RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 WDR62O43379 1518 aa23.87■■□□□ 1.41
MAP1LC3B-201ENST00000268607 THOC2Q8NI27 1593 aaKnown RBP23.86■■□□□ 1.41
MAP1LC3B-201ENST00000268607 WDR97A6NE52 1622 aa23.83■■□□□ 1.41
MAP1LC3B-201ENST00000268607 FBLN2P98095 1184 aa23.82■■□□□ 1.4
MAP1LC3B-201ENST00000268607 ERICH3Q5RHP9 1530 aa23.8■■□□□ 1.4
MAP1LC3B-201ENST00000268607 YTHDC1Q96MU7 727 aaKnown RBP23.79■■□□□ 1.4
MAP1LC3B-201ENST00000268607 ABCA5Q8WWZ7 1642 aa23.78■■□□□ 1.4
MAP1LC3B-201ENST00000268607 IFT140Q96RY7 1462 aa23.74■■□□□ 1.39
MAP1LC3B-201ENST00000268607 APLP2Q06481 763 aa23.73■■□□□ 1.39
MAP1LC3B-201ENST00000268607 VPS8Q8N3P4 1428 aa23.72■■□□□ 1.39
MAP1LC3B-201ENST00000268607 ZNF316A6NFI3 1004 aaPredicted RBP23.71■■□□□ 1.39
MAP1LC3B-201ENST00000268607 ATP1B4Q9UN42 357 aaPredicted RBP23.67■■□□□ 1.38
MAP1LC3B-201ENST00000268607 HNRNPUL2Q1KMD3 747 aaKnown RBP23.67■■□□□ 1.38
MAP1LC3B-201ENST00000268607 ARAP1Q96P48 1450 aa23.66■■□□□ 1.38
MAP1LC3B-201ENST00000268607 EIF4G3O43432 1585 aaKnown RBP23.64■■□□□ 1.38
MAP1LC3B-201ENST00000268607 PBRM1Q86U86 1689 aa23.63■■□□□ 1.37
MAP1LC3B-201ENST00000268607 GRIN2BQ13224 1484 aa23.63■■□□□ 1.37
MAP1LC3B-201ENST00000268607 SNAPC4Q5SXM2 1469 aa23.63■■□□□ 1.37
MAP1LC3B-201ENST00000268607 ARHGAP35Q9NRY4 1499 aa23.62■■□□□ 1.37
MAP1LC3B-201ENST00000268607 CHMP7Q8WUX9 453 aaPredicted RBP23.61■■□□□ 1.37
MAP1LC3B-201ENST00000268607 CUL7Q14999 1698 aa23.6■■□□□ 1.37
MAP1LC3B-201ENST00000268607 MIER1Q8N108 512 aa23.56■■□□□ 1.36
MAP1LC3B-201ENST00000268607 FHAD1B1AJZ9 1412 aa23.55■■□□□ 1.36
MAP1LC3B-201ENST00000268607 FHOD3Q2V2M9 1422 aa23.55■■□□□ 1.36
MAP1LC3B-201ENST00000268607 BCL11AQ9H165 835 aa23.55■■□□□ 1.36
MAP1LC3B-201ENST00000268607 KANK4Q5T7N3 995 aaPredicted RBP23.51■■□□□ 1.35
MAP1LC3B-201ENST00000268607 ARID3CA6NKF2 412 aa23.5■■□□□ 1.35
MAP1LC3B-201ENST00000268607 ADAMTS12P58397 1594 aa23.5■■□□□ 1.35
MAP1LC3B-201ENST00000268607 CTTNBP2Q8WZ74 1663 aa23.41■■□□□ 1.34
MAP1LC3B-201ENST00000268607 GRIN2AQ12879 1464 aa23.4■■□□□ 1.34
MAP1LC3B-201ENST00000268607 SYNJ2O15056 1496 aa23.34■■□□□ 1.33
MAP1LC3B-201ENST00000268607 MAGI1Q96QZ7 1491 aaPredicted RBP23.34■■□□□ 1.33
MAP1LC3B-201ENST00000268607 ANP32EQ9BTT0 268 aa23.34■■□□□ 1.33
MAP1LC3B-201ENST00000268607 IQGAP2Q13576 1575 aa23.29■■□□□ 1.32
MAP1LC3B-201ENST00000268607 CEP170Q5SW79 1584 aa23.29■■□□□ 1.32
MAP1LC3B-201ENST00000268607 JPH4Q96JJ6 628 aa23.27■■□□□ 1.32
MAP1LC3B-201ENST00000268607 ITGAEP38570 1179 aa23.24■■□□□ 1.31
MAP1LC3B-201ENST00000268607 PCF11O94913 1555 aaKnown RBP23.24■■□□□ 1.31
MAP1LC3B-201ENST00000268607 KIAA0586Q9BVV6 1533 aa23.23■■□□□ 1.31
MAP1LC3B-201ENST00000268607 EFCAB5A4FU69 1503 aa23.18■■□□□ 1.3
MAP1LC3B-201ENST00000268607 SAMD9Q5K651 1589 aa23.18■■□□□ 1.3
MAP1LC3B-201ENST00000268607 SUPT16HQ9Y5B9 1047 aaKnown RBP23.16■■□□□ 1.3
MAP1LC3B-201ENST00000268607 CHD1O14646 1710 aa23.16■■□□□ 1.3
MAP1LC3B-201ENST00000268607 DISP1Q96F81 1524 aa23.15■■□□□ 1.3
MAP1LC3B-201ENST00000268607 TSHZ2Q9NRE2 1034 aa23.15■■□□□ 1.3
MAP1LC3B-201ENST00000268607 NUP160Q12769 1436 aa23.14■■□□□ 1.29
MAP1LC3B-201ENST00000268607 FMN1Q68DA7 1419 aa23.14■■□□□ 1.29
MAP1LC3B-201ENST00000268607 CASKIN1Q8WXD9 1431 aa23.1■■□□□ 1.29
MAP1LC3B-201ENST00000268607 CCNB3Q8WWL7 1395 aa23.08■■□□□ 1.29
MAP1LC3B-201ENST00000268607 TIAM1Q13009 1591 aa23.08■■□□□ 1.29
MAP1LC3B-201ENST00000268607 UGGT2Q9NYU1 1516 aa23.08■■□□□ 1.29
MAP1LC3B-201ENST00000268607 RRBP1Q9P2E9 1410 aaKnown RBP23.08■■□□□ 1.29
MAP1LC3B-201ENST00000268607 PRG4Q92954 1404 aaPredicted RBP23.05■■□□□ 1.28
MAP1LC3B-201ENST00000268607 KIAA0556O60303 1618 aa23.04■■□□□ 1.28
MAP1LC3B-201ENST00000268607 LRRC9Q6ZRR7 1453 aa23.04■■□□□ 1.28
MAP1LC3B-201ENST00000268607 FYCO1Q9BQS8 1478 aa23.04■■□□□ 1.28
MAP1LC3B-201ENST00000268607 PLB1Q6P1J6 1458 aa23.04■■□□□ 1.28
MAP1LC3B-201ENST00000268607 CLSPNQ9HAW4 1339 aa23.03■■□□□ 1.28
MAP1LC3B-201ENST00000268607 LRRIQ1Q96JM4 1722 aa23.03■■□□□ 1.28
MAP1LC3B-201ENST00000268607 CDK13Q14004 1512 aaKnown RBP23.03■■□□□ 1.28
MAP1LC3B-201ENST00000268607 PHLDB1Q86UU1 1377 aa23.02■■□□□ 1.28
MAP1LC3B-201ENST00000268607 FAM50AQ14320 339 aaKnown RBP23.01■■□□□ 1.27
MAP1LC3B-201ENST00000268607 MTUS2Q5JR59 1369 aa23.01■■□□□ 1.27
MAP1LC3B-201ENST00000268607 ERCC6L2Q5T890 1561 aa22.99■■□□□ 1.27
MAP1LC3B-201ENST00000268607 DHX57Q6P158 1386 aaKnown RBP22.99■■□□□ 1.27
MAP1LC3B-201ENST00000268607 CARMIL2Q6F5E8 1435 aa22.97■■□□□ 1.27
MAP1LC3B-201ENST00000268607 MAGI3Q5TCQ9 1506 aa22.93■■□□□ 1.26
MAP1LC3B-201ENST00000268607 EPRSP07814 1512 aaKnown RBP22.92■■□□□ 1.26
MAP1LC3B-201ENST00000268607 MAP3K1Q13233 1512 aa22.92■■□□□ 1.26
MAP1LC3B-201ENST00000268607 NUP153P49790 1475 aaKnown RBP22.9■■□□□ 1.26
MAP1LC3B-201ENST00000268607 CFAP43Q8NDM7 1665 aa22.89■■□□□ 1.25
MAP1LC3B-201ENST00000268607 PTPRGP23470 1445 aa22.88■■□□□ 1.25
MAP1LC3B-201ENST00000268607 RAB3GAP2Q9H2M9 1393 aa22.85■■□□□ 1.25
MAP1LC3B-201ENST00000268607 OSCARQ8IYS5 282 aa22.84■■□□□ 1.25
MAP1LC3B-201ENST00000268607 HECW1Q76N89 1606 aa22.83■■□□□ 1.24
MAP1LC3B-201ENST00000268607 RAPGEF6Q8TEU7 1601 aa22.82■■□□□ 1.24
MAP1LC3B-201ENST00000268607 NCOA2Q15596 1464 aa22.8■■□□□ 1.24
MAP1LC3B-201ENST00000268607 PRKCSHP14314 528 aaPredicted RBP22.78■■□□□ 1.24
MAP1LC3B-201ENST00000268607 ZNF644Q9H582 1327 aaPredicted RBP22.75■■□□□ 1.23
MAP1LC3B-201ENST00000268607 CCDC18Q5T9S5 1454 aa22.75■■□□□ 1.23
MAP1LC3B-201ENST00000268607 CLASP1Q7Z460 1538 aa22.75■■□□□ 1.23
MAP1LC3B-201ENST00000268607 CHIC2Q9UKJ5 165 aa22.74■■□□□ 1.23
MAP1LC3B-201ENST00000268607 KCNH8Q96L42 1107 aa22.74■■□□□ 1.23
MAP1LC3B-201ENST00000268607 ZNF777Q9ULD5 760 aaPredicted RBP22.74■■□□□ 1.23
MAP1LC3B-201ENST00000268607 SETD5Q9C0A6 1442 aa22.73■■□□□ 1.23
MAP1LC3B-201ENST00000268607 BCANQ96GW7 911 aa22.72■■□□□ 1.23
MAP1LC3B-201ENST00000268607 ATP10BO94823 1461 aa22.72■■□□□ 1.23
MAP1LC3B-201ENST00000268607 CDK11AQ9UQ88 783 aaPredicted RBP22.72■■□□□ 1.23
MAP1LC3B-201ENST00000268607 PLEKHD1A6NEE1 506 aa22.71■■□□□ 1.23
MAP1LC3B-201ENST00000268607 SHROOM2Q13796 1616 aa22.7■■□□□ 1.23
MAP1LC3B-201ENST00000268607 FGD6Q6ZV73 1430 aa22.69■■□□□ 1.22
MAP1LC3B-201ENST00000268607 EHBP1L1Q8N3D4 1523 aa22.68■■□□□ 1.22
MAP1LC3B-201ENST00000268607 ABCA8O94911 1581 aa22.67■■□□□ 1.22
MAP1LC3B-201ENST00000268607 UACAQ9BZF9 1416 aa22.66■■□□□ 1.22
MAP1LC3B-201ENST00000268607 SIN3AQ96ST3 1273 aa22.66■■□□□ 1.22
MAP1LC3B-201ENST00000268607 SUPT6HQ7KZ85 1726 aaKnown RBP22.66■■□□□ 1.22
MAP1LC3B-201ENST00000268607 MYOM3Q5VTT5 1437 aa22.65■■□□□ 1.22
MAP1LC3B-201ENST00000268607 PTPRKQ15262 1439 aa22.62■■□□□ 1.21
MAP1LC3B-201ENST00000268607 KIF14Q15058 1648 aa22.62■■□□□ 1.21
MAP1LC3B-201ENST00000268607 RRP7BPQ9NSQ0 103 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms