RNA–Protein interactions for RNA: ENST00000278460.11

C11orf49-201, Transcript of chromosome 11 open reading frame 49, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C11orf49, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-201ENST00000278460 NISCHQ9Y2I1 1504 aa44.23■■■■■ 4.67
C11orf49-201ENST00000278460 CCDC180Q9P1Z9 1646 aa38.69■■■■□ 3.78
C11orf49-201ENST00000278460 ZCCHC6Q5VYS8 1495 aaKnown RBP37.17■■■■□ 3.54
C11orf49-201ENST00000278460 DCAF1Q9Y4B6 1507 aa36.64■■■■□ 3.46
C11orf49-201ENST00000278460 ABCC9O60706 1549 aa36.34■■■■□ 3.41
C11orf49-201ENST00000278460 DCAF8L2P0C7V8 631 aa36.31■■■■□ 3.4
C11orf49-201ENST00000278460 MYO15BQ96JP2 1530 aa36.2■■■■□ 3.39
C11orf49-201ENST00000278460 SHROOM4Q9ULL8 1493 aa35.95■■■■□ 3.34
C11orf49-201ENST00000278460 NACADO15069 1562 aa35.94■■■■□ 3.34
C11orf49-201ENST00000278460 RB1CC1Q8TDY2 1594 aa35.62■■■■□ 3.29
C11orf49-201ENST00000278460 SCRIBQ14160 1630 aa35.45■■■■□ 3.27
C11orf49-201ENST00000278460 UNC13AQ9UPW8 1703 aa35.04■■■■□ 3.2
C11orf49-201ENST00000278460 SUPT5HO00267 1087 aaKnown RBP34.6■■■■□ 3.13
C11orf49-201ENST00000278460 BICRAQ9NZM4 1560 aa34.55■■■■□ 3.12
C11orf49-201ENST00000278460 CECR2Q9BXF3 1484 aa34.3■■■■□ 3.08
C11orf49-201ENST00000278460 RSF1Q96T23 1441 aaPredicted RBP34.28■■■■□ 3.08
C11orf49-201ENST00000278460 PABPN1Q86U42 306 aaKnown RBP eCLIP34.2■■■■□ 3.07
C11orf49-201ENST00000278460 BAZ1AQ9NRL2 1556 aaPredicted RBP34.17■■■■□ 3.06
C11orf49-201ENST00000278460 MROH2BQ7Z745 1585 aa34.15■■■■□ 3.06
C11orf49-201ENST00000278460 SMARCA4P51532 1647 aa34.04■■■■□ 3.04
C11orf49-201ENST00000278460 WIZO95785 1651 aa33.92■■■■□ 3.02
C11orf49-201ENST00000278460 PEG3Q9GZU2 1588 aa33.64■■■□□ 2.98
C11orf49-201ENST00000278460 TOP2AP11388 1531 aaKnown RBP33.57■■■□□ 2.97
C11orf49-201ENST00000278460 EIF4G1Q04637 1599 aaKnown RBP33.47■■■□□ 2.95
C11orf49-201ENST00000278460 SMARCA2P51531 1590 aa33.44■■■□□ 2.94
C11orf49-201ENST00000278460 ATAD2BQ9ULI0 1458 aa33.4■■■□□ 2.94
C11orf49-201ENST00000278460 BAZ1BQ9UIG0 1483 aaKnown RBP33.21■■■□□ 2.91
C11orf49-201ENST00000278460 CHIC1Q5VXU3 224 aa33.2■■■□□ 2.9
C11orf49-201ENST00000278460 CCDC88BA6NC98 1476 aa33.17■■■□□ 2.9
C11orf49-201ENST00000278460 HMGXB3Q12766 1538 aa33.13■■■□□ 2.89
C11orf49-201ENST00000278460 NCAPD3P42695 1498 aa33.12■■■□□ 2.89
C11orf49-201ENST00000278460 CC2D2AQ9P2K1 1620 aa32.98■■■□□ 2.87
C11orf49-201ENST00000278460 TRIM41Q8WV44 630 aa32.57■■■□□ 2.8
C11orf49-201ENST00000278460 ABCC8Q09428 1581 aa32.49■■■□□ 2.79
C11orf49-201ENST00000278460 PRDM2Q13029 1718 aa32.46■■■□□ 2.79
C11orf49-201ENST00000278460 CFTRP13569 1480 aa32.39■■■□□ 2.78
C11orf49-201ENST00000278460 WRNQ14191 1432 aaPredicted RBP eCLIP32.27■■■□□ 2.76
C11orf49-201ENST00000278460 CADPSQ9ULU8 1353 aa32.23■■■□□ 2.75
C11orf49-201ENST00000278460 SYNJ1O43426 1573 aa32.18■■■□□ 2.74
C11orf49-201ENST00000278460 BIVM-ERCC5R4GMW8 1640 aa32.1■■■□□ 2.73
C11orf49-201ENST00000278460 TOP2BQ02880 1626 aa32.09■■■□□ 2.73
C11orf49-201ENST00000278460 LAMC3Q9Y6N6 1575 aa32.04■■■□□ 2.72
C11orf49-201ENST00000278460 DNAJC5BQ9UF47 199 aa31.95■■■□□ 2.71
C11orf49-201ENST00000278460 CUX1P39880 1505 aa31.94■■■□□ 2.7
C11orf49-201ENST00000278460 NESP48681 1621 aa31.93■■■□□ 2.7
C11orf49-201ENST00000278460 FAM9AQ8IZU1 332 aaPredicted RBP31.92■■■□□ 2.7
C11orf49-201ENST00000278460 FANCD2Q9BXW9 1451 aa31.9■■■□□ 2.7
C11orf49-201ENST00000278460 LOC105371045A0A1W2PR82 267 aa31.88■■■□□ 2.69
C11orf49-201ENST00000278460 EEA1Q15075 1411 aa31.88■■■□□ 2.69
C11orf49-201ENST00000278460 SOGA1O94964 1423 aa31.84■■■□□ 2.69
C11orf49-201ENST00000278460 RUSC2Q8N2Y8 1516 aa31.74■■■□□ 2.67
C11orf49-201ENST00000278460 PDS5BQ9NTI5 1447 aa31.72■■■□□ 2.67
C11orf49-201ENST00000278460 CEP164Q9UPV0 1460 aa31.71■■■□□ 2.67
C11orf49-201ENST00000278460 DNMBPQ6XZF7 1577 aa31.69■■■□□ 2.66
C11orf49-201ENST00000278460 KIF21AQ7Z4S6 1674 aa31.68■■■□□ 2.66
C11orf49-201ENST00000278460 CSRNP3Q8WYN3 585 aa31.6■■■□□ 2.65
C11orf49-201ENST00000278460 TOPBP1Q92547 1522 aa31.58■■■□□ 2.65
C11orf49-201ENST00000278460 FGD5Q6ZNL6 1462 aa31.57■■■□□ 2.64
C11orf49-201ENST00000278460 KIF21BO75037 1637 aa31.51■■■□□ 2.64
C11orf49-201ENST00000278460 URB2Q14146 1524 aaKnown RBP31.51■■■□□ 2.63
C11orf49-201ENST00000278460 KIF27Q86VH2 1401 aa31.46■■■□□ 2.63
C11orf49-201ENST00000278460 GOLGA3Q08378 1498 aa31.42■■■□□ 2.62
C11orf49-201ENST00000278460 POLA1P09884 1462 aaPredicted RBP31.42■■■□□ 2.62
C11orf49-201ENST00000278460 EHMT2Q96KQ7 1210 aa31.4■■■□□ 2.62
C11orf49-201ENST00000278460 CUX2O14529 1486 aa31.35■■■□□ 2.61
C11orf49-201ENST00000278460 MRC2Q9UBG0 1479 aa31.33■■■□□ 2.61
C11orf49-201ENST00000278460 WDR97A6NE52 1622 aa31.32■■■□□ 2.6
C11orf49-201ENST00000278460 ABCA10Q8WWZ4 1543 aa31.32■■■□□ 2.6
C11orf49-201ENST00000278460 TNIKQ9UKE5 1360 aa31.31■■■□□ 2.6
C11orf49-201ENST00000278460 ERICH3Q5RHP9 1530 aa31.28■■■□□ 2.6
C11orf49-201ENST00000278460 RAD54L2Q9Y4B4 1467 aa31.27■■■□□ 2.6
C11orf49-201ENST00000278460 PRXQ9BXM0 1461 aa31.27■■■□□ 2.6
C11orf49-201ENST00000278460 RAPGEF2Q9Y4G8 1499 aa31.22■■■□□ 2.59
C11orf49-201ENST00000278460 WDR62O43379 1518 aa31.2■■■□□ 2.58
C11orf49-201ENST00000278460 UBTFP17480 764 aaKnown RBP31.16■■■□□ 2.58
C11orf49-201ENST00000278460 ERCC6Q03468 1493 aa31.16■■■□□ 2.58
C11orf49-201ENST00000278460 TARBP1Q13395 1621 aaKnown RBP31.16■■■□□ 2.58
C11orf49-201ENST00000278460 IGF1RP08069 1367 aa31.14■■■□□ 2.58
C11orf49-201ENST00000278460 CEP162Q5TB80 1403 aa31.13■■■□□ 2.57
C11orf49-201ENST00000278460 THOC2Q8NI27 1593 aaKnown RBP31.12■■■□□ 2.57
C11orf49-201ENST00000278460 ABCA5Q8WWZ7 1642 aa31.12■■■□□ 2.57
C11orf49-201ENST00000278460 CUL7Q14999 1698 aa31.04■■■□□ 2.56
C11orf49-201ENST00000278460 CARMIL1Q5VZK9 1371 aa30.99■■■□□ 2.55
C11orf49-201ENST00000278460 GAPVD1Q14C86 1478 aa30.97■■■□□ 2.55
C11orf49-201ENST00000278460 IFT140Q96RY7 1462 aa30.95■■■□□ 2.55
C11orf49-201ENST00000278460 TDRD9Q8NDG6 1382 aaKnown RBP30.93■■■□□ 2.54
C11orf49-201ENST00000278460 PBRM1Q86U86 1689 aa30.93■■■□□ 2.54
C11orf49-201ENST00000278460 CLIP1P30622 1438 aa30.88■■■□□ 2.53
C11orf49-201ENST00000278460 CTTNBP2Q8WZ74 1663 aa30.76■■■□□ 2.51
C11orf49-201ENST00000278460 AQRO60306 1485 aaKnown RBP eCLIP30.74■■■□□ 2.51
C11orf49-201ENST00000278460 ZNF608Q9ULD9 1512 aaPredicted RBP30.73■■■□□ 2.51
C11orf49-201ENST00000278460 GRIN2BQ13224 1484 aa30.73■■■□□ 2.51
C11orf49-201ENST00000278460 EIF4G3O43432 1585 aaKnown RBP30.72■■■□□ 2.51
C11orf49-201ENST00000278460 ADAMTS12P58397 1594 aa30.69■■■□□ 2.5
C11orf49-201ENST00000278460 FHAD1B1AJZ9 1412 aa30.64■■■□□ 2.49
C11orf49-201ENST00000278460 VPS8Q8N3P4 1428 aa30.64■■■□□ 2.49
C11orf49-201ENST00000278460 ARAP1Q96P48 1450 aa30.6■■■□□ 2.49
C11orf49-201ENST00000278460 ARHGAP35Q9NRY4 1499 aa30.58■■■□□ 2.49
C11orf49-201ENST00000278460 RANGAP1P46060 587 aaPredicted RBP30.57■■■□□ 2.48
C11orf49-201ENST00000278460 TRIM26Q12899 539 aaPredicted RBP30.51■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms