RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 CLASP1Q7Z460 1538 aa20.56■□□□□ 0.88
CLNS1A-201ENST00000263309 RAPGEF2Q9Y4G8 1499 aa20.56■□□□□ 0.88
CLNS1A-201ENST00000263309 RUSC2Q8N2Y8 1516 aa20.52■□□□□ 0.87
CLNS1A-201ENST00000263309 JPH4Q96JJ6 628 aa20.47■□□□□ 0.87
CLNS1A-201ENST00000263309 NUP160Q12769 1436 aa20.46■□□□□ 0.87
CLNS1A-201ENST00000263309 UBTFP17480 764 aaKnown RBP20.43■□□□□ 0.86
CLNS1A-201ENST00000263309 KIAA0586Q9BVV6 1533 aa20.43■□□□□ 0.86
CLNS1A-201ENST00000263309 PRXQ9BXM0 1461 aa20.39■□□□□ 0.85
CLNS1A-201ENST00000263309 CARMIL2Q6F5E8 1435 aa20.38■□□□□ 0.85
CLNS1A-201ENST00000263309 CEP170Q5SW79 1584 aa20.36■□□□□ 0.85
CLNS1A-201ENST00000263309 PRG4Q92954 1404 aaPredicted RBP20.33■□□□□ 0.84
CLNS1A-201ENST00000263309 EHMT2Q96KQ7 1210 aa20.32■□□□□ 0.84
CLNS1A-201ENST00000263309 NPM1P06748 294 aaKnown RBP eCLIP20.28■□□□□ 0.84
CLNS1A-201ENST00000263309 GOLGA3Q08378 1498 aa20.28■□□□□ 0.84
CLNS1A-201ENST00000263309 IQGAP2Q13576 1575 aa20.28■□□□□ 0.84
CLNS1A-201ENST00000263309 KIF21BO75037 1637 aa20.25■□□□□ 0.83
CLNS1A-201ENST00000263309 RANGAP1P46060 587 aaPredicted RBP20.24■□□□□ 0.83
CLNS1A-201ENST00000263309 TTBK1Q5TCY1 1321 aaPredicted RBP20.24■□□□□ 0.83
CLNS1A-201ENST00000263309 ERCC6L2Q5T890 1561 aa20.21■□□□□ 0.83
CLNS1A-201ENST00000263309 TNIKQ9UKE5 1360 aa20.2■□□□□ 0.82
CLNS1A-201ENST00000263309 PTPRGP23470 1445 aa20.19■□□□□ 0.82
CLNS1A-201ENST00000263309 SHROOM2Q13796 1616 aa20.19■□□□□ 0.82
CLNS1A-201ENST00000263309 CTTNBP2Q8WZ74 1663 aa20.16■□□□□ 0.82
CLNS1A-201ENST00000263309 UGGT2Q9NYU1 1516 aa20.14■□□□□ 0.81
CLNS1A-201ENST00000263309 P3H3Q8IVL6 736 aa20.12■□□□□ 0.81
CLNS1A-201ENST00000263309 DISP1Q96F81 1524 aa20.03■□□□□ 0.8
CLNS1A-201ENST00000263309 EFCAB5A4FU69 1503 aa20.02■□□□□ 0.79
CLNS1A-201ENST00000263309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.01■□□□□ 0.79
CLNS1A-201ENST00000263309 HNRNPUL2Q1KMD3 747 aaKnown RBP20.01■□□□□ 0.79
CLNS1A-201ENST00000263309 KIAA0556O60303 1618 aa20.01■□□□□ 0.79
CLNS1A-201ENST00000263309 ATP1B4Q9UN42 357 aaPredicted RBP20■□□□□ 0.79
CLNS1A-201ENST00000263309 UACAQ9BZF9 1416 aa20■□□□□ 0.79
CLNS1A-201ENST00000263309 LOC105371045A0A1W2PR82 267 aa19.97■□□□□ 0.79
CLNS1A-201ENST00000263309 FMN1Q68DA7 1419 aa19.95■□□□□ 0.78
CLNS1A-201ENST00000263309 CLIP1P30622 1438 aa19.93■□□□□ 0.78
CLNS1A-201ENST00000263309 CDK11AQ9UQ88 783 aaPredicted RBP19.92■□□□□ 0.78
CLNS1A-201ENST00000263309 UHRF1BP1LA0JNW5 1464 aa19.91■□□□□ 0.78
CLNS1A-201ENST00000263309 KIF13AQ9H1H9 1805 aa19.9■□□□□ 0.78
CLNS1A-201ENST00000263309 SAMD9Q5K651 1589 aa19.9■□□□□ 0.78
CLNS1A-201ENST00000263309 FHOD3Q2V2M9 1422 aa19.89■□□□□ 0.77
CLNS1A-201ENST00000263309 ABCC10Q5T3U5 1492 aa19.87■□□□□ 0.77
CLNS1A-201ENST00000263309 ABCC2Q92887 1545 aa19.86■□□□□ 0.77
CLNS1A-201ENST00000263309 PLEKHD1A6NEE1 506 aa19.86■□□□□ 0.77
CLNS1A-201ENST00000263309 FAM69CQ0P6D2 419 aa19.84■□□□□ 0.77
CLNS1A-201ENST00000263309 MAPKBP1O60336 1514 aa19.84■□□□□ 0.77
CLNS1A-201ENST00000263309 ARHGAP35Q9NRY4 1499 aa19.84■□□□□ 0.77
CLNS1A-201ENST00000263309 APLP2Q06481 763 aa19.83■□□□□ 0.77
CLNS1A-201ENST00000263309 PLB1Q6P1J6 1458 aa19.83■□□□□ 0.76
CLNS1A-201ENST00000263309 CEP162Q5TB80 1403 aa19.82■□□□□ 0.76
CLNS1A-201ENST00000263309 ARID3CA6NKF2 412 aa19.8■□□□□ 0.76
CLNS1A-201ENST00000263309 DIP2BQ9P265 1576 aa19.78■□□□□ 0.76
CLNS1A-201ENST00000263309 ADCY10Q96PN6 1610 aa19.78■□□□□ 0.76
CLNS1A-201ENST00000263309 KDM5BQ9UGL1 1544 aa19.77■□□□□ 0.76
CLNS1A-201ENST00000263309 KCNH8Q96L42 1107 aa19.77■□□□□ 0.76
CLNS1A-201ENST00000263309 ABCA8O94911 1581 aa19.77■□□□□ 0.76
CLNS1A-201ENST00000263309 RAPGEF6Q8TEU7 1601 aa19.76■□□□□ 0.75
CLNS1A-201ENST00000263309 ASXL2Q76L83 1435 aa19.73■□□□□ 0.75
CLNS1A-201ENST00000263309 CASKIN1Q8WXD9 1431 aa19.7■□□□□ 0.74
CLNS1A-201ENST00000263309 HECW1Q76N89 1606 aa19.69■□□□□ 0.74
CLNS1A-201ENST00000263309 ATP10BO94823 1461 aa19.69■□□□□ 0.74
CLNS1A-201ENST00000263309 KDM4FA0A1W2PPD8 638 aa19.69■□□□□ 0.74
CLNS1A-201ENST00000263309 CCDC18Q5T9S5 1454 aa19.67■□□□□ 0.74
CLNS1A-201ENST00000263309 WDR7Q9Y4E6 1490 aa19.67■□□□□ 0.74
CLNS1A-201ENST00000263309 ZCCHC11Q5TAX3 1644 aaKnown RBP19.66■□□□□ 0.74
CLNS1A-201ENST00000263309 NUP153P49790 1475 aaKnown RBP19.66■□□□□ 0.74
CLNS1A-201ENST00000263309 FYCO1Q9BQS8 1478 aa19.65■□□□□ 0.74
CLNS1A-201ENST00000263309 KDM6BO15054 1643 aa19.65■□□□□ 0.74
CLNS1A-201ENST00000263309 EPRSP07814 1512 aaKnown RBP19.61■□□□□ 0.73
CLNS1A-201ENST00000263309 VPS8Q8N3P4 1428 aa19.6■□□□□ 0.73
CLNS1A-201ENST00000263309 MTUS2Q5JR59 1369 aa19.57■□□□□ 0.72
CLNS1A-201ENST00000263309 CD109Q6YHK3 1445 aa19.55■□□□□ 0.72
CLNS1A-201ENST00000263309 TEX14Q8IWB6 1497 aa19.54■□□□□ 0.72
CLNS1A-201ENST00000263309 GLI2P10070 1586 aa19.54■□□□□ 0.72
CLNS1A-201ENST00000263309 TSPOAP1O95153 1857 aa19.52■□□□□ 0.72
CLNS1A-201ENST00000263309 PCF11O94913 1555 aaKnown RBP19.52■□□□□ 0.71
CLNS1A-201ENST00000263309 CDK13Q14004 1512 aaKnown RBP19.51■□□□□ 0.71
CLNS1A-201ENST00000263309 TROQ12816 1431 aaPredicted RBP19.51■□□□□ 0.71
CLNS1A-201ENST00000263309 PHLDB1Q86UU1 1377 aa19.5■□□□□ 0.71
CLNS1A-201ENST00000263309 EFCAB2Q5VUJ9 269 aa19.48■□□□□ 0.71
CLNS1A-201ENST00000263309 PPRC1Q5VV67 1664 aaKnown RBP19.47■□□□□ 0.71
CLNS1A-201ENST00000263309 COL17A1Q9UMD9 1497 aaPredicted RBP19.46■□□□□ 0.71
CLNS1A-201ENST00000263309 KIF14Q15058 1648 aa19.43■□□□□ 0.7
CLNS1A-201ENST00000263309 CFAP43Q8NDM7 1665 aa19.43■□□□□ 0.7
CLNS1A-201ENST00000263309 CCNB3Q8WWL7 1395 aa19.42■□□□□ 0.7
CLNS1A-201ENST00000263309 MAGI3Q5TCQ9 1506 aa19.41■□□□□ 0.7
CLNS1A-201ENST00000263309 ADGRL1O94910 1474 aa19.41■□□□□ 0.7
CLNS1A-201ENST00000263309 MAP3K1Q13233 1512 aa19.41■□□□□ 0.7
CLNS1A-201ENST00000263309 CFDP1Q9UEE9 299 aaPredicted RBP19.39■□□□□ 0.69
CLNS1A-201ENST00000263309 ABCA9Q8IUA7 1624 aa19.38■□□□□ 0.69
CLNS1A-201ENST00000263309 MAP3K4Q9Y6R4 1608 aa19.37■□□□□ 0.69
CLNS1A-201ENST00000263309 PLCH2O75038 1416 aa19.37■□□□□ 0.69
CLNS1A-201ENST00000263309 MYT1LQ9UL68 1186 aa19.37■□□□□ 0.69
CLNS1A-201ENST00000263309 ZNF777Q9ULD5 760 aaPredicted RBP19.37■□□□□ 0.69
CLNS1A-201ENST00000263309 EHBP1L1Q8N3D4 1523 aa19.36■□□□□ 0.69
CLNS1A-201ENST00000263309 ILDR1Q86SU0 546 aaPredicted RBP19.36■□□□□ 0.69
CLNS1A-201ENST00000263309 NEO1Q92859 1461 aa19.35■□□□□ 0.69
CLNS1A-201ENST00000263309 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.35■□□□□ 0.698e-8■■□□□ 13.9
CLNS1A-201ENST00000263309 TIAM1Q13009 1591 aa19.34■□□□□ 0.69
CLNS1A-201ENST00000263309 FANCAO15360 1455 aa19.33■□□□□ 0.68
CLNS1A-201ENST00000263309 CFAP74Q9C0B2 1584 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms