RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 ADAMTS12P58397 1594 aa18.07■□□□□ 0.48
SCAF11-201ENST00000266589 FHAD1B1AJZ9 1412 aa18.04■□□□□ 0.48
SCAF11-201ENST00000266589 SNAPC4Q5SXM2 1469 aa17.98■□□□□ 0.47
SCAF11-201ENST00000266589 EFCAB5A4FU69 1503 aa17.97■□□□□ 0.47
SCAF11-201ENST00000266589 TTBK1Q5TCY1 1321 aaPredicted RBP17.96■□□□□ 0.47
SCAF11-201ENST00000266589 APLP2Q06481 763 aa17.94■□□□□ 0.46
SCAF11-201ENST00000266589 MAGI1Q96QZ7 1491 aaPredicted RBP17.92■□□□□ 0.46
SCAF11-201ENST00000266589 SAMD9Q5K651 1589 aa17.89■□□□□ 0.45
SCAF11-201ENST00000266589 FHOD3Q2V2M9 1422 aa17.88■□□□□ 0.45
SCAF11-201ENST00000266589 IQGAP2Q13576 1575 aa17.88■□□□□ 0.45
SCAF11-201ENST00000266589 P3H3Q8IVL6 736 aa17.88■□□□□ 0.45
SCAF11-201ENST00000266589 GRIN2AQ12879 1464 aa17.88■□□□□ 0.45
SCAF11-201ENST00000266589 SYNJ2O15056 1496 aa17.85■□□□□ 0.45
SCAF11-201ENST00000266589 PCF11O94913 1555 aaKnown RBP17.84■□□□□ 0.45
SCAF11-201ENST00000266589 KIAA0586Q9BVV6 1533 aa17.8■□□□□ 0.44
SCAF11-201ENST00000266589 CHMP7Q8WUX9 453 aaPredicted RBP17.79■□□□□ 0.44
SCAF11-201ENST00000266589 FMN1Q68DA7 1419 aa17.79■□□□□ 0.44
SCAF11-201ENST00000266589 TIAM1Q13009 1591 aa17.79■□□□□ 0.44
SCAF11-201ENST00000266589 CEP170Q5SW79 1584 aa17.78■□□□□ 0.44
SCAF11-201ENST00000266589 FYCO1Q9BQS8 1478 aa17.78■□□□□ 0.44
SCAF11-201ENST00000266589 MAP3K1Q13233 1512 aa17.78■□□□□ 0.44
SCAF11-201ENST00000266589 KANK4Q5T7N3 995 aaPredicted RBP17.77■□□□□ 0.44
SCAF11-201ENST00000266589 UGGT2Q9NYU1 1516 aa17.77■□□□□ 0.44
SCAF11-201ENST00000266589 CFAP43Q8NDM7 1665 aa17.76■□□□□ 0.43
SCAF11-201ENST00000266589 FBLN2P98095 1184 aa17.76■□□□□ 0.43
SCAF11-201ENST00000266589 CASKIN1Q8WXD9 1431 aa17.76■□□□□ 0.43
SCAF11-201ENST00000266589 NUP160Q12769 1436 aa17.72■□□□□ 0.43
SCAF11-201ENST00000266589 HRCP23327 699 aa17.71■□□□□ 0.43
SCAF11-201ENST00000266589 KIAA0556O60303 1618 aa17.7■□□□□ 0.42
SCAF11-201ENST00000266589 ATP1B4Q9UN42 357 aaPredicted RBP17.7■□□□□ 0.42
SCAF11-201ENST00000266589 CHD1O14646 1710 aa17.69■□□□□ 0.42
SCAF11-201ENST00000266589 DISP1Q96F81 1524 aa17.68■□□□□ 0.42
SCAF11-201ENST00000266589 LRRC9Q6ZRR7 1453 aa17.68■□□□□ 0.42
SCAF11-201ENST00000266589 LRRIQ1Q96JM4 1722 aa17.68■□□□□ 0.42
SCAF11-201ENST00000266589 HECW1Q76N89 1606 aa17.63■□□□□ 0.41
SCAF11-201ENST00000266589 RRBP1Q9P2E9 1410 aaKnown RBP17.59■□□□□ 0.41
SCAF11-201ENST00000266589 JPH4Q96JJ6 628 aa17.58■□□□□ 0.4
SCAF11-201ENST00000266589 CCDC18Q5T9S5 1454 aa17.58■□□□□ 0.4
SCAF11-201ENST00000266589 CARMIL2Q6F5E8 1435 aa17.57■□□□□ 0.4
SCAF11-201ENST00000266589 RAPGEF6Q8TEU7 1601 aa17.54■□□□□ 0.4
SCAF11-201ENST00000266589 HNRNPUL2Q1KMD3 747 aaKnown RBP17.54■□□□□ 0.4
SCAF11-201ENST00000266589 EPRSP07814 1512 aaKnown RBP17.54■□□□□ 0.4
SCAF11-201ENST00000266589 MTUS2Q5JR59 1369 aa17.53■□□□□ 0.4
SCAF11-201ENST00000266589 PHLDB1Q86UU1 1377 aa17.53■□□□□ 0.4
SCAF11-201ENST00000266589 CCNB3Q8WWL7 1395 aa17.53■□□□□ 0.4
SCAF11-201ENST00000266589 EHBP1L1Q8N3D4 1523 aa17.52■□□□□ 0.4
SCAF11-201ENST00000266589 CDK13Q14004 1512 aaKnown RBP17.51■□□□□ 0.39
SCAF11-201ENST00000266589 MAGI3Q5TCQ9 1506 aa17.5■□□□□ 0.39
SCAF11-201ENST00000266589 SHROOM2Q13796 1616 aa17.5■□□□□ 0.39
SCAF11-201ENST00000266589 SUPT6HQ7KZ85 1726 aaKnown RBP17.49■□□□□ 0.39
SCAF11-201ENST00000266589 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.49■□□□□ 0.39
SCAF11-201ENST00000266589 NUP153P49790 1475 aaKnown RBP17.49■□□□□ 0.39
SCAF11-201ENST00000266589 PRG4Q92954 1404 aaPredicted RBP17.48■□□□□ 0.39
SCAF11-201ENST00000266589 PLB1Q6P1J6 1458 aa17.46■□□□□ 0.39
SCAF11-201ENST00000266589 ARID3CA6NKF2 412 aa17.45■□□□□ 0.38
SCAF11-201ENST00000266589 NCOA2Q15596 1464 aa17.45■□□□□ 0.38
SCAF11-201ENST00000266589 ZEB1P37275 1124 aaPredicted RBP17.44■□□□□ 0.38
SCAF11-201ENST00000266589 CLASP1Q7Z460 1538 aa17.44■□□□□ 0.38
SCAF11-201ENST00000266589 CCER1Q8TC90 406 aaPredicted RBP17.43■□□□□ 0.38
SCAF11-201ENST00000266589 ABCA8O94911 1581 aa17.42■□□□□ 0.38
SCAF11-201ENST00000266589 ARHGEF11O15085 1522 aa17.41■□□□□ 0.38
SCAF11-201ENST00000266589 FGD6Q6ZV73 1430 aa17.4■□□□□ 0.38
SCAF11-201ENST00000266589 MYOM3Q5VTT5 1437 aa17.38■□□□□ 0.37
SCAF11-201ENST00000266589 FAM50AQ14320 339 aaKnown RBP17.38■□□□□ 0.37
SCAF11-201ENST00000266589 ERCC6L2Q5T890 1561 aa17.38■□□□□ 0.37
SCAF11-201ENST00000266589 PTPRGP23470 1445 aa17.38■□□□□ 0.37
SCAF11-201ENST00000266589 ITGAEP38570 1179 aa17.38■□□□□ 0.37
SCAF11-201ENST00000266589 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.36■□□□□ 0.37
SCAF11-201ENST00000266589 CDK11AQ9UQ88 783 aaPredicted RBP17.35■□□□□ 0.37
SCAF11-201ENST00000266589 PTPN23Q9H3S7 1636 aa17.32■□□□□ 0.36
SCAF11-201ENST00000266589 TROQ12816 1431 aaPredicted RBP17.31■□□□□ 0.36
SCAF11-201ENST00000266589 ATP10BO94823 1461 aa17.3■□□□□ 0.36
SCAF11-201ENST00000266589 ADCY10Q96PN6 1610 aa17.3■□□□□ 0.36
SCAF11-201ENST00000266589 UACAQ9BZF9 1416 aa17.29■□□□□ 0.36
SCAF11-201ENST00000266589 KIF14Q15058 1648 aa17.27■□□□□ 0.36
SCAF11-201ENST00000266589 TCOF1Q13428 1488 aaKnown RBP17.27■□□□□ 0.35
SCAF11-201ENST00000266589 MIA2Q96PC5 1412 aa17.26■□□□□ 0.35
SCAF11-201ENST00000266589 ABCC2Q92887 1545 aa17.25■□□□□ 0.35
SCAF11-201ENST00000266589 ITSN2Q9NZM3 1697 aa17.24■□□□□ 0.35
SCAF11-201ENST00000266589 SETD5Q9C0A6 1442 aa17.22■□□□□ 0.35
SCAF11-201ENST00000266589 PLEKHD1A6NEE1 506 aa17.22■□□□□ 0.35
SCAF11-201ENST00000266589 RAB3GAP2Q9H2M9 1393 aa17.22■□□□□ 0.35
SCAF11-201ENST00000266589 PTPRKQ15262 1439 aa17.2■□□□□ 0.34
SCAF11-201ENST00000266589 DHX57Q6P158 1386 aaKnown RBP17.2■□□□□ 0.34
SCAF11-201ENST00000266589 OSCARQ8IYS5 282 aa17.19■□□□□ 0.34
SCAF11-201ENST00000266589 UHRF1BP1LA0JNW5 1464 aa17.17■□□□□ 0.34
SCAF11-201ENST00000266589 GPATCH8Q9UKJ3 1502 aaKnown RBP17.17■□□□□ 0.34
SCAF11-201ENST00000266589 CDC42BPAQ5VT25 1732 aa17.16■□□□□ 0.34
SCAF11-201ENST00000266589 ABCC10Q5T3U5 1492 aa17.16■□□□□ 0.34
SCAF11-201ENST00000266589 ZCCHC11Q5TAX3 1644 aaKnown RBP17.15■□□□□ 0.34
SCAF11-201ENST00000266589 HFM1A2PYH4 1435 aa17.14■□□□□ 0.33
SCAF11-201ENST00000266589 DNMT1P26358 1616 aaKnown RBP17.13■□□□□ 0.33
SCAF11-201ENST00000266589 CAMSAP2Q08AD1 1489 aa17.13■□□□□ 0.33
SCAF11-201ENST00000266589 CFDP1Q9UEE9 299 aaPredicted RBP17.12■□□□□ 0.33
SCAF11-201ENST00000266589 KDM5BQ9UGL1 1544 aa17.12■□□□□ 0.33
SCAF11-201ENST00000266589 CLSPNQ9HAW4 1339 aa17.12■□□□□ 0.33
SCAF11-201ENST00000266589 ZNF644Q9H582 1327 aaPredicted RBP17.11■□□□□ 0.33
SCAF11-201ENST00000266589 GCC2Q8IWJ2 1684 aa17.1■□□□□ 0.33
SCAF11-201ENST00000266589 DAPK1P53355 1430 aa17.1■□□□□ 0.33
SCAF11-201ENST00000266589 NAIPQ13075 1403 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms