RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 ARHGAP35Q9NRY4 1499 aa29.57■■■□□ 2.32
TRIM47-201ENST00000254816 FHAD1B1AJZ9 1412 aa29.52■■■□□ 2.32
TRIM47-201ENST00000254816 TTBK1Q5TCY1 1321 aaPredicted RBP29.49■■■□□ 2.31
TRIM47-201ENST00000254816 SNAPC4Q5SXM2 1469 aa29.47■■■□□ 2.31
TRIM47-201ENST00000254816 HRCP23327 699 aa29.46■■■□□ 2.31
TRIM47-201ENST00000254816 P3H3Q8IVL6 736 aa29.38■■■□□ 2.29
TRIM47-201ENST00000254816 MAGI1Q96QZ7 1491 aaPredicted RBP29.32■■■□□ 2.28
TRIM47-201ENST00000254816 APLP2Q06481 763 aa29.31■■■□□ 2.28
TRIM47-201ENST00000254816 EFCAB5A4FU69 1503 aa29.3■■■□□ 2.28
TRIM47-201ENST00000254816 FHOD3Q2V2M9 1422 aa29.29■■■□□ 2.28
TRIM47-201ENST00000254816 GRIN2AQ12879 1464 aa29.28■■■□□ 2.28
TRIM47-201ENST00000254816 IQGAP2Q13576 1575 aa29.25■■■□□ 2.27
TRIM47-201ENST00000254816 SAMD9Q5K651 1589 aa29.24■■■□□ 2.27
TRIM47-201ENST00000254816 SYNJ2O15056 1496 aa29.24■■■□□ 2.27
TRIM47-201ENST00000254816 FBLN2P98095 1184 aa29.22■■■□□ 2.27
TRIM47-201ENST00000254816 CHMP7Q8WUX9 453 aaPredicted RBP29.22■■■□□ 2.27
TRIM47-201ENST00000254816 PCF11O94913 1555 aaKnown RBP29.17■■■□□ 2.26
TRIM47-201ENST00000254816 CEP170Q5SW79 1584 aa29.15■■■□□ 2.26
TRIM47-201ENST00000254816 KIAA0586Q9BVV6 1533 aa29.12■■■□□ 2.25
TRIM47-201ENST00000254816 KANK4Q5T7N3 995 aaPredicted RBP29.12■■■□□ 2.25
TRIM47-201ENST00000254816 ATP1B4Q9UN42 357 aaPredicted RBP29.08■■■□□ 2.25
TRIM47-201ENST00000254816 UGGT2Q9NYU1 1516 aa29.06■■■□□ 2.24
TRIM47-201ENST00000254816 FMN1Q68DA7 1419 aa29.05■■■□□ 2.24
TRIM47-201ENST00000254816 TIAM1Q13009 1591 aa29.05■■■□□ 2.24
TRIM47-201ENST00000254816 CHD1O14646 1710 aa29.04■■■□□ 2.24
TRIM47-201ENST00000254816 NUP160Q12769 1436 aa29.02■■■□□ 2.24
TRIM47-201ENST00000254816 CASKIN1Q8WXD9 1431 aa29.02■■■□□ 2.24
TRIM47-201ENST00000254816 FYCO1Q9BQS8 1478 aa29.02■■■□□ 2.24
TRIM47-201ENST00000254816 CFAP43Q8NDM7 1665 aa28.99■■■□□ 2.23
TRIM47-201ENST00000254816 MAP3K1Q13233 1512 aa28.97■■■□□ 2.23
TRIM47-201ENST00000254816 DISP1Q96F81 1524 aa28.97■■■□□ 2.23
TRIM47-201ENST00000254816 KIAA0556O60303 1618 aa28.97■■■□□ 2.23
TRIM47-201ENST00000254816 LRRIQ1Q96JM4 1722 aa28.96■■■□□ 2.23
TRIM47-201ENST00000254816 LRRC9Q6ZRR7 1453 aa28.9■■■□□ 2.22
TRIM47-201ENST00000254816 JPH4Q96JJ6 628 aa28.86■■■□□ 2.21
TRIM47-201ENST00000254816 HECW1Q76N89 1606 aa28.79■■■□□ 2.2
TRIM47-201ENST00000254816 CARMIL2Q6F5E8 1435 aa28.75■■■□□ 2.19
TRIM47-201ENST00000254816 HNRNPUL2Q1KMD3 747 aaKnown RBP28.73■■■□□ 2.19
TRIM47-201ENST00000254816 ARID3CA6NKF2 412 aa28.71■■■□□ 2.19
TRIM47-201ENST00000254816 RAPGEF6Q8TEU7 1601 aa28.7■■■□□ 2.19
TRIM47-201ENST00000254816 RRBP1Q9P2E9 1410 aaKnown RBP28.69■■■□□ 2.18
TRIM47-201ENST00000254816 EPRSP07814 1512 aaKnown RBP28.69■■■□□ 2.18
TRIM47-201ENST00000254816 CDK13Q14004 1512 aaKnown RBP28.69■■■□□ 2.18
TRIM47-201ENST00000254816 CCDC18Q5T9S5 1454 aa28.69■■■□□ 2.18
TRIM47-201ENST00000254816 PHLDB1Q86UU1 1377 aa28.68■■■□□ 2.18
TRIM47-201ENST00000254816 PRG4Q92954 1404 aaPredicted RBP28.68■■■□□ 2.18
TRIM47-201ENST00000254816 MTUS2Q5JR59 1369 aa28.68■■■□□ 2.18
TRIM47-201ENST00000254816 MAGI3Q5TCQ9 1506 aa28.65■■■□□ 2.18
TRIM47-201ENST00000254816 SHROOM2Q13796 1616 aa28.64■■■□□ 2.18
TRIM47-201ENST00000254816 PLB1Q6P1J6 1458 aa28.64■■■□□ 2.17
TRIM47-201ENST00000254816 NUP153P49790 1475 aaKnown RBP28.63■■■□□ 2.17
TRIM47-201ENST00000254816 CCNB3Q8WWL7 1395 aa28.62■■■□□ 2.17
TRIM47-201ENST00000254816 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.6■■■□□ 2.17
TRIM47-201ENST00000254816 EHBP1L1Q8N3D4 1523 aa28.6■■■□□ 2.17
TRIM47-201ENST00000254816 CLASP1Q7Z460 1538 aa28.59■■■□□ 2.17
TRIM47-201ENST00000254816 SUPT6HQ7KZ85 1726 aaKnown RBP28.57■■■□□ 2.16
TRIM47-201ENST00000254816 ERCC6L2Q5T890 1561 aa28.56■■■□□ 2.16
TRIM47-201ENST00000254816 NCOA2Q15596 1464 aa28.53■■■□□ 2.16
TRIM47-201ENST00000254816 ABCA8O94911 1581 aa28.51■■■□□ 2.16
TRIM47-201ENST00000254816 ITGAEP38570 1179 aa28.5■■■□□ 2.15
TRIM47-201ENST00000254816 PTPRGP23470 1445 aa28.49■■■□□ 2.15
TRIM47-201ENST00000254816 FAM50AQ14320 339 aaKnown RBP28.46■■■□□ 2.15
TRIM47-201ENST00000254816 CCER1Q8TC90 406 aaPredicted RBP28.45■■■□□ 2.15
TRIM47-201ENST00000254816 ARHGEF11O15085 1522 aa28.44■■■□□ 2.14
TRIM47-201ENST00000254816 FGD6Q6ZV73 1430 aa28.42■■■□□ 2.14
TRIM47-201ENST00000254816 MYOM3Q5VTT5 1437 aa28.4■■■□□ 2.14
TRIM47-201ENST00000254816 ZEB1P37275 1124 aaPredicted RBP28.38■■■□□ 2.13
TRIM47-201ENST00000254816 CDK11AQ9UQ88 783 aaPredicted RBP28.36■■■□□ 2.13
TRIM47-201ENST00000254816 ATP10BO94823 1461 aa28.35■■■□□ 2.13
TRIM47-201ENST00000254816 UACAQ9BZF9 1416 aa28.32■■■□□ 2.12
TRIM47-201ENST00000254816 PTPN23Q9H3S7 1636 aa28.31■■■□□ 2.12
TRIM47-201ENST00000254816 TROQ12816 1431 aaPredicted RBP28.31■■■□□ 2.12
TRIM47-201ENST00000254816 KIF14Q15058 1648 aa28.29■■■□□ 2.12
TRIM47-201ENST00000254816 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.29■■■□□ 2.12
TRIM47-201ENST00000254816 OSCARQ8IYS5 282 aa28.27■■■□□ 2.12
TRIM47-201ENST00000254816 ADCY10Q96PN6 1610 aa28.25■■■□□ 2.11
TRIM47-201ENST00000254816 ABCC2Q92887 1545 aa28.23■■■□□ 2.11
TRIM47-201ENST00000254816 PLEKHD1A6NEE1 506 aa28.22■■■□□ 2.11
TRIM47-201ENST00000254816 TCOF1Q13428 1488 aaKnown RBP28.19■■■□□ 2.1
TRIM47-201ENST00000254816 MIA2Q96PC5 1412 aa28.18■■■□□ 2.1
TRIM47-201ENST00000254816 PTPRKQ15262 1439 aa28.17■■■□□ 2.1
TRIM47-201ENST00000254816 RAB3GAP2Q9H2M9 1393 aa28.14■■■□□ 2.1
TRIM47-201ENST00000254816 ITSN2Q9NZM3 1697 aa28.14■■■□□ 2.1
TRIM47-201ENST00000254816 SETD5Q9C0A6 1442 aa28.13■■■□□ 2.09
TRIM47-201ENST00000254816 ZCCHC11Q5TAX3 1644 aaKnown RBP28.11■■■□□ 2.09
TRIM47-201ENST00000254816 CDC42BPAQ5VT25 1732 aa28.11■■■□□ 2.09
TRIM47-201ENST00000254816 GPATCH8Q9UKJ3 1502 aaKnown RBP28.1■■■□□ 2.09
TRIM47-201ENST00000254816 UHRF1BP1LA0JNW5 1464 aa28.09■■■□□ 2.09
TRIM47-201ENST00000254816 ZNF644Q9H582 1327 aaPredicted RBP28.09■■■□□ 2.09
TRIM47-201ENST00000254816 ABCC10Q5T3U5 1492 aa28.08■■■□□ 2.09
TRIM47-201ENST00000254816 DHX57Q6P158 1386 aaKnown RBP28.08■■■□□ 2.09
TRIM47-201ENST00000254816 CFDP1Q9UEE9 299 aaPredicted RBP28.04■■■□□ 2.08
TRIM47-201ENST00000254816 KDM5BQ9UGL1 1544 aa28.03■■■□□ 2.08
TRIM47-201ENST00000254816 CHIC2Q9UKJ5 165 aa28.02■■■□□ 2.08
TRIM47-201ENST00000254816 ZNF777Q9ULD5 760 aaPredicted RBP28.01■■■□□ 2.07
TRIM47-201ENST00000254816 CAMSAP2Q08AD1 1489 aa28.01■■■□□ 2.07
TRIM47-201ENST00000254816 DNMT1P26358 1616 aaKnown RBP27.99■■■□□ 2.07
TRIM47-201ENST00000254816 HFM1A2PYH4 1435 aa27.97■■■□□ 2.07
TRIM47-201ENST00000254816 TTC37Q6PGP7 1564 aa27.96■■■□□ 2.07
TRIM47-201ENST00000254816 DAPK1P53355 1430 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms