11orf49-201ENST00000278460 ATP10BO94823 1461 aa29.35■■■□□ 2.29
C11orf49-201ENST00000278460 TROQ12816 1431 aaPredicted RBP29.35■■■□□ 2.29
C11orf49-201ENST00000278460 UACAQ9BZF9 1416 aa29.35■■■□□ 2.29
C11orf49-201ENST00000278460 ZEB1P37275 1124 aaPredicted RBP29.34■■■□□ 2.29
C11orf49-201ENST00000278460 PTPN23Q9H3S7 1636 aa29.32■■■□□ 2.28
C11orf49-201ENST00000278460 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.31■■■□□ 2.28
C11orf49-201ENST00000278460 ABCC2Q92887 1545 aa29.3■■■□□ 2.28
C11orf49-201ENST00000278460 FAM50AQ14320 339 aaKnown RBP29.29■■■□□ 2.28
C11orf49-201ENST00000278460 MIA2Q96PC5 1412 aa29.27■■■□□ 2.28
C11orf49-201ENST00000278460 OSCARQ8IYS5 282 aa29.27■■■□□ 2.28
C11orf49-201ENST00000278460 TCOF1Q13428 1488 aaKnown RBP29.26■■■□□ 2.27
C11orf49-201ENST00000278460 CCER1Q8TC90 406 aaPredicted RBP29.26■■■□□ 2.27
C11orf49-201ENST00000278460 ITSN2Q9NZM3 1697 aa29.25■■■□□ 2.27
C11orf49-201ENST00000278460 KIF14Q15058 1648 aa29.24■■■□□ 2.27
C11orf49-201ENST00000278460 UHRF1BP1LA0JNW5 1464 aa29.24■■■□□ 2.27
C11orf49-201ENST00000278460 ITGAEP38570 1179 aa29.2■■■□□ 2.27
C11orf49-201ENST00000278460 PLEKHD1A6NEE1 506 aa29.19■■■□□ 2.26
C11orf49-201ENST00000278460 ZCCHC11Q5TAX3 1644 aaKnown RBP29.14■■■□□ 2.26
C11orf49-201ENST00000278460 CDC42BPAQ5VT25 1732 aa29.14■■■□□ 2.26
C11orf49-201ENST00000278460 ABCC10Q5T3U5 1492 aa29.11■■■□□ 2.25
C11orf49-201ENST00000278460 KDM5BQ9UGL1 1544 aa29.11■■■□□ 2.25
C11orf49-201ENST00000278460 GPATCH8Q9UKJ3 1502 aaKnown RBP29.09■■■□□ 2.25
C11orf49-201ENST00000278460 SETD5Q9C0A6 1442 aa29.08■■■□□ 2.25
C11orf49-201ENST00000278460 PTPRKQ15262 1439 aa29.05■■■□□ 2.24
C11orf49-201ENST00000278460 DNMT1P26358 1616 aaKnown RBP29.03■■■□□ 2.24
C11orf49-201ENST00000278460 RAB3GAP2Q9H2M9 1393 aa29.03■■■□□ 2.24
C11orf49-201ENST00000278460 PREX2Q70Z35 1606 aa28.99■■■□□ 2.23
C11orf49-201ENST00000278460 CAMSAP2Q08AD1 1489 aa28.98■■■□□ 2.23
C11orf49-201ENST00000278460 DHX57Q6P158 1386 aaKnown RBP28.98■■■□□ 2.23
C11orf49-201ENST00000278460 GCC2Q8IWJ2 1684 aa28.98■■■□□ 2.23
C11orf49-201ENST00000278460 CDC42BPBQ9Y5S2 1711 aa28.97■■■□□ 2.23
C11orf49-201ENST00000278460 HFM1A2PYH4 1435 aa28.97■■■□□ 2.23
C11orf49-201ENST00000278460 CFDP1Q9UEE9 299 aaPredicted RBP28.97■■■□□ 2.23
C11orf49-201ENST00000278460 MYO5CQ9NQX4 1742 aa28.95■■■□□ 2.23
C11orf49-201ENST00000278460 AKNAQ7Z591 1439 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms