RNA–Protein interactions for RNA: ENST00000263735.8

EPCAM-201, Transcript of epithelial cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPCAM, Length 1,724 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-201ENST00000263735 RANGAP1P46060 587 aaPredicted RBP37.7■■■■□ 3.63
EPCAM-201ENST00000263735 EFCAB5A4FU69 1503 aa37.69■■■■□ 3.62
EPCAM-201ENST00000263735 ARAP1Q96P48 1450 aa37.69■■■■□ 3.62
EPCAM-201ENST00000263735 VPS8Q8N3P4 1428 aa37.67■■■■□ 3.62
EPCAM-201ENST00000263735 IQGAP2Q13576 1575 aa37.66■■■■□ 3.62
EPCAM-201ENST00000263735 CHD1O14646 1710 aa37.6■■■■□ 3.61
EPCAM-201ENST00000263735 SAMD9Q5K651 1589 aa37.59■■■■□ 3.61
EPCAM-201ENST00000263735 CHMP7Q8WUX9 453 aaPredicted RBP37.57■■■■□ 3.6
EPCAM-201ENST00000263735 CEP170Q5SW79 1584 aa37.56■■■■□ 3.6
EPCAM-201ENST00000263735 KIAA0586Q9BVV6 1533 aa37.54■■■■□ 3.6
EPCAM-201ENST00000263735 NUP160Q12769 1436 aa37.49■■■■□ 3.59
EPCAM-201ENST00000263735 UGGT2Q9NYU1 1516 aa37.45■■■■□ 3.59
EPCAM-201ENST00000263735 FBLN2P98095 1184 aa37.44■■■■□ 3.58
EPCAM-201ENST00000263735 FHOD3Q2V2M9 1422 aa37.35■■■■□ 3.57
EPCAM-201ENST00000263735 KIAA0556O60303 1618 aa37.28■■■■□ 3.56
EPCAM-201ENST00000263735 PCF11O94913 1555 aaKnown RBP37.28■■■■□ 3.56
EPCAM-201ENST00000263735 FMN1Q68DA7 1419 aa37.27■■■■□ 3.56
EPCAM-201ENST00000263735 P3H3Q8IVL6 736 aa37.26■■■■□ 3.56
EPCAM-201ENST00000263735 DISP1Q96F81 1524 aa37.21■■■■□ 3.55
EPCAM-201ENST00000263735 APLP2Q06481 763 aa37.19■■■■□ 3.54
EPCAM-201ENST00000263735 FYCO1Q9BQS8 1478 aa37.19■■■■□ 3.54
EPCAM-201ENST00000263735 CFAP43Q8NDM7 1665 aa37.14■■■■□ 3.54
EPCAM-201ENST00000263735 CASKIN1Q8WXD9 1431 aa37.14■■■■□ 3.54
EPCAM-201ENST00000263735 MAP3K1Q13233 1512 aa37.14■■■■□ 3.54
EPCAM-201ENST00000263735 SHROOM2Q13796 1616 aa37.13■■■■□ 3.53
EPCAM-201ENST00000263735 TRIM26Q12899 539 aaPredicted RBP37.1■■■■□ 3.53
EPCAM-201ENST00000263735 PPARGC1BQ86YN6 1023 aaKnown RBP37.1■■■■□ 3.53
EPCAM-201ENST00000263735 TIAM1Q13009 1591 aa37.1■■■■□ 3.53
EPCAM-201ENST00000263735 JPH4Q96JJ6 628 aa37.07■■■■□ 3.52
EPCAM-201ENST00000263735 CLASP1Q7Z460 1538 aa37.07■■■■□ 3.52
EPCAM-201ENST00000263735 LRRIQ1Q96JM4 1722 aa37.06■■■■□ 3.52
EPCAM-201ENST00000263735 CARMIL2Q6F5E8 1435 aa37.06■■■■□ 3.52
EPCAM-201ENST00000263735 HECW1Q76N89 1606 aa37■■■■□ 3.51
EPCAM-201ENST00000263735 PCGF6Q9BYE7 350 aa36.94■■■■□ 3.5
EPCAM-201ENST00000263735 RAPGEF6Q8TEU7 1601 aa36.92■■■■□ 3.5
EPCAM-201ENST00000263735 PRG4Q92954 1404 aaPredicted RBP36.9■■■■□ 3.5
EPCAM-201ENST00000263735 TTBK1Q5TCY1 1321 aaPredicted RBP36.88■■■■□ 3.49
EPCAM-201ENST00000263735 CCDC18Q5T9S5 1454 aa36.87■■■■□ 3.49
EPCAM-201ENST00000263735 LRRC9Q6ZRR7 1453 aa36.85■■■■□ 3.49
EPCAM-201ENST00000263735 ATP1B4Q9UN42 357 aaPredicted RBP36.84■■■■□ 3.49
EPCAM-201ENST00000263735 KANK4Q5T7N3 995 aaPredicted RBP36.82■■■■□ 3.49
EPCAM-201ENST00000263735 EPRSP07814 1512 aaKnown RBP36.76■■■■□ 3.47
EPCAM-201ENST00000263735 ABCA8O94911 1581 aa36.73■■■■□ 3.47
EPCAM-201ENST00000263735 ERCC6L2Q5T890 1561 aa36.73■■■■□ 3.47
EPCAM-201ENST00000263735 NUP153P49790 1475 aaKnown RBP36.71■■■■□ 3.47
EPCAM-201ENST00000263735 PLB1Q6P1J6 1458 aa36.69■■■■□ 3.46
EPCAM-201ENST00000263735 EHBP1L1Q8N3D4 1523 aa36.67■■■■□ 3.46
EPCAM-201ENST00000263735 CDK13Q14004 1512 aaKnown RBP36.65■■■■□ 3.46
EPCAM-201ENST00000263735 PTPRGP23470 1445 aa36.64■■■■□ 3.46
EPCAM-201ENST00000263735 SUPT6HQ7KZ85 1726 aaKnown RBP36.62■■■■□ 3.45
EPCAM-201ENST00000263735 OSCARQ8IYS5 282 aa36.62■■■■□ 3.45
EPCAM-201ENST00000263735 MTUS2Q5JR59 1369 aa36.59■■■■□ 3.45
EPCAM-201ENST00000263735 MAGI3Q5TCQ9 1506 aa36.58■■■■□ 3.45
EPCAM-201ENST00000263735 RRBP1Q9P2E9 1410 aaKnown RBP36.51■■■■□ 3.44
EPCAM-201ENST00000263735 UACAQ9BZF9 1416 aa36.47■■■■□ 3.43
EPCAM-201ENST00000263735 ABCC2Q92887 1545 aa36.45■■■■□ 3.43
EPCAM-201ENST00000263735 ARHGEF11O15085 1522 aa36.44■■■■□ 3.42
EPCAM-201ENST00000263735 PHLDB1Q86UU1 1377 aa36.43■■■■□ 3.42
EPCAM-201ENST00000263735 NCOA2Q15596 1464 aa36.42■■■■□ 3.42
EPCAM-201ENST00000263735 ADCY10Q96PN6 1610 aa36.4■■■■□ 3.42
EPCAM-201ENST00000263735 ARID3CA6NKF2 412 aa36.39■■■■□ 3.42
EPCAM-201ENST00000263735 CDK11AQ9UQ88 783 aaPredicted RBP36.39■■■■□ 3.42
EPCAM-201ENST00000263735 ATP10BO94823 1461 aa36.39■■■■□ 3.42
EPCAM-201ENST00000263735 UHRF1BP1LA0JNW5 1464 aa36.37■■■■□ 3.41
EPCAM-201ENST00000263735 CCNB3Q8WWL7 1395 aa36.36■■■■□ 3.41
EPCAM-201ENST00000263735 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.33■■■■□ 3.41
EPCAM-201ENST00000263735 HNRNPUL2Q1KMD3 747 aaKnown RBP36.33■■■■□ 3.41
EPCAM-201ENST00000263735 TROQ12816 1431 aaPredicted RBP36.33■■■■□ 3.41
EPCAM-201ENST00000263735 MYOM3Q5VTT5 1437 aa36.28■■■■□ 3.4
EPCAM-201ENST00000263735 ZCCHC11Q5TAX3 1644 aaKnown RBP36.26■■■■□ 3.4
EPCAM-201ENST00000263735 FGD6Q6ZV73 1430 aa36.25■■■■□ 3.39
EPCAM-201ENST00000263735 KIF14Q15058 1648 aa36.23■■■■□ 3.39
EPCAM-201ENST00000263735 ITSN2Q9NZM3 1697 aa36.22■■■■□ 3.39
EPCAM-201ENST00000263735 KDM5BQ9UGL1 1544 aa36.21■■■■□ 3.39
EPCAM-201ENST00000263735 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.19■■■■□ 3.38
EPCAM-201ENST00000263735 PTPN23Q9H3S7 1636 aa36.18■■■■□ 3.38
EPCAM-201ENST00000263735 PLEKHD1A6NEE1 506 aa36.16■■■■□ 3.38
EPCAM-201ENST00000263735 MIA2Q96PC5 1412 aa36.12■■■■□ 3.37
EPCAM-201ENST00000263735 CDC42BPAQ5VT25 1732 aa36.1■■■■□ 3.37
EPCAM-201ENST00000263735 TCOF1Q13428 1488 aaKnown RBP36.07■■■■□ 3.37
EPCAM-201ENST00000263735 ABCC10Q5T3U5 1492 aa36.04■■■■□ 3.36
EPCAM-201ENST00000263735 FAM50AQ14320 339 aaKnown RBP36.04■■■■□ 3.36
EPCAM-201ENST00000263735 RIMBP3CA6NJZ7 1639 aa36.04■■■■□ 3.36
EPCAM-201ENST00000263735 RIMBP3BA6NNM3 1639 aa36.04■■■■□ 3.36
EPCAM-201ENST00000263735 RIMBP3Q9UFD9 1639 aa36.04■■■■□ 3.36
EPCAM-201ENST00000263735 GPATCH8Q9UKJ3 1502 aaKnown RBP35.97■■■■□ 3.35
EPCAM-201ENST00000263735 PREX2Q70Z35 1606 aa35.95■■■■□ 3.35
EPCAM-201ENST00000263735 MYO5CQ9NQX4 1742 aa35.94■■■■□ 3.34
EPCAM-201ENST00000263735 CDC42BPBQ9Y5S2 1711 aa35.92■■■■□ 3.34
EPCAM-201ENST00000263735 TTC37Q6PGP7 1564 aa35.92■■■■□ 3.34
EPCAM-201ENST00000263735 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.91■■■■□ 3.345e-7■□□□□ 8.9
EPCAM-201ENST00000263735 ITGAEP38570 1179 aa35.88■■■■□ 3.33
EPCAM-201ENST00000263735 WDR7Q9Y4E6 1490 aa35.86■■■■□ 3.33
EPCAM-201ENST00000263735 DNMT1P26358 1616 aaKnown RBP35.85■■■■□ 3.33
EPCAM-201ENST00000263735 CAMSAP2Q08AD1 1489 aa35.83■■■■□ 3.33
EPCAM-201ENST00000263735 CFDP1Q9UEE9 299 aaPredicted RBP35.81■■■■□ 3.32
EPCAM-201ENST00000263735 CROCC2H7BZ55 1655 aa35.78■■■■□ 3.32
EPCAM-201ENST00000263735 ASXL2Q76L83 1435 aa35.76■■■■□ 3.31
EPCAM-201ENST00000263735 NPM1P06748 294 aaKnown RBP eCLIP35.75■■■■□ 3.31
EPCAM-201ENST00000263735 ABCA9Q8IUA7 1624 aa35.74■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms