RNA–Protein interactions for RNA: ENST00000219168.8

LYRM1-201, Transcript of LYR motif containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LYRM1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-201ENST00000219168 EIF4G3O43432 1585 aaKnown RBP35.09■■■■□ 3.21
LYRM1-201ENST00000219168 ADAMTS12P58397 1594 aa35.09■■■■□ 3.21
LYRM1-201ENST00000219168 APLP2Q06481 763 aa35.05■■■■□ 3.2
LYRM1-201ENST00000219168 TTBK1Q5TCY1 1321 aaPredicted RBP34.99■■■■□ 3.19
LYRM1-201ENST00000219168 SNAPC4Q5SXM2 1469 aa34.97■■■■□ 3.19
LYRM1-201ENST00000219168 EFCAB5A4FU69 1503 aa34.93■■■■□ 3.18
LYRM1-201ENST00000219168 MAGI1Q96QZ7 1491 aaPredicted RBP34.88■■■■□ 3.17
LYRM1-201ENST00000219168 P3H3Q8IVL6 736 aa34.88■■■■□ 3.17
LYRM1-201ENST00000219168 FHOD3Q2V2M9 1422 aa34.8■■■■□ 3.16
LYRM1-201ENST00000219168 GRIN2AQ12879 1464 aa34.78■■■■□ 3.16
LYRM1-201ENST00000219168 IQGAP2Q13576 1575 aa34.76■■■■□ 3.15
LYRM1-201ENST00000219168 SYNJ2O15056 1496 aa34.75■■■■□ 3.15
LYRM1-201ENST00000219168 SAMD9Q5K651 1589 aa34.74■■■■□ 3.15
LYRM1-201ENST00000219168 CHMP7Q8WUX9 453 aaPredicted RBP34.74■■■■□ 3.15
LYRM1-201ENST00000219168 FBLN2P98095 1184 aa34.66■■■■□ 3.14
LYRM1-201ENST00000219168 KIAA0586Q9BVV6 1533 aa34.66■■■■□ 3.14
LYRM1-201ENST00000219168 FMN1Q68DA7 1419 aa34.64■■■■□ 3.14
LYRM1-201ENST00000219168 PCF11O94913 1555 aaKnown RBP34.64■■■■□ 3.14
LYRM1-201ENST00000219168 KANK4Q5T7N3 995 aaPredicted RBP34.62■■■■□ 3.13
LYRM1-201ENST00000219168 MAP3K1Q13233 1512 aa34.61■■■■□ 3.13
LYRM1-201ENST00000219168 FYCO1Q9BQS8 1478 aa34.59■■■■□ 3.13
LYRM1-201ENST00000219168 CASKIN1Q8WXD9 1431 aa34.59■■■■□ 3.13
LYRM1-201ENST00000219168 ATP1B4Q9UN42 357 aaPredicted RBP34.58■■■■□ 3.13
LYRM1-201ENST00000219168 UGGT2Q9NYU1 1516 aa34.58■■■■□ 3.13
LYRM1-201ENST00000219168 TIAM1Q13009 1591 aa34.57■■■■□ 3.12
LYRM1-201ENST00000219168 HRCP23327 699 aa34.55■■■■□ 3.12
LYRM1-201ENST00000219168 CEP170Q5SW79 1584 aa34.54■■■■□ 3.12
LYRM1-201ENST00000219168 NUP160Q12769 1436 aa34.5■■■■□ 3.11
LYRM1-201ENST00000219168 CFAP43Q8NDM7 1665 aa34.47■■■■□ 3.11
LYRM1-201ENST00000219168 LRRC9Q6ZRR7 1453 aa34.41■■■■□ 3.1
LYRM1-201ENST00000219168 DISP1Q96F81 1524 aa34.39■■■■□ 3.1
LYRM1-201ENST00000219168 KIAA0556O60303 1618 aa34.38■■■■□ 3.09
LYRM1-201ENST00000219168 CHD1O14646 1710 aa34.31■■■■□ 3.08
LYRM1-201ENST00000219168 JPH4Q96JJ6 628 aa34.31■■■■□ 3.08
LYRM1-201ENST00000219168 HECW1Q76N89 1606 aa34.26■■■■□ 3.07
LYRM1-201ENST00000219168 CARMIL2Q6F5E8 1435 aa34.26■■■■□ 3.07
LYRM1-201ENST00000219168 RRBP1Q9P2E9 1410 aaKnown RBP34.24■■■■□ 3.07
LYRM1-201ENST00000219168 LRRIQ1Q96JM4 1722 aa34.23■■■■□ 3.07
LYRM1-201ENST00000219168 HNRNPUL2Q1KMD3 747 aaKnown RBP34.23■■■■□ 3.07
LYRM1-201ENST00000219168 CCDC18Q5T9S5 1454 aa34.21■■■■□ 3.07
LYRM1-201ENST00000219168 MTUS2Q5JR59 1369 aa34.19■■■■□ 3.06
LYRM1-201ENST00000219168 CCNB3Q8WWL7 1395 aa34.16■■■■□ 3.06
LYRM1-201ENST00000219168 EPRSP07814 1512 aaKnown RBP34.12■■■■□ 3.05
LYRM1-201ENST00000219168 PHLDB1Q86UU1 1377 aa34.11■■■■□ 3.05
LYRM1-201ENST00000219168 ZEB1P37275 1124 aaPredicted RBP34.1■■■■□ 3.05
LYRM1-201ENST00000219168 RAPGEF6Q8TEU7 1601 aa34.09■■■■□ 3.05
LYRM1-201ENST00000219168 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.08■■■■□ 3.05
LYRM1-201ENST00000219168 EHBP1L1Q8N3D4 1523 aa34.07■■■■□ 3.04
LYRM1-201ENST00000219168 PRG4Q92954 1404 aaPredicted RBP34.06■■■■□ 3.04
LYRM1-201ENST00000219168 CDK13Q14004 1512 aaKnown RBP34.04■■■■□ 3.04
LYRM1-201ENST00000219168 CCER1Q8TC90 406 aaPredicted RBP34.03■■■■□ 3.04
LYRM1-201ENST00000219168 ARID3CA6NKF2 412 aa34.01■■■■□ 3.04
LYRM1-201ENST00000219168 NUP153P49790 1475 aaKnown RBP34■■■■□ 3.03
LYRM1-201ENST00000219168 SUPT6HQ7KZ85 1726 aaKnown RBP33.99■■■■□ 3.03
LYRM1-201ENST00000219168 MAGI3Q5TCQ9 1506 aa33.97■■■■□ 3.03
LYRM1-201ENST00000219168 SHROOM2Q13796 1616 aa33.97■■■■□ 3.03
LYRM1-201ENST00000219168 PLB1Q6P1J6 1458 aa33.97■■■■□ 3.03
LYRM1-201ENST00000219168 NCOA2Q15596 1464 aa33.95■■■■□ 3.03
LYRM1-201ENST00000219168 FAM50AQ14320 339 aaKnown RBP33.92■■■■□ 3.02
LYRM1-201ENST00000219168 CLASP1Q7Z460 1538 aa33.9■■■■□ 3.02
LYRM1-201ENST00000219168 PTPRGP23470 1445 aa33.89■■■■□ 3.02
LYRM1-201ENST00000219168 ITGAEP38570 1179 aa33.89■■■■□ 3.02
LYRM1-201ENST00000219168 ABCA8O94911 1581 aa33.88■■■■□ 3.01
LYRM1-201ENST00000219168 CDK11AQ9UQ88 783 aaPredicted RBP33.88■■■■□ 3.01
LYRM1-201ENST00000219168 FGD6Q6ZV73 1430 aa33.87■■■■□ 3.01
LYRM1-201ENST00000219168 MYOM3Q5VTT5 1437 aa33.84■■■■□ 3.01
LYRM1-201ENST00000219168 ARHGEF11O15085 1522 aa33.84■■■■□ 3.01
LYRM1-201ENST00000219168 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.83■■■■□ 3.01
LYRM1-201ENST00000219168 ERCC6L2Q5T890 1561 aa33.75■■■□□ 2.99
LYRM1-201ENST00000219168 TROQ12816 1431 aaPredicted RBP33.73■■■□□ 2.99
LYRM1-201ENST00000219168 ATP10BO94823 1461 aa33.69■■■□□ 2.98
LYRM1-201ENST00000219168 UACAQ9BZF9 1416 aa33.68■■■□□ 2.98
LYRM1-201ENST00000219168 PTPN23Q9H3S7 1636 aa33.67■■■□□ 2.98
LYRM1-201ENST00000219168 PLEKHD1A6NEE1 506 aa33.64■■■□□ 2.98
LYRM1-201ENST00000219168 MIA2Q96PC5 1412 aa33.63■■■□□ 2.97
LYRM1-201ENST00000219168 TCOF1Q13428 1488 aaKnown RBP33.61■■■□□ 2.97
LYRM1-201ENST00000219168 SETD5Q9C0A6 1442 aa33.58■■■□□ 2.97
LYRM1-201ENST00000219168 ADCY10Q96PN6 1610 aa33.58■■■□□ 2.97
LYRM1-201ENST00000219168 OSCARQ8IYS5 282 aa33.57■■■□□ 2.96
LYRM1-201ENST00000219168 ABCC2Q92887 1545 aa33.55■■■□□ 2.96
LYRM1-201ENST00000219168 RAB3GAP2Q9H2M9 1393 aa33.54■■■□□ 2.96
LYRM1-201ENST00000219168 KIF14Q15058 1648 aa33.52■■■□□ 2.96
LYRM1-201ENST00000219168 DHX57Q6P158 1386 aaKnown RBP33.49■■■□□ 2.95
LYRM1-201ENST00000219168 PTPRKQ15262 1439 aa33.47■■■□□ 2.95
LYRM1-201ENST00000219168 ITSN2Q9NZM3 1697 aa33.46■■■□□ 2.95
LYRM1-201ENST00000219168 UHRF1BP1LA0JNW5 1464 aa33.44■■■□□ 2.94
LYRM1-201ENST00000219168 GPATCH8Q9UKJ3 1502 aaKnown RBP33.43■■■□□ 2.94
LYRM1-201ENST00000219168 CFDP1Q9UEE9 299 aaPredicted RBP33.42■■■□□ 2.94
LYRM1-201ENST00000219168 CLSPNQ9HAW4 1339 aa33.4■■■□□ 2.94
LYRM1-201ENST00000219168 ABCC10Q5T3U5 1492 aa33.38■■■□□ 2.93
LYRM1-201ENST00000219168 HFM1A2PYH4 1435 aa33.36■■■□□ 2.93
LYRM1-201ENST00000219168 ZNF644Q9H582 1327 aaPredicted RBP33.35■■■□□ 2.93
LYRM1-201ENST00000219168 ZCCHC11Q5TAX3 1644 aaKnown RBP33.31■■■□□ 2.92
LYRM1-201ENST00000219168 CAMSAP2Q08AD1 1489 aa33.31■■■□□ 2.92
LYRM1-201ENST00000219168 CHIC2Q9UKJ5 165 aa33.31■■■□□ 2.92
LYRM1-201ENST00000219168 KDM5BQ9UGL1 1544 aa33.3■■■□□ 2.92
LYRM1-201ENST00000219168 CDC42BPAQ5VT25 1732 aa33.3■■■□□ 2.92
LYRM1-201ENST00000219168 ZNF777Q9ULD5 760 aaPredicted RBP33.29■■■□□ 2.92
LYRM1-201ENST00000219168 DAPK1P53355 1430 aa33.29■■■□□ 2.92
LYRM1-201ENST00000219168 DNMT1P26358 1616 aaKnown RBP33.29■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms