RNA–Protein interactions for RNA: ENST00000264454.7

SEC22C-201, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22C, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-201ENST00000264454 NISCHQ9Y2I1 1504 aa22.37■■□□□ 1.17
SEC22C-201ENST00000264454 CCDC180Q9P1Z9 1646 aa19.48■□□□□ 0.71
SEC22C-201ENST00000264454 ZCCHC6Q5VYS8 1495 aaKnown RBP18.8■□□□□ 0.6
SEC22C-201ENST00000264454 ABCC9O60706 1549 aa18.59■□□□□ 0.57
SEC22C-201ENST00000264454 DCAF1Q9Y4B6 1507 aa18.57■□□□□ 0.56
SEC22C-201ENST00000264454 DCAF8L2P0C7V8 631 aa18.42■□□□□ 0.54
SEC22C-201ENST00000264454 MYO15BQ96JP2 1530 aa18.34■□□□□ 0.53
SEC22C-201ENST00000264454 SHROOM4Q9ULL8 1493 aa18.2■□□□□ 0.5
SEC22C-201ENST00000264454 NACADO15069 1562 aa18.16■□□□□ 0.5
SEC22C-201ENST00000264454 DNAJC5BQ9UF47 199 aa18.02■□□□□ 0.47
SEC22C-201ENST00000264454 RB1CC1Q8TDY2 1594 aa17.96■□□□□ 0.47
SEC22C-201ENST00000264454 SCRIBQ14160 1630 aa17.83■□□□□ 0.45
SEC22C-201ENST00000264454 SUPT5HO00267 1087 aaKnown RBP17.62■□□□□ 0.41
SEC22C-201ENST00000264454 UNC13AQ9UPW8 1703 aa17.48■□□□□ 0.39
SEC22C-201ENST00000264454 RSF1Q96T23 1441 aaPredicted RBP17.38■□□□□ 0.37
SEC22C-201ENST00000264454 BICRAQ9NZM4 1560 aa17.35■□□□□ 0.37
SEC22C-201ENST00000264454 CECR2Q9BXF3 1484 aa17.31■□□□□ 0.36
SEC22C-201ENST00000264454 BAZ1AQ9NRL2 1556 aaPredicted RBP17.29■□□□□ 0.36
SEC22C-201ENST00000264454 PABPN1Q86U42 306 aaKnown RBP eCLIP17.26■□□□□ 0.35
SEC22C-201ENST00000264454 MROH2BQ7Z745 1585 aa17.23■□□□□ 0.35
SEC22C-201ENST00000264454 SMARCA4P51532 1647 aa17.15■□□□□ 0.34
SEC22C-201ENST00000264454 DNAJC5Q9H3Z4 198 aa17.08■□□□□ 0.32
SEC22C-201ENST00000264454 WIZO95785 1651 aa17.07■□□□□ 0.32
SEC22C-201ENST00000264454 PEG3Q9GZU2 1588 aa16.99■□□□□ 0.31
SEC22C-201ENST00000264454 TOP2AP11388 1531 aaKnown RBP16.97■□□□□ 0.31
SEC22C-201ENST00000264454 CHIC1Q5VXU3 224 aa16.95■□□□□ 0.3
SEC22C-201ENST00000264454 SMARCA2P51531 1590 aa16.9■□□□□ 0.3
SEC22C-201ENST00000264454 ATAD2BQ9ULI0 1458 aa16.88■□□□□ 0.29
SEC22C-201ENST00000264454 EIF4G1Q04637 1599 aaKnown RBP16.84■□□□□ 0.29
SEC22C-201ENST00000264454 CCDC88BA6NC98 1476 aa16.79■□□□□ 0.28
SEC22C-201ENST00000264454 BAZ1BQ9UIG0 1483 aaKnown RBP16.79■□□□□ 0.28
SEC22C-201ENST00000264454 NCAPD3P42695 1498 aa16.76■□□□□ 0.27
SEC22C-201ENST00000264454 CC2D2AQ9P2K1 1620 aa16.74■□□□□ 0.27
SEC22C-201ENST00000264454 HMGXB3Q12766 1538 aa16.72■□□□□ 0.27
SEC22C-201ENST00000264454 TRIM41Q8WV44 630 aa16.63■□□□□ 0.25
SEC22C-201ENST00000264454 CFTRP13569 1480 aa16.39■□□□□ 0.21
SEC22C-201ENST00000264454 ABCC8Q09428 1581 aa16.39■□□□□ 0.21
SEC22C-201ENST00000264454 WRNQ14191 1432 aaPredicted RBP eCLIP16.37■□□□□ 0.21
SEC22C-201ENST00000264454 CADPSQ9ULU8 1353 aa16.33■□□□□ 0.2
SEC22C-201ENST00000264454 CUX2O14529 1486 aa16.33■□□□□ 0.2
SEC22C-201ENST00000264454 EEA1Q15075 1411 aa16.26■□□□□ 0.19
SEC22C-201ENST00000264454 PRDM2Q13029 1718 aa16.25■□□□□ 0.19
SEC22C-201ENST00000264454 LOC105371045A0A1W2PR82 267 aa16.25■□□□□ 0.19
SEC22C-201ENST00000264454 FAM9AQ8IZU1 332 aaPredicted RBP16.23■□□□□ 0.19
SEC22C-201ENST00000264454 SYNJ1O43426 1573 aa16.22■□□□□ 0.19
SEC22C-201ENST00000264454 TOP2BQ02880 1626 aa16.22■□□□□ 0.19
SEC22C-201ENST00000264454 BIVM-ERCC5R4GMW8 1640 aa16.19■□□□□ 0.18
SEC22C-201ENST00000264454 LAMC3Q9Y6N6 1575 aa16.16■□□□□ 0.18
SEC22C-201ENST00000264454 SOGA1O94964 1423 aa16.15■□□□□ 0.18
SEC22C-201ENST00000264454 ERCC6Q03468 1493 aa16.14■□□□□ 0.17
SEC22C-201ENST00000264454 CSRNP3Q8WYN3 585 aa16.13■□□□□ 0.17
SEC22C-201ENST00000264454 CUX1P39880 1505 aa16.12■□□□□ 0.17
SEC22C-201ENST00000264454 FANCD2Q9BXW9 1451 aa16.11■□□□□ 0.17
SEC22C-201ENST00000264454 PDS5BQ9NTI5 1447 aa16.07■□□□□ 0.16
SEC22C-201ENST00000264454 NESP48681 1621 aa16.05■□□□□ 0.16
SEC22C-201ENST00000264454 RUSC2Q8N2Y8 1516 aa16.04■□□□□ 0.16
SEC22C-201ENST00000264454 CEP164Q9UPV0 1460 aa16.01■□□□□ 0.15
SEC22C-201ENST00000264454 DNMBPQ6XZF7 1577 aa15.99■□□□□ 0.15
SEC22C-201ENST00000264454 KIF27Q86VH2 1401 aa15.98■□□□□ 0.15
SEC22C-201ENST00000264454 TNIKQ9UKE5 1360 aa15.97■□□□□ 0.15
SEC22C-201ENST00000264454 GOLGA3Q08378 1498 aa15.97■□□□□ 0.15
SEC22C-201ENST00000264454 KIF21BO75037 1637 aa15.96■□□□□ 0.14
SEC22C-201ENST00000264454 FGD5Q6ZNL6 1462 aa15.94■□□□□ 0.14
SEC22C-201ENST00000264454 TOPBP1Q92547 1522 aa15.94■□□□□ 0.14
SEC22C-201ENST00000264454 EHMT2Q96KQ7 1210 aa15.93■□□□□ 0.14
SEC22C-201ENST00000264454 UBTFP17480 764 aaKnown RBP15.9■□□□□ 0.14
SEC22C-201ENST00000264454 URB2Q14146 1524 aaKnown RBP15.88■□□□□ 0.13
SEC22C-201ENST00000264454 PRXQ9BXM0 1461 aa15.87■□□□□ 0.13
SEC22C-201ENST00000264454 POLA1P09884 1462 aaPredicted RBP15.86■□□□□ 0.13
SEC22C-201ENST00000264454 ERICH3Q5RHP9 1530 aa15.86■□□□□ 0.13
SEC22C-201ENST00000264454 ABCA10Q8WWZ4 1543 aa15.85■□□□□ 0.13
SEC22C-201ENST00000264454 KIF21AQ7Z4S6 1674 aa15.85■□□□□ 0.13
SEC22C-201ENST00000264454 CEP162Q5TB80 1403 aa15.82■□□□□ 0.12
SEC22C-201ENST00000264454 RAPGEF2Q9Y4G8 1499 aa15.81■□□□□ 0.12
SEC22C-201ENST00000264454 IGF1RP08069 1367 aa15.81■□□□□ 0.12
SEC22C-201ENST00000264454 MRC2Q9UBG0 1479 aa15.81■□□□□ 0.12
SEC22C-201ENST00000264454 RAD54L2Q9Y4B4 1467 aa15.78■□□□□ 0.12
SEC22C-201ENST00000264454 CARMIL1Q5VZK9 1371 aa15.74■□□□□ 0.11
SEC22C-201ENST00000264454 THOC2Q8NI27 1593 aaKnown RBP15.73■□□□□ 0.11
SEC22C-201ENST00000264454 WDR97A6NE52 1622 aa15.72■□□□□ 0.11
SEC22C-201ENST00000264454 WDR62O43379 1518 aa15.71■□□□□ 0.1
SEC22C-201ENST00000264454 CLIP1P30622 1438 aa15.71■□□□□ 0.1
SEC22C-201ENST00000264454 TRIM26Q12899 539 aaPredicted RBP15.68■□□□□ 0.1
SEC22C-201ENST00000264454 TARBP1Q13395 1621 aaKnown RBP15.68■□□□□ 0.1
SEC22C-201ENST00000264454 GAPVD1Q14C86 1478 aa15.67■□□□□ 0.1
SEC22C-201ENST00000264454 CUL7Q14999 1698 aa15.67■□□□□ 0.1
SEC22C-201ENST00000264454 ABCA5Q8WWZ7 1642 aa15.66■□□□□ 0.1
SEC22C-201ENST00000264454 IFT140Q96RY7 1462 aa15.65■□□□□ 0.1
SEC22C-201ENST00000264454 TDRD9Q8NDG6 1382 aaKnown RBP15.65■□□□□ 0.1
SEC22C-201ENST00000264454 PCGF6Q9BYE7 350 aa15.61■□□□□ 0.09
SEC22C-201ENST00000264454 VPS8Q8N3P4 1428 aa15.59■□□□□ 0.09
SEC22C-201ENST00000264454 GRIN2BQ13224 1484 aa15.55■□□□□ 0.08
SEC22C-201ENST00000264454 FHAD1B1AJZ9 1412 aa15.53■□□□□ 0.08
SEC22C-201ENST00000264454 AQRO60306 1485 aaKnown RBP eCLIP15.53■□□□□ 0.081e-6■■■■■ 30.6
SEC22C-201ENST00000264454 RANGAP1P46060 587 aaPredicted RBP15.51■□□□□ 0.07
SEC22C-201ENST00000264454 APLP2Q06481 763 aa15.51■□□□□ 0.07
SEC22C-201ENST00000264454 PBRM1Q86U86 1689 aa15.51■□□□□ 0.07
SEC22C-201ENST00000264454 ARHGAP35Q9NRY4 1499 aa15.5■□□□□ 0.07
SEC22C-201ENST00000264454 OSCARQ8IYS5 282 aa15.49■□□□□ 0.07
SEC22C-201ENST00000264454 ARAP1Q96P48 1450 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms