RNA–Protein interactions for RNA: ENST00000055077.7

RFC2-201, Transcript of replication factor C subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC2, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-201ENST00000055077 VPS8Q8N3P4 1428 aa36.73■■■■□ 3.47
RFC2-201ENST00000055077 ARAP1Q96P48 1450 aa36.73■■■■□ 3.47
RFC2-201ENST00000055077 GRIN2AQ12879 1464 aa36.72■■■■□ 3.47
RFC2-201ENST00000055077 EFCAB5A4FU69 1503 aa36.65■■■■□ 3.46
RFC2-201ENST00000055077 IQGAP2Q13576 1575 aa36.58■■■■□ 3.45
RFC2-201ENST00000055077 CHMP7Q8WUX9 453 aaPredicted RBP36.58■■■■□ 3.45
RFC2-201ENST00000055077 SAMD9Q5K651 1589 aa36.52■■■■□ 3.44
RFC2-201ENST00000055077 KIAA0586Q9BVV6 1533 aa36.51■■■■□ 3.44
RFC2-201ENST00000055077 CEP170Q5SW79 1584 aa36.48■■■■□ 3.43
RFC2-201ENST00000055077 FBLN2P98095 1184 aa36.47■■■■□ 3.43
RFC2-201ENST00000055077 NUP160Q12769 1436 aa36.46■■■■□ 3.43
RFC2-201ENST00000055077 FHOD3Q2V2M9 1422 aa36.41■■■■□ 3.42
RFC2-201ENST00000055077 UGGT2Q9NYU1 1516 aa36.4■■■■□ 3.42
RFC2-201ENST00000055077 CHD1O14646 1710 aa36.38■■■■□ 3.41
RFC2-201ENST00000055077 P3H3Q8IVL6 736 aa36.35■■■■□ 3.41
RFC2-201ENST00000055077 APLP2Q06481 763 aa36.3■■■■□ 3.4
RFC2-201ENST00000055077 PPARGC1BQ86YN6 1023 aaKnown RBP36.29■■■■□ 3.4
RFC2-201ENST00000055077 FMN1Q68DA7 1419 aa36.29■■■■□ 3.4
RFC2-201ENST00000055077 TRIM26Q12899 539 aaPredicted RBP36.28■■■■□ 3.4
RFC2-201ENST00000055077 PCF11O94913 1555 aaKnown RBP36.26■■■■□ 3.39
RFC2-201ENST00000055077 KIAA0556O60303 1618 aa36.22■■■■□ 3.39
RFC2-201ENST00000055077 FYCO1Q9BQS8 1478 aa36.2■■■■□ 3.39
RFC2-201ENST00000055077 DISP1Q96F81 1524 aa36.2■■■■□ 3.39
RFC2-201ENST00000055077 CASKIN1Q8WXD9 1431 aa36.18■■■■□ 3.38
RFC2-201ENST00000055077 PCGF6Q9BYE7 350 aa36.17■■■■□ 3.38
RFC2-201ENST00000055077 MAP3K1Q13233 1512 aa36.14■■■■□ 3.38
RFC2-201ENST00000055077 JPH4Q96JJ6 628 aa36.1■■■■□ 3.37
RFC2-201ENST00000055077 TIAM1Q13009 1591 aa36.09■■■■□ 3.37
RFC2-201ENST00000055077 TTBK1Q5TCY1 1321 aaPredicted RBP36.07■■■■□ 3.37
RFC2-201ENST00000055077 CFAP43Q8NDM7 1665 aa36.06■■■■□ 3.36
RFC2-201ENST00000055077 CARMIL2Q6F5E8 1435 aa36.06■■■■□ 3.36
RFC2-201ENST00000055077 SHROOM2Q13796 1616 aa36■■■■□ 3.35
RFC2-201ENST00000055077 CLASP1Q7Z460 1538 aa35.98■■■■□ 3.35
RFC2-201ENST00000055077 HECW1Q76N89 1606 aa35.96■■■■□ 3.35
RFC2-201ENST00000055077 ATP1B4Q9UN42 357 aaPredicted RBP35.96■■■■□ 3.35
RFC2-201ENST00000055077 KANK4Q5T7N3 995 aaPredicted RBP35.95■■■■□ 3.35
RFC2-201ENST00000055077 PRG4Q92954 1404 aaPredicted RBP35.91■■■■□ 3.34
RFC2-201ENST00000055077 LRRIQ1Q96JM4 1722 aa35.9■■■■□ 3.34
RFC2-201ENST00000055077 LRRC9Q6ZRR7 1453 aa35.9■■■■□ 3.34
RFC2-201ENST00000055077 CCDC18Q5T9S5 1454 aa35.87■■■■□ 3.33
RFC2-201ENST00000055077 RAPGEF6Q8TEU7 1601 aa35.84■■■■□ 3.33
RFC2-201ENST00000055077 EPRSP07814 1512 aaKnown RBP35.78■■■■□ 3.32
RFC2-201ENST00000055077 NUP153P49790 1475 aaKnown RBP35.73■■■■□ 3.31
RFC2-201ENST00000055077 PLB1Q6P1J6 1458 aa35.72■■■■□ 3.31
RFC2-201ENST00000055077 ABCA8O94911 1581 aa35.69■■■■□ 3.3
RFC2-201ENST00000055077 ERCC6L2Q5T890 1561 aa35.68■■■■□ 3.3
RFC2-201ENST00000055077 CDK13Q14004 1512 aaKnown RBP35.68■■■■□ 3.3
RFC2-201ENST00000055077 EHBP1L1Q8N3D4 1523 aa35.68■■■■□ 3.3
RFC2-201ENST00000055077 PTPRGP23470 1445 aa35.67■■■■□ 3.3
RFC2-201ENST00000055077 MTUS2Q5JR59 1369 aa35.67■■■■□ 3.3
RFC2-201ENST00000055077 OSCARQ8IYS5 282 aa35.61■■■■□ 3.29
RFC2-201ENST00000055077 RRBP1Q9P2E9 1410 aaKnown RBP35.6■■■■□ 3.29
RFC2-201ENST00000055077 MAGI3Q5TCQ9 1506 aa35.59■■■■□ 3.29
RFC2-201ENST00000055077 SUPT6HQ7KZ85 1726 aaKnown RBP35.56■■■■□ 3.28
RFC2-201ENST00000055077 PHLDB1Q86UU1 1377 aa35.54■■■■□ 3.28
RFC2-201ENST00000055077 ARID3CA6NKF2 412 aa35.52■■■■□ 3.28
RFC2-201ENST00000055077 UACAQ9BZF9 1416 aa35.5■■■■□ 3.27
RFC2-201ENST00000055077 CCNB3Q8WWL7 1395 aa35.48■■■■□ 3.27
RFC2-201ENST00000055077 NCOA2Q15596 1464 aa35.48■■■■□ 3.27
RFC2-201ENST00000055077 ARHGEF11O15085 1522 aa35.45■■■■□ 3.27
RFC2-201ENST00000055077 CDK11AQ9UQ88 783 aaPredicted RBP35.45■■■■□ 3.27
RFC2-201ENST00000055077 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.43■■■■□ 3.26
RFC2-201ENST00000055077 HNRNPUL2Q1KMD3 747 aaKnown RBP35.43■■■■□ 3.26
RFC2-201ENST00000055077 ABCC2Q92887 1545 aa35.42■■■■□ 3.26
RFC2-201ENST00000055077 ATP10BO94823 1461 aa35.41■■■■□ 3.26
RFC2-201ENST00000055077 TROQ12816 1431 aaPredicted RBP35.37■■■■□ 3.25
RFC2-201ENST00000055077 MYOM3Q5VTT5 1437 aa35.34■■■■□ 3.25
RFC2-201ENST00000055077 UHRF1BP1LA0JNW5 1464 aa35.34■■■■□ 3.25
RFC2-201ENST00000055077 FGD6Q6ZV73 1430 aa35.33■■■■□ 3.25
RFC2-201ENST00000055077 ADCY10Q96PN6 1610 aa35.31■■■■□ 3.24
RFC2-201ENST00000055077 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.26■■■■□ 3.24
RFC2-201ENST00000055077 PLEKHD1A6NEE1 506 aa35.24■■■■□ 3.23
RFC2-201ENST00000055077 KIF14Q15058 1648 aa35.2■■■■□ 3.23
RFC2-201ENST00000055077 KDM5BQ9UGL1 1544 aa35.19■■■■□ 3.22
RFC2-201ENST00000055077 FAM50AQ14320 339 aaKnown RBP35.18■■■■□ 3.22
RFC2-201ENST00000055077 ZCCHC11Q5TAX3 1644 aaKnown RBP35.17■■■■□ 3.22
RFC2-201ENST00000055077 MIA2Q96PC5 1412 aa35.17■■■■□ 3.22
RFC2-201ENST00000055077 PTPN23Q9H3S7 1636 aa35.17■■■■□ 3.22
RFC2-201ENST00000055077 ITSN2Q9NZM3 1697 aa35.12■■■■□ 3.21
RFC2-201ENST00000055077 TCOF1Q13428 1488 aaKnown RBP35.12■■■■□ 3.21
RFC2-201ENST00000055077 ABCC10Q5T3U5 1492 aa35.07■■■■□ 3.2
RFC2-201ENST00000055077 ITGAEP38570 1179 aa35.06■■■■□ 3.2
RFC2-201ENST00000055077 GPATCH8Q9UKJ3 1502 aaKnown RBP35.03■■■■□ 3.2
RFC2-201ENST00000055077 HRCP23327 699 aa35.03■■■■□ 3.2
RFC2-201ENST00000055077 CDC42BPAQ5VT25 1732 aa34.98■■■■□ 3.19
RFC2-201ENST00000055077 CFDP1Q9UEE9 299 aaPredicted RBP34.92■■■■□ 3.18
RFC2-201ENST00000055077 RIMBP3CA6NJZ7 1639 aa34.91■■■■□ 3.18
RFC2-201ENST00000055077 RIMBP3BA6NNM3 1639 aa34.91■■■■□ 3.18
RFC2-201ENST00000055077 RIMBP3Q9UFD9 1639 aa34.91■■■■□ 3.18
RFC2-201ENST00000055077 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.9■■■■□ 3.18
RFC2-201ENST00000055077 TTC37Q6PGP7 1564 aa34.9■■■■□ 3.18
RFC2-201ENST00000055077 CAMSAP2Q08AD1 1489 aa34.89■■■■□ 3.18
RFC2-201ENST00000055077 PREX2Q70Z35 1606 aa34.89■■■■□ 3.18
RFC2-201ENST00000055077 WDR7Q9Y4E6 1490 aa34.87■■■■□ 3.17
RFC2-201ENST00000055077 PTPRKQ15262 1439 aa34.86■■■■□ 3.17
RFC2-201ENST00000055077 CCER1Q8TC90 406 aaPredicted RBP34.86■■■■□ 3.17
RFC2-201ENST00000055077 DNMT1P26358 1616 aaKnown RBP34.84■■■■□ 3.17
RFC2-201ENST00000055077 SETD5Q9C0A6 1442 aa34.81■■■■□ 3.16
RFC2-201ENST00000055077 MYO5CQ9NQX4 1742 aa34.81■■■■□ 3.16
RFC2-201ENST00000055077 CDC42BPBQ9Y5S2 1711 aa34.8■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms