RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 PPARGC1BQ86YN6 1023 aaKnown RBP34.44■■■■□ 3.1
CCDC7-201ENST00000277657 EIF4G3O43432 1585 aaKnown RBP34.44■■■■□ 3.1
CCDC7-201ENST00000277657 EFCAB5A4FU69 1503 aa34.29■■■■□ 3.08
CCDC7-201ENST00000277657 SNAPC4Q5SXM2 1469 aa34.27■■■■□ 3.08
CCDC7-201ENST00000277657 MAGI1Q96QZ7 1491 aaPredicted RBP34.22■■■■□ 3.07
CCDC7-201ENST00000277657 APLP2Q06481 763 aa34.19■■■■□ 3.06
CCDC7-201ENST00000277657 SAMD9Q5K651 1589 aa34.15■■■■□ 3.06
CCDC7-201ENST00000277657 GRIN2AQ12879 1464 aa34.12■■■■□ 3.05
CCDC7-201ENST00000277657 TTBK1Q5TCY1 1321 aaPredicted RBP34.1■■■■□ 3.05
CCDC7-201ENST00000277657 FHOD3Q2V2M9 1422 aa34.1■■■■□ 3.05
CCDC7-201ENST00000277657 IQGAP2Q13576 1575 aa34.09■■■■□ 3.05
CCDC7-201ENST00000277657 SYNJ2O15056 1496 aa34.09■■■■□ 3.05
CCDC7-201ENST00000277657 P3H3Q8IVL6 736 aa34.05■■■■□ 3.04
CCDC7-201ENST00000277657 MAP3K1Q13233 1512 aa34.01■■■■□ 3.04
CCDC7-201ENST00000277657 KIAA0586Q9BVV6 1533 aa34■■■■□ 3.03
CCDC7-201ENST00000277657 PCF11O94913 1555 aaKnown RBP33.99■■■■□ 3.03
CCDC7-201ENST00000277657 FMN1Q68DA7 1419 aa33.97■■■■□ 3.03
CCDC7-201ENST00000277657 CHMP7Q8WUX9 453 aaPredicted RBP33.95■■■■□ 3.03
CCDC7-201ENST00000277657 UGGT2Q9NYU1 1516 aa33.95■■■■□ 3.03
CCDC7-201ENST00000277657 FYCO1Q9BQS8 1478 aa33.95■■■■□ 3.02
CCDC7-201ENST00000277657 CASKIN1Q8WXD9 1431 aa33.94■■■■□ 3.02
CCDC7-201ENST00000277657 TIAM1Q13009 1591 aa33.93■■■■□ 3.02
CCDC7-201ENST00000277657 KANK4Q5T7N3 995 aaPredicted RBP33.93■■■■□ 3.02
CCDC7-201ENST00000277657 CEP170Q5SW79 1584 aa33.9■■■■□ 3.02
CCDC7-201ENST00000277657 NUP160Q12769 1436 aa33.87■■■■□ 3.01
CCDC7-201ENST00000277657 HRCP23327 699 aa33.86■■■■□ 3.01
CCDC7-201ENST00000277657 CFAP43Q8NDM7 1665 aa33.86■■■■□ 3.01
CCDC7-201ENST00000277657 FBLN2P98095 1184 aa33.8■■■■□ 3
CCDC7-201ENST00000277657 LRRC9Q6ZRR7 1453 aa33.77■■■■□ 3
CCDC7-201ENST00000277657 DISP1Q96F81 1524 aa33.76■■■■□ 3
CCDC7-201ENST00000277657 KIAA0556O60303 1618 aa33.75■■■□□ 2.99
CCDC7-201ENST00000277657 ATP1B4Q9UN42 357 aaPredicted RBP33.69■■■□□ 2.98
CCDC7-201ENST00000277657 LRRIQ1Q96JM4 1722 aa33.66■■■□□ 2.98
CCDC7-201ENST00000277657 CHD1O14646 1710 aa33.65■■■□□ 2.98
CCDC7-201ENST00000277657 RRBP1Q9P2E9 1410 aaKnown RBP33.63■■■□□ 2.97
CCDC7-201ENST00000277657 HECW1Q76N89 1606 aa33.6■■■□□ 2.97
CCDC7-201ENST00000277657 JPH4Q96JJ6 628 aa33.59■■■□□ 2.97
CCDC7-201ENST00000277657 CCDC18Q5T9S5 1454 aa33.56■■■□□ 2.96
CCDC7-201ENST00000277657 CARMIL2Q6F5E8 1435 aa33.53■■■□□ 2.96
CCDC7-201ENST00000277657 CCNB3Q8WWL7 1395 aa33.48■■■□□ 2.95
CCDC7-201ENST00000277657 EPRSP07814 1512 aaKnown RBP33.47■■■□□ 2.95
CCDC7-201ENST00000277657 PHLDB1Q86UU1 1377 aa33.47■■■□□ 2.95
CCDC7-201ENST00000277657 MTUS2Q5JR59 1369 aa33.44■■■□□ 2.94
CCDC7-201ENST00000277657 RAPGEF6Q8TEU7 1601 aa33.44■■■□□ 2.94
CCDC7-201ENST00000277657 HNRNPUL2Q1KMD3 747 aaKnown RBP33.44■■■□□ 2.94
CCDC7-201ENST00000277657 EHBP1L1Q8N3D4 1523 aa33.42■■■□□ 2.94
CCDC7-201ENST00000277657 SHROOM2Q13796 1616 aa33.39■■■□□ 2.94
CCDC7-201ENST00000277657 NUP153P49790 1475 aaKnown RBP33.38■■■□□ 2.93
CCDC7-201ENST00000277657 MAGI3Q5TCQ9 1506 aa33.38■■■□□ 2.93
CCDC7-201ENST00000277657 CDK13Q14004 1512 aaKnown RBP33.36■■■□□ 2.93
CCDC7-201ENST00000277657 ZEB1P37275 1124 aaPredicted RBP33.36■■■□□ 2.93
CCDC7-201ENST00000277657 PRG4Q92954 1404 aaPredicted RBP33.35■■■□□ 2.93
CCDC7-201ENST00000277657 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.34■■■□□ 2.93
CCDC7-201ENST00000277657 SUPT6HQ7KZ85 1726 aaKnown RBP33.33■■■□□ 2.93
CCDC7-201ENST00000277657 PLB1Q6P1J6 1458 aa33.3■■■□□ 2.92
CCDC7-201ENST00000277657 NCOA2Q15596 1464 aa33.3■■■□□ 2.92
CCDC7-201ENST00000277657 ARHGEF11O15085 1522 aa33.29■■■□□ 2.92
CCDC7-201ENST00000277657 CLASP1Q7Z460 1538 aa33.29■■■□□ 2.92
CCDC7-201ENST00000277657 ABCA8O94911 1581 aa33.26■■■□□ 2.91
CCDC7-201ENST00000277657 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.24■■■□□ 2.91
CCDC7-201ENST00000277657 CCER1Q8TC90 406 aaPredicted RBP33.24■■■□□ 2.91
CCDC7-201ENST00000277657 FGD6Q6ZV73 1430 aa33.22■■■□□ 2.91
CCDC7-201ENST00000277657 MYOM3Q5VTT5 1437 aa33.19■■■□□ 2.9
CCDC7-201ENST00000277657 ARID3CA6NKF2 412 aa33.18■■■□□ 2.9
CCDC7-201ENST00000277657 PTPRGP23470 1445 aa33.18■■■□□ 2.9
CCDC7-201ENST00000277657 FAM50AQ14320 339 aaKnown RBP33.12■■■□□ 2.89
CCDC7-201ENST00000277657 CDK11AQ9UQ88 783 aaPredicted RBP33.12■■■□□ 2.89
CCDC7-201ENST00000277657 ERCC6L2Q5T890 1561 aa33.11■■■□□ 2.89
CCDC7-201ENST00000277657 ITGAEP38570 1179 aa33.06■■■□□ 2.88
CCDC7-201ENST00000277657 TROQ12816 1431 aaPredicted RBP33.06■■■□□ 2.88
CCDC7-201ENST00000277657 ATP10BO94823 1461 aa33.04■■■□□ 2.88
CCDC7-201ENST00000277657 PTPN23Q9H3S7 1636 aa33.02■■■□□ 2.88
CCDC7-201ENST00000277657 MIA2Q96PC5 1412 aa33■■■□□ 2.87
CCDC7-201ENST00000277657 UACAQ9BZF9 1416 aa33■■■□□ 2.87
CCDC7-201ENST00000277657 ADCY10Q96PN6 1610 aa33■■■□□ 2.87
CCDC7-201ENST00000277657 TCOF1Q13428 1488 aaKnown RBP33■■■□□ 2.87
CCDC7-201ENST00000277657 ABCC2Q92887 1545 aa32.91■■■□□ 2.86
CCDC7-201ENST00000277657 DNAJC5Q9H3Z4 198 aa32.91■■■□□ 2.86
CCDC7-201ENST00000277657 SETD5Q9C0A6 1442 aa32.9■■■□□ 2.86
CCDC7-201ENST00000277657 KIF14Q15058 1648 aa32.89■■■□□ 2.86
CCDC7-201ENST00000277657 PLEKHD1A6NEE1 506 aa32.88■■■□□ 2.85
CCDC7-201ENST00000277657 RAB3GAP2Q9H2M9 1393 aa32.87■■■□□ 2.85
CCDC7-201ENST00000277657 PTPRKQ15262 1439 aa32.86■■■□□ 2.85
CCDC7-201ENST00000277657 DHX57Q6P158 1386 aaKnown RBP32.86■■■□□ 2.85
CCDC7-201ENST00000277657 UHRF1BP1LA0JNW5 1464 aa32.83■■■□□ 2.85
CCDC7-201ENST00000277657 OSCARQ8IYS5 282 aa32.82■■■□□ 2.85
CCDC7-201ENST00000277657 ITSN2Q9NZM3 1697 aa32.82■■■□□ 2.84
CCDC7-201ENST00000277657 GPATCH8Q9UKJ3 1502 aaKnown RBP32.8■■■□□ 2.84
CCDC7-201ENST00000277657 ABCC10Q5T3U5 1492 aa32.79■■■□□ 2.84
CCDC7-201ENST00000277657 CLSPNQ9HAW4 1339 aa32.78■■■□□ 2.84
CCDC7-201ENST00000277657 HFM1A2PYH4 1435 aa32.75■■■□□ 2.83
CCDC7-201ENST00000277657 KDM5BQ9UGL1 1544 aa32.71■■■□□ 2.83
CCDC7-201ENST00000277657 CDC42BPAQ5VT25 1732 aa32.7■■■□□ 2.83
CCDC7-201ENST00000277657 DNMT1P26358 1616 aaKnown RBP32.68■■■□□ 2.82
CCDC7-201ENST00000277657 CFDP1Q9UEE9 299 aaPredicted RBP32.67■■■□□ 2.82
CCDC7-201ENST00000277657 ZCCHC11Q5TAX3 1644 aaKnown RBP32.67■■■□□ 2.82
CCDC7-201ENST00000277657 NAIPQ13075 1403 aa32.67■■■□□ 2.82
CCDC7-201ENST00000277657 AKNAQ7Z591 1439 aa32.67■■■□□ 2.82
CCDC7-201ENST00000277657 CAMSAP2Q08AD1 1489 aa32.66■■■□□ 2.82
CCDC7-201ENST00000277657 ZNF644Q9H582 1327 aaPredicted RBP32.65■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms