RNA–Protein interactions for RNA: ENST00000239165.8

HOXB7-201, Transcript of homeobox B7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB7, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB7-201ENST00000239165 CUL7Q14999 1698 aa37.06■■■■□ 3.52
HOXB7-201ENST00000239165 TRHP20396 242 aaPredicted RBP37.02■■■■□ 3.52
HOXB7-201ENST00000239165 JPH4Q96JJ6 628 aa37.01■■■■□ 3.51
HOXB7-201ENST00000239165 CARMIL1Q5VZK9 1371 aa36.97■■■■□ 3.51
HOXB7-201ENST00000239165 PRG4Q92954 1404 aaPredicted RBP36.97■■■■□ 3.51
HOXB7-201ENST00000239165 CSRNP3Q8WYN3 585 aa36.93■■■■□ 3.5
HOXB7-201ENST00000239165 PRXQ9BXM0 1461 aa36.9■■■■□ 3.5
HOXB7-201ENST00000239165 KIAA0586Q9BVV6 1533 aa36.89■■■■□ 3.5
HOXB7-201ENST00000239165 RAPGEF2Q9Y4G8 1499 aa36.83■■■■□ 3.49
HOXB7-201ENST00000239165 FAM9AQ8IZU1 332 aaPredicted RBP36.79■■■■□ 3.48
HOXB7-201ENST00000239165 KIF21BO75037 1637 aa36.68■■■■□ 3.46
HOXB7-201ENST00000239165 IQGAP2Q13576 1575 aa36.58■■■■□ 3.45
HOXB7-201ENST00000239165 ADCY10Q96PN6 1610 aa36.52■■■■□ 3.44
HOXB7-201ENST00000239165 GOLGA3Q08378 1498 aa36.49■■■■□ 3.43
HOXB7-201ENST00000239165 CARMIL2Q6F5E8 1435 aa36.48■■■■□ 3.43
HOXB7-201ENST00000239165 PTPRGP23470 1445 aa36.45■■■■□ 3.43
HOXB7-201ENST00000239165 NPM1P06748 294 aaKnown RBP eCLIP36.43■■■■□ 3.42
HOXB7-201ENST00000239165 KIF13AQ9H1H9 1805 aa36.43■■■■□ 3.42
HOXB7-201ENST00000239165 TNIKQ9UKE5 1360 aa36.42■■■■□ 3.42
HOXB7-201ENST00000239165 DISP1Q96F81 1524 aa36.4■■■■□ 3.42
HOXB7-201ENST00000239165 CTTNBP2Q8WZ74 1663 aa36.39■■■■□ 3.42
HOXB7-201ENST00000239165 MAPKBP1O60336 1514 aa36.39■■■■□ 3.42
HOXB7-201ENST00000239165 UGGT2Q9NYU1 1516 aa36.38■■■■□ 3.41
HOXB7-201ENST00000239165 TTBK1Q5TCY1 1321 aaPredicted RBP36.31■■■■□ 3.4
HOXB7-201ENST00000239165 ABCC10Q5T3U5 1492 aa36.3■■■■□ 3.4
HOXB7-201ENST00000239165 KIAA0556O60303 1618 aa36.25■■■■□ 3.39
HOXB7-201ENST00000239165 UBTFP17480 764 aaKnown RBP36.23■■■■□ 3.39
HOXB7-201ENST00000239165 FAM69CQ0P6D2 419 aa36.23■■■■□ 3.39
HOXB7-201ENST00000239165 DIP2BQ9P265 1576 aa36.23■■■■□ 3.39
HOXB7-201ENST00000239165 UHRF1BP1LA0JNW5 1464 aa36.21■■■■□ 3.39
HOXB7-201ENST00000239165 ABCC2Q92887 1545 aa36.2■■■■□ 3.39
HOXB7-201ENST00000239165 UACAQ9BZF9 1416 aa36.2■■■■□ 3.39
HOXB7-201ENST00000239165 EHMT2Q96KQ7 1210 aa36.18■■■■□ 3.38
HOXB7-201ENST00000239165 LOC105371045A0A1W2PR82 267 aa36.05■■■■□ 3.36
HOXB7-201ENST00000239165 KDM5BQ9UGL1 1544 aa36.05■■■■□ 3.36
HOXB7-201ENST00000239165 SAMD9Q5K651 1589 aa36.05■■■■□ 3.36
HOXB7-201ENST00000239165 ASXL2Q76L83 1435 aa36.04■■■■□ 3.36
HOXB7-201ENST00000239165 PLB1Q6P1J6 1458 aa36.01■■■■□ 3.36
HOXB7-201ENST00000239165 EFCAB5A4FU69 1503 aa35.99■■■■□ 3.35
HOXB7-201ENST00000239165 ZCCHC11Q5TAX3 1644 aaKnown RBP35.96■■■■□ 3.35
HOXB7-201ENST00000239165 TSPOAP1O95153 1857 aa35.95■■■■□ 3.35
HOXB7-201ENST00000239165 GLI2P10070 1586 aa35.93■■■■□ 3.34
HOXB7-201ENST00000239165 ABCA8O94911 1581 aa35.91■■■■□ 3.34
HOXB7-201ENST00000239165 ARHGAP35Q9NRY4 1499 aa35.89■■■■□ 3.34
HOXB7-201ENST00000239165 RANGAP1P46060 587 aaPredicted RBP35.84■■■■□ 3.33
HOXB7-201ENST00000239165 EPRSP07814 1512 aaKnown RBP35.83■■■■□ 3.33
HOXB7-201ENST00000239165 CLIP1P30622 1438 aa35.82■■■■□ 3.33
HOXB7-201ENST00000239165 CEP162Q5TB80 1403 aa35.82■■■■□ 3.32
HOXB7-201ENST00000239165 P3H3Q8IVL6 736 aa35.8■■■■□ 3.32
HOXB7-201ENST00000239165 PPRC1Q5VV67 1664 aaKnown RBP35.8■■■■□ 3.32
HOXB7-201ENST00000239165 FHOD3Q2V2M9 1422 aa35.78■■■■□ 3.32
HOXB7-201ENST00000239165 KDM6BO15054 1643 aa35.78■■■■□ 3.32
HOXB7-201ENST00000239165 WDR7Q9Y4E6 1490 aa35.75■■■■□ 3.31
HOXB7-201ENST00000239165 MAP3K4Q9Y6R4 1608 aa35.74■■■■□ 3.31
HOXB7-201ENST00000239165 FMN1Q68DA7 1419 aa35.63■■■■□ 3.29
HOXB7-201ENST00000239165 ATP10BO94823 1461 aa35.61■■■■□ 3.29
HOXB7-201ENST00000239165 RAPGEF6Q8TEU7 1601 aa35.59■■■■□ 3.29
HOXB7-201ENST00000239165 AEBP2Q6ZN18 517 aaPredicted RBP35.58■■■■□ 3.29
HOXB7-201ENST00000239165 TEX14Q8IWB6 1497 aa35.57■■■■□ 3.29
HOXB7-201ENST00000239165 KCNH8Q96L42 1107 aa35.56■■■■□ 3.28
HOXB7-201ENST00000239165 ARID3CA6NKF2 412 aa35.54■■■■□ 3.28
HOXB7-201ENST00000239165 CFAP43Q8NDM7 1665 aa35.54■■■■□ 3.28
HOXB7-201ENST00000239165 COL17A1Q9UMD9 1497 aaPredicted RBP35.5■■■■□ 3.27
HOXB7-201ENST00000239165 CD109Q6YHK3 1445 aa35.49■■■■□ 3.27
HOXB7-201ENST00000239165 MAGI3Q5TCQ9 1506 aa35.47■■■■□ 3.27
HOXB7-201ENST00000239165 NUP153P49790 1475 aaKnown RBP35.46■■■■□ 3.27
HOXB7-201ENST00000239165 CASKIN1Q8WXD9 1431 aa35.44■■■■□ 3.26
HOXB7-201ENST00000239165 PCF11O94913 1555 aaKnown RBP35.38■■■■□ 3.25
HOXB7-201ENST00000239165 VPS8Q8N3P4 1428 aa35.38■■■■□ 3.25
HOXB7-201ENST00000239165 FYCO1Q9BQS8 1478 aa35.37■■■■□ 3.25
HOXB7-201ENST00000239165 HECW1Q76N89 1606 aa35.37■■■■□ 3.25
HOXB7-201ENST00000239165 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.35■■■■□ 3.25
HOXB7-201ENST00000239165 HNRNPUL2Q1KMD3 747 aaKnown RBP35.35■■■■□ 3.25
HOXB7-201ENST00000239165 ABCA9Q8IUA7 1624 aa35.34■■■■□ 3.25
HOXB7-201ENST00000239165 KDM4FA0A1W2PPD8 638 aa35.26■■■■□ 3.24
HOXB7-201ENST00000239165 CCDC18Q5T9S5 1454 aa35.22■■■■□ 3.23
HOXB7-201ENST00000239165 PLEKHD1A6NEE1 506 aa35.22■■■■□ 3.23
HOXB7-201ENST00000239165 LRRIQ1Q96JM4 1722 aa35.2■■■■□ 3.23
HOXB7-201ENST00000239165 ARAP3Q8WWN8 1544 aa35.19■■■■□ 3.22
HOXB7-201ENST00000239165 CDK13Q14004 1512 aaKnown RBP35.18■■■■□ 3.22
HOXB7-201ENST00000239165 ATP1B4Q9UN42 357 aaPredicted RBP35.17■■■■□ 3.22
HOXB7-201ENST00000239165 PHLDB1Q86UU1 1377 aa35.16■■■■□ 3.22
HOXB7-201ENST00000239165 NEO1Q92859 1461 aa35.11■■■■□ 3.21
HOXB7-201ENST00000239165 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.07■■■■□ 3.21
HOXB7-201ENST00000239165 ADGRL1O94910 1474 aa35.06■■■■□ 3.2
HOXB7-201ENST00000239165 MAP3K1Q13233 1512 aa35.06■■■■□ 3.2
HOXB7-201ENST00000239165 CDK11AQ9UQ88 783 aaPredicted RBP35.03■■■■□ 3.2
HOXB7-201ENST00000239165 TTC37Q6PGP7 1564 aa35■■■■□ 3.19
HOXB7-201ENST00000239165 TIAM1Q13009 1591 aa34.99■■■■□ 3.19
HOXB7-201ENST00000239165 TROQ12816 1431 aaPredicted RBP34.98■■■■□ 3.19
HOXB7-201ENST00000239165 RAPGEF3O95398 923 aa34.96■■■■□ 3.19
HOXB7-201ENST00000239165 FRMPD1Q5SYB0 1578 aa34.92■■■■□ 3.18
HOXB7-201ENST00000239165 FANCAO15360 1455 aa34.92■■■■□ 3.18
HOXB7-201ENST00000239165 CFAP74Q9C0B2 1584 aa34.91■■■■□ 3.18
HOXB7-201ENST00000239165 AKNAQ7Z591 1439 aa34.9■■■■□ 3.18
HOXB7-201ENST00000239165 EHBP1L1Q8N3D4 1523 aa34.86■■■■□ 3.17
HOXB7-201ENST00000239165 PLCH2O75038 1416 aa34.85■■■■□ 3.17
HOXB7-201ENST00000239165 DENND4BO75064 1496 aaPredicted RBP34.84■■■■□ 3.17
HOXB7-201ENST00000239165 LRRC9Q6ZRR7 1453 aa34.84■■■■□ 3.17
HOXB7-201ENST00000239165 MTUS2Q5JR59 1369 aa34.84■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms