RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 RIMBP3BA6NNM3 1639 aa26.09■■□□□ 1.77
GAPDH-201ENST00000229239 RIMBP3Q9UFD9 1639 aa26.09■■□□□ 1.77
GAPDH-201ENST00000229239 CHMP7Q8WUX9 453 aaPredicted RBP26.05■■□□□ 1.76
GAPDH-201ENST00000229239 ARHGEF11O15085 1522 aa26.03■■□□□ 1.76
GAPDH-201ENST00000229239 SYNJ2O15056 1496 aa26■■□□□ 1.75
GAPDH-201ENST00000229239 VPS8Q8N3P4 1428 aa26■■□□□ 1.75
GAPDH-201ENST00000229239 PPARGC1BQ86YN6 1023 aaKnown RBP25.99■■□□□ 1.75
GAPDH-201ENST00000229239 CLASP1Q7Z460 1538 aa25.95■■□□□ 1.75
GAPDH-201ENST00000229239 ADAMTS12P58397 1594 aa25.87■■□□□ 1.73
GAPDH-201ENST00000229239 IGF1RP08069 1367 aa25.85■■□□□ 1.73
GAPDH-201ENST00000229239 ARAP1Q96P48 1450 aa25.82■■□□□ 1.72
GAPDH-201ENST00000229239 FHAD1B1AJZ9 1412 aa25.81■■□□□ 1.72
GAPDH-201ENST00000229239 GRIN2AQ12879 1464 aa25.8■■□□□ 1.72
GAPDH-201ENST00000229239 APLP2Q06481 763 aa25.77■■□□□ 1.72
GAPDH-201ENST00000229239 CARMIL1Q5VZK9 1371 aa25.74■■□□□ 1.71
GAPDH-201ENST00000229239 CYB5RLQ6IPT4 315 aa25.74■■□□□ 1.71
GAPDH-201ENST00000229239 NUP160Q12769 1436 aa25.72■■□□□ 1.71
GAPDH-201ENST00000229239 CEP170Q5SW79 1584 aa25.71■■□□□ 1.71
GAPDH-201ENST00000229239 TTBK1Q5TCY1 1321 aaPredicted RBP25.64■■□□□ 1.7
GAPDH-201ENST00000229239 ARHGAP35Q9NRY4 1499 aa25.64■■□□□ 1.7
GAPDH-201ENST00000229239 CUL7Q14999 1698 aa25.62■■□□□ 1.69
GAPDH-201ENST00000229239 RANGAP1P46060 587 aaPredicted RBP25.62■■□□□ 1.69
GAPDH-201ENST00000229239 SHROOM2Q13796 1616 aa25.6■■□□□ 1.69
GAPDH-201ENST00000229239 CCER1Q8TC90 406 aaPredicted RBP25.57■■□□□ 1.68
GAPDH-201ENST00000229239 ERCC6L2Q5T890 1561 aa25.56■■□□□ 1.68
GAPDH-201ENST00000229239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.54■■□□□ 1.68
GAPDH-201ENST00000229239 MAP3K1Q13233 1512 aa25.49■■□□□ 1.67
GAPDH-201ENST00000229239 JPH4Q96JJ6 628 aa25.49■■□□□ 1.67
GAPDH-201ENST00000229239 EFCAB5A4FU69 1503 aa25.43■■□□□ 1.66
GAPDH-201ENST00000229239 PRG4Q92954 1404 aaPredicted RBP25.41■■□□□ 1.66
GAPDH-201ENST00000229239 KIAA0586Q9BVV6 1533 aa25.41■■□□□ 1.66
GAPDH-201ENST00000229239 CTTNBP2Q8WZ74 1663 aa25.38■■□□□ 1.65
GAPDH-201ENST00000229239 RRBP1Q9P2E9 1410 aaKnown RBP25.35■■□□□ 1.65
GAPDH-201ENST00000229239 KANK4Q5T7N3 995 aaPredicted RBP25.34■■□□□ 1.65
GAPDH-201ENST00000229239 TIAM1Q13009 1591 aa25.33■■□□□ 1.65
GAPDH-201ENST00000229239 HNRNPUL2Q1KMD3 747 aaKnown RBP25.3■■□□□ 1.64
GAPDH-201ENST00000229239 TRHP20396 242 aaPredicted RBP25.29■■□□□ 1.64
GAPDH-201ENST00000229239 FYCO1Q9BQS8 1478 aa25.24■■□□□ 1.63
GAPDH-201ENST00000229239 CFAP43Q8NDM7 1665 aa25.23■■□□□ 1.63
GAPDH-201ENST00000229239 LRRC9Q6ZRR7 1453 aa25.22■■□□□ 1.63
GAPDH-201ENST00000229239 PCF11O94913 1555 aaKnown RBP25.21■■□□□ 1.63
GAPDH-201ENST00000229239 CASKIN1Q8WXD9 1431 aa25.21■■□□□ 1.63
GAPDH-201ENST00000229239 FMN1Q68DA7 1419 aa25.2■■□□□ 1.62
GAPDH-201ENST00000229239 CCNB3Q8WWL7 1395 aa25.2■■□□□ 1.62
GAPDH-201ENST00000229239 IQGAP2Q13576 1575 aa25.19■■□□□ 1.62
GAPDH-201ENST00000229239 SAMD9Q5K651 1589 aa25.18■■□□□ 1.62
GAPDH-201ENST00000229239 FHOD3Q2V2M9 1422 aa25.18■■□□□ 1.62
GAPDH-201ENST00000229239 CARMIL2Q6F5E8 1435 aa25.16■■□□□ 1.62
GAPDH-201ENST00000229239 CLSPNQ9HAW4 1339 aa25.13■■□□□ 1.61
GAPDH-201ENST00000229239 ADCY10Q96PN6 1610 aa25.11■■□□□ 1.61
GAPDH-201ENST00000229239 PTPRGP23470 1445 aa25.1■■□□□ 1.61
GAPDH-201ENST00000229239 P3H3Q8IVL6 736 aa25.09■■□□□ 1.61
GAPDH-201ENST00000229239 UGGT2Q9NYU1 1516 aa25.06■■□□□ 1.6
GAPDH-201ENST00000229239 NPM1P06748 294 aaKnown RBP eCLIP25.06■■□□□ 1.6
GAPDH-201ENST00000229239 DISP1Q96F81 1524 aa25.05■■□□□ 1.6
GAPDH-201ENST00000229239 KIF13AQ9H1H9 1805 aa25.04■■□□□ 1.6
GAPDH-201ENST00000229239 MAPKBP1O60336 1514 aa25■■□□□ 1.59
GAPDH-201ENST00000229239 PHLDB1Q86UU1 1377 aa24.99■■□□□ 1.59
GAPDH-201ENST00000229239 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.99■■□□□ 1.59
GAPDH-201ENST00000229239 DHX57Q6P158 1386 aaKnown RBP24.98■■□□□ 1.59
GAPDH-201ENST00000229239 KIAA0556O60303 1618 aa24.96■■□□□ 1.59
GAPDH-201ENST00000229239 ATP1B4Q9UN42 357 aaPredicted RBP24.94■■□□□ 1.58
GAPDH-201ENST00000229239 ABCC10Q5T3U5 1492 aa24.92■■□□□ 1.58
GAPDH-201ENST00000229239 UACAQ9BZF9 1416 aa24.91■■□□□ 1.58
GAPDH-201ENST00000229239 UHRF1BP1LA0JNW5 1464 aa24.9■■□□□ 1.58
GAPDH-201ENST00000229239 DIP2BQ9P265 1576 aa24.89■■□□□ 1.58
GAPDH-201ENST00000229239 ABCC2Q92887 1545 aa24.89■■□□□ 1.58
GAPDH-201ENST00000229239 CCDC18Q5T9S5 1454 aa24.89■■□□□ 1.57
GAPDH-201ENST00000229239 MTUS2Q5JR59 1369 aa24.86■■□□□ 1.57
GAPDH-201ENST00000229239 EHBP1L1Q8N3D4 1523 aa24.85■■□□□ 1.57
GAPDH-201ENST00000229239 HECW1Q76N89 1606 aa24.84■■□□□ 1.57
GAPDH-201ENST00000229239 ZNF316A6NFI3 1004 aaPredicted RBP24.84■■□□□ 1.57
GAPDH-201ENST00000229239 FAM69CQ0P6D2 419 aa24.83■■□□□ 1.57
GAPDH-201ENST00000229239 SETD5Q9C0A6 1442 aa24.82■■□□□ 1.56
GAPDH-201ENST00000229239 LRRIQ1Q96JM4 1722 aa24.82■■□□□ 1.56
GAPDH-201ENST00000229239 RAB3GAP2Q9H2M9 1393 aa24.8■■□□□ 1.56
GAPDH-201ENST00000229239 FGD6Q6ZV73 1430 aa24.8■■□□□ 1.56
GAPDH-201ENST00000229239 KDM5BQ9UGL1 1544 aa24.79■■□□□ 1.56
GAPDH-201ENST00000229239 SUPT6HQ7KZ85 1726 aaKnown RBP24.78■■□□□ 1.56
GAPDH-201ENST00000229239 DIEXFQ68CQ4 756 aaKnown RBP24.78■■□□□ 1.56
GAPDH-201ENST00000229239 PLB1Q6P1J6 1458 aa24.78■■□□□ 1.56
GAPDH-201ENST00000229239 ITGAEP38570 1179 aa24.77■■□□□ 1.56
GAPDH-201ENST00000229239 FAM50AQ14320 339 aaKnown RBP24.77■■□□□ 1.56
GAPDH-201ENST00000229239 NCOA2Q15596 1464 aa24.75■■□□□ 1.55
GAPDH-201ENST00000229239 ASXL2Q76L83 1435 aa24.75■■□□□ 1.55
GAPDH-201ENST00000229239 ZCCHC11Q5TAX3 1644 aaKnown RBP24.74■■□□□ 1.55
GAPDH-201ENST00000229239 MYOM3Q5VTT5 1437 aa24.73■■□□□ 1.55
GAPDH-201ENST00000229239 ABCA8O94911 1581 aa24.73■■□□□ 1.55
GAPDH-201ENST00000229239 EPRSP07814 1512 aaKnown RBP24.71■■□□□ 1.55
GAPDH-201ENST00000229239 TSPOAP1O95153 1857 aa24.69■■□□□ 1.54
GAPDH-201ENST00000229239 GLI2P10070 1586 aa24.69■■□□□ 1.54
GAPDH-201ENST00000229239 MAGI3Q5TCQ9 1506 aa24.65■■□□□ 1.54
GAPDH-201ENST00000229239 PPRC1Q5VV67 1664 aaKnown RBP24.63■■□□□ 1.53
GAPDH-201ENST00000229239 TCOF1Q13428 1488 aaKnown RBP24.61■■□□□ 1.53
GAPDH-201ENST00000229239 ARID3CA6NKF2 412 aa24.6■■□□□ 1.53
GAPDH-201ENST00000229239 PTPN23Q9H3S7 1636 aa24.59■■□□□ 1.53
GAPDH-201ENST00000229239 HFM1A2PYH4 1435 aa24.59■■□□□ 1.53
GAPDH-201ENST00000229239 MIA2Q96PC5 1412 aa24.58■■□□□ 1.53
GAPDH-201ENST00000229239 WDR7Q9Y4E6 1490 aa24.58■■□□□ 1.52
GAPDH-201ENST00000229239 MAP3K4Q9Y6R4 1608 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms