RNA–Protein interactions for RNA: ENST00000264454.7

SEC22C-201, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22C, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-201ENST00000264454 ZNF608Q9ULD9 1512 aaPredicted RBP15.47■□□□□ 0.07
SEC22C-201ENST00000264454 CTTNBP2Q8WZ74 1663 aa15.46■□□□□ 0.07
SEC22C-201ENST00000264454 EFCAB5A4FU69 1503 aa15.45■□□□□ 0.06
SEC22C-201ENST00000264454 ADAMTS12P58397 1594 aa15.45■□□□□ 0.06
SEC22C-201ENST00000264454 EIF4G3O43432 1585 aaKnown RBP15.43■□□□□ 0.06
SEC22C-201ENST00000264454 PPARGC1BQ86YN6 1023 aaKnown RBP15.42■□□□□ 0.06
SEC22C-201ENST00000264454 MAGI1Q96QZ7 1491 aaPredicted RBP15.41■□□□□ 0.06
SEC22C-201ENST00000264454 SNAPC4Q5SXM2 1469 aa15.38■□□□□ 0.05
SEC22C-201ENST00000264454 MAP3K1Q13233 1512 aa15.36■□□□□ 0.05
SEC22C-201ENST00000264454 SYNJ2O15056 1496 aa15.34■□□□□ 0.05
SEC22C-201ENST00000264454 FMN1Q68DA7 1419 aa15.34■□□□□ 0.05
SEC22C-201ENST00000264454 GRIN2AQ12879 1464 aa15.33■□□□□ 0.05
SEC22C-201ENST00000264454 SAMD9Q5K651 1589 aa15.33■□□□□ 0.04
SEC22C-201ENST00000264454 KIAA0586Q9BVV6 1533 aa15.33■□□□□ 0.04
SEC22C-201ENST00000264454 IQGAP2Q13576 1575 aa15.32■□□□□ 0.04
SEC22C-201ENST00000264454 CHMP7Q8WUX9 453 aaPredicted RBP15.32■□□□□ 0.04
SEC22C-201ENST00000264454 P3H3Q8IVL6 736 aa15.3■□□□□ 0.04
SEC22C-201ENST00000264454 FHOD3Q2V2M9 1422 aa15.3■□□□□ 0.04
SEC22C-201ENST00000264454 AEBP2Q6ZN18 517 aaPredicted RBP15.29■□□□□ 0.04
SEC22C-201ENST00000264454 CASKIN1Q8WXD9 1431 aa15.29■□□□□ 0.04
SEC22C-201ENST00000264454 RIMBP3CA6NJZ7 1639 aa15.29■□□□□ 0.04
SEC22C-201ENST00000264454 RIMBP3BA6NNM3 1639 aa15.29■□□□□ 0.04
SEC22C-201ENST00000264454 RIMBP3Q9UFD9 1639 aa15.29■□□□□ 0.04
SEC22C-201ENST00000264454 FYCO1Q9BQS8 1478 aa15.29■□□□□ 0.04
SEC22C-201ENST00000264454 UGGT2Q9NYU1 1516 aa15.28■□□□□ 0.04
SEC22C-201ENST00000264454 TTBK1Q5TCY1 1321 aaPredicted RBP15.27■□□□□ 0.03
SEC22C-201ENST00000264454 HRCP23327 699 aa15.26■□□□□ 0.03
SEC22C-201ENST00000264454 TIAM1Q13009 1591 aa15.25■□□□□ 0.03
SEC22C-201ENST00000264454 KANK4Q5T7N3 995 aaPredicted RBP15.24■□□□□ 0.03
SEC22C-201ENST00000264454 NUP160Q12769 1436 aa15.23■□□□□ 0.03
SEC22C-201ENST00000264454 TRHP20396 242 aaPredicted RBP15.23■□□□□ 0.03
SEC22C-201ENST00000264454 PCF11O94913 1555 aaKnown RBP15.22■□□□□ 0.03
SEC22C-201ENST00000264454 FBLN2P98095 1184 aa15.22■□□□□ 0.03
SEC22C-201ENST00000264454 ARHGEF11O15085 1522 aa15.2■□□□□ 0.02
SEC22C-201ENST00000264454 LRRC9Q6ZRR7 1453 aa15.2■□□□□ 0.02
SEC22C-201ENST00000264454 CEP170Q5SW79 1584 aa15.19■□□□□ 0.02
SEC22C-201ENST00000264454 CFAP43Q8NDM7 1665 aa15.18■□□□□ 0.02
SEC22C-201ENST00000264454 ATP1B4Q9UN42 357 aaPredicted RBP15.18■□□□□ 0.02
SEC22C-201ENST00000264454 ZEB1P37275 1124 aaPredicted RBP15.17■□□□□ 0.02
SEC22C-201ENST00000264454 CYB5RLQ6IPT4 315 aa15.16■□□□□ 0.02
SEC22C-201ENST00000264454 CARMIL2Q6F5E8 1435 aa15.16■□□□□ 0.02
SEC22C-201ENST00000264454 DISP1Q96F81 1524 aa15.16■□□□□ 0.02
SEC22C-201ENST00000264454 JPH4Q96JJ6 628 aa15.15■□□□□ 0.02
SEC22C-201ENST00000264454 RRBP1Q9P2E9 1410 aaKnown RBP15.15■□□□□ 0.02
SEC22C-201ENST00000264454 KIAA0556O60303 1618 aa15.15■□□□□ 0.02
SEC22C-201ENST00000264454 CCDC18Q5T9S5 1454 aa15.14■□□□□ 0.01
SEC22C-201ENST00000264454 HECW1Q76N89 1606 aa15.12■□□□□ 0.01
SEC22C-201ENST00000264454 CCNB3Q8WWL7 1395 aa15.09■□□□□ 0.01
SEC22C-201ENST00000264454 MTUS2Q5JR59 1369 aa15.08■□□□□ 0
SEC22C-201ENST00000264454 EPRSP07814 1512 aaKnown RBP15.06■□□□□ 0
SEC22C-201ENST00000264454 CHD1O14646 1710 aa15.05■□□□□ -0
SEC22C-201ENST00000264454 HNRNPUL2Q1KMD3 747 aaKnown RBP15.04■□□□□ -0
SEC22C-201ENST00000264454 EHBP1L1Q8N3D4 1523 aa15.04■□□□□ -0
SEC22C-201ENST00000264454 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.04■□□□□ -0
SEC22C-201ENST00000264454 PHLDB1Q86UU1 1377 aa15.03■□□□□ -0
SEC22C-201ENST00000264454 RAPGEF6Q8TEU7 1601 aa15.02■□□□□ -0
SEC22C-201ENST00000264454 CDK11AQ9UQ88 783 aaPredicted RBP15.02■□□□□ -0
SEC22C-201ENST00000264454 LRRIQ1Q96JM4 1722 aa15.02□□□□□ -0.01
SEC22C-201ENST00000264454 CCER1Q8TC90 406 aaPredicted RBP15.01□□□□□ -0.01
SEC22C-201ENST00000264454 PRG4Q92954 1404 aaPredicted RBP15□□□□□ -0.01
SEC22C-201ENST00000264454 SUPT6HQ7KZ85 1726 aaKnown RBP14.99□□□□□ -0.01
SEC22C-201ENST00000264454 NUP153P49790 1475 aaKnown RBP14.99□□□□□ -0.01
SEC22C-201ENST00000264454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.98□□□□□ -0.01
SEC22C-201ENST00000264454 SHROOM2Q13796 1616 aa14.98□□□□□ -0.01
SEC22C-201ENST00000264454 NCOA2Q15596 1464 aa14.97□□□□□ -0.01
SEC22C-201ENST00000264454 PTPRGP23470 1445 aa14.96□□□□□ -0.01
SEC22C-201ENST00000264454 MYOM3Q5VTT5 1437 aa14.95□□□□□ -0.02
SEC22C-201ENST00000264454 FGD6Q6ZV73 1430 aa14.95□□□□□ -0.02
SEC22C-201ENST00000264454 CDK13Q14004 1512 aaKnown RBP14.95□□□□□ -0.02
SEC22C-201ENST00000264454 PLB1Q6P1J6 1458 aa14.94□□□□□ -0.02
SEC22C-201ENST00000264454 ABCA8O94911 1581 aa14.94□□□□□ -0.02
SEC22C-201ENST00000264454 MAGI3Q5TCQ9 1506 aa14.93□□□□□ -0.02
SEC22C-201ENST00000264454 CLASP1Q7Z460 1538 aa14.93□□□□□ -0.02
SEC22C-201ENST00000264454 FAM50AQ14320 339 aaKnown RBP14.93□□□□□ -0.02
SEC22C-201ENST00000264454 MIA2Q96PC5 1412 aa14.91□□□□□ -0.02
SEC22C-201ENST00000264454 TROQ12816 1431 aaPredicted RBP14.89□□□□□ -0.03
SEC22C-201ENST00000264454 CLSPNQ9HAW4 1339 aa14.87□□□□□ -0.03
SEC22C-201ENST00000264454 PLEKHD1A6NEE1 506 aa14.87□□□□□ -0.03
SEC22C-201ENST00000264454 UACAQ9BZF9 1416 aa14.87□□□□□ -0.03
SEC22C-201ENST00000264454 ITGAEP38570 1179 aa14.86□□□□□ -0.03
SEC22C-201ENST00000264454 ATP10BO94823 1461 aa14.86□□□□□ -0.03
SEC22C-201ENST00000264454 TCOF1Q13428 1488 aaKnown RBP14.86□□□□□ -0.03
SEC22C-201ENST00000264454 ARID3CA6NKF2 412 aa14.85□□□□□ -0.03
SEC22C-201ENST00000264454 SETD5Q9C0A6 1442 aa14.84□□□□□ -0.03
SEC22C-201ENST00000264454 PTPN23Q9H3S7 1636 aa14.83□□□□□ -0.03
SEC22C-201ENST00000264454 ADCY10Q96PN6 1610 aa14.82□□□□□ -0.04
SEC22C-201ENST00000264454 UHRF1BP1LA0JNW5 1464 aa14.8□□□□□ -0.04
SEC22C-201ENST00000264454 ABCC2Q92887 1545 aa14.8□□□□□ -0.04
SEC22C-201ENST00000264454 RAB3GAP2Q9H2M9 1393 aa14.79□□□□□ -0.04
SEC22C-201ENST00000264454 ERCC6L2Q5T890 1561 aa14.79□□□□□ -0.04
SEC22C-201ENST00000264454 DHX57Q6P158 1386 aaKnown RBP14.78□□□□□ -0.04
SEC22C-201ENST00000264454 ACIN1Q9UKV3 1341 aaKnown RBP14.78□□□□□ -0.04
SEC22C-201ENST00000264454 ITSN2Q9NZM3 1697 aa14.77□□□□□ -0.05
SEC22C-201ENST00000264454 KIF14Q15058 1648 aa14.76□□□□□ -0.05
SEC22C-201ENST00000264454 CFDP1Q9UEE9 299 aaPredicted RBP14.75□□□□□ -0.05
SEC22C-201ENST00000264454 HFM1A2PYH4 1435 aa14.75□□□□□ -0.05
SEC22C-201ENST00000264454 GPATCH8Q9UKJ3 1502 aaKnown RBP14.75□□□□□ -0.05
SEC22C-201ENST00000264454 AKNAQ7Z591 1439 aa14.74□□□□□ -0.05
SEC22C-201ENST00000264454 ABCC10Q5T3U5 1492 aa14.73□□□□□ -0.05
SEC22C-201ENST00000264454 PTPRKQ15262 1439 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms