RNA–Protein interactions for RNA: ENSMUST00000194038.1

Pcdha8-201, Transcript of Protocadherin alpha 8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha8, Length 5,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8-201ENSMUST00000194038 DekQ7TNV0 380 aaKnown RBP18.93■□□□□ 0.62
Pcdha8-201ENSMUST00000194038 BlmO88700 1416 aa18.9■□□□□ 0.62
Pcdha8-201ENSMUST00000194038 Hsp90ab1P11499 724 aaKnown RBP18.89■□□□□ 0.61
Pcdha8-201ENSMUST00000194038 Lmod3E9QA62 571 aa18.87■□□□□ 0.61
Pcdha8-201ENSMUST00000194038 Chic2Q9D9G3 165 aa18.87■□□□□ 0.61
Pcdha8-201ENSMUST00000194038 Bcl11aQ9QYE3 773 aa18.84■□□□□ 0.61
Pcdha8-201ENSMUST00000194038 Trim30dE9PWL0 497 aa18.84■□□□□ 0.61
Pcdha8-201ENSMUST00000194038 Htatsf1Q8BGC0 757 aa18.84■□□□□ 0.61
Pcdha8-201ENSMUST00000194038 Ofd1Q80Z25 1017 aa18.83■□□□□ 0.61
Pcdha8-201ENSMUST00000194038 Clstn2Q9ER65 966 aa18.82■□□□□ 0.6
Pcdha8-201ENSMUST00000194038 Rb1cc1Q9ESK9 1588 aa18.82■□□□□ 0.6
Pcdha8-201ENSMUST00000194038 Rangap1P46061 589 aaKnown RBP18.78■□□□□ 0.6
Pcdha8-201ENSMUST00000194038 Ifnlr1Q8CGK5 535 aa18.78■□□□□ 0.6
Pcdha8-201ENSMUST00000194038 Vsig10D3YX43 558 aa18.76■□□□□ 0.59
Pcdha8-201ENSMUST00000194038 Gm13695A2AK44 830 aa18.76■□□□□ 0.59
Pcdha8-201ENSMUST00000194038 Ppm1gQ61074 542 aa18.76■□□□□ 0.59
Pcdha8-201ENSMUST00000194038 Setd5Q5XJV7 1441 aa18.75■□□□□ 0.59
Pcdha8-201ENSMUST00000194038 Fkbp15Q6P9Q6 1216 aaKnown RBP18.72■□□□□ 0.59
Pcdha8-201ENSMUST00000194038 Irx3P81067 507 aa18.72■□□□□ 0.59
Pcdha8-201ENSMUST00000194038 P3h3Q8CG70 732 aa18.71■□□□□ 0.59
Pcdha8-201ENSMUST00000194038 Fgd1P52734 960 aa18.7■□□□□ 0.58
Pcdha8-201ENSMUST00000194038 PtmaP26350 111 aa18.7■□□□□ 0.58
Pcdha8-201ENSMUST00000194038 Plcb2A3KGF7 1181 aa18.64■□□□□ 0.58
Pcdha8-201ENSMUST00000194038 Rgl3Q3UYI5 709 aa18.64■□□□□ 0.57
Pcdha8-201ENSMUST00000194038 Cwc22Q8C5N3 908 aaKnown RBP18.64■□□□□ 0.57
Pcdha8-201ENSMUST00000194038 SafbD3YXK2 937 aaKnown RBP18.6■□□□□ 0.57
Pcdha8-201ENSMUST00000194038 Trim26Q99PN3 545 aa18.6■□□□□ 0.57
Pcdha8-201ENSMUST00000194038 Golga3P55937 1487 aa18.58■□□□□ 0.57
Pcdha8-201ENSMUST00000194038 Eea1Q8BL66 1411 aa18.57■□□□□ 0.56
Pcdha8-201ENSMUST00000194038 Mbd3Q9Z2D8 285 aaKnown RBP18.54■□□□□ 0.56
Pcdha8-201ENSMUST00000194038 AU015836B2RUM3 263 aa18.54■□□□□ 0.56
Pcdha8-201ENSMUST00000194038 Card11Q8CIS0 1159 aa18.53■□□□□ 0.56
Pcdha8-201ENSMUST00000194038 Arid4bA2CG63 1314 aaKnown RBP18.52■□□□□ 0.56
Pcdha8-201ENSMUST00000194038 Tcerg1Q8CGF7 1100 aaKnown RBP18.52■□□□□ 0.55
Pcdha8-201ENSMUST00000194038 Map7O88735 730 aa18.51■□□□□ 0.55
Pcdha8-201ENSMUST00000194038 Adam1bQ8R534 806 aa18.49■□□□□ 0.55
Pcdha8-201ENSMUST00000194038 Apbb1Q9QXJ1 710 aa18.48■□□□□ 0.55
Pcdha8-201ENSMUST00000194038 Chmp4bQ9D8B3 224 aaKnown RBP18.47■□□□□ 0.55
Pcdha8-201ENSMUST00000194038 Ubl4bQ9CQ84 188 aa18.47■□□□□ 0.55
Pcdha8-201ENSMUST00000194038 Mia2Q91ZV0 1396 aa18.47■□□□□ 0.55
Pcdha8-201ENSMUST00000194038 Dbr1Q923B1 550 aa18.43■□□□□ 0.54
Pcdha8-201ENSMUST00000194038 Grwd1Q810D6 446 aaKnown RBP18.42■□□□□ 0.54
Pcdha8-201ENSMUST00000194038 B4galnt3Q6L8S8 986 aa18.4■□□□□ 0.54
Pcdha8-201ENSMUST00000194038 Neurod2Q62414 383 aa18.4■□□□□ 0.54
Pcdha8-201ENSMUST00000194038 Casc1Q6TDU8 730 aa18.4■□□□□ 0.54
Pcdha8-201ENSMUST00000194038 Baz1aO88379 1555 aa18.39■□□□□ 0.53
Pcdha8-201ENSMUST00000194038 Ipo9Q91YE6 1041 aa18.39■□□□□ 0.53
Pcdha8-201ENSMUST00000194038 Supt16hQ920B9 1047 aa18.38■□□□□ 0.53
Pcdha8-201ENSMUST00000194038 Mapk8ip3Q9ESN9 1337 aa18.38■□□□□ 0.53
Pcdha8-201ENSMUST00000194038 Dnttip2Q8R2M2 758 aaKnown RBP18.38■□□□□ 0.53
Pcdha8-201ENSMUST00000194038 Spryd3E9Q9B3 442 aa18.37■□□□□ 0.53
Pcdha8-201ENSMUST00000194038 Tnnt2P50752 301 aa18.37■□□□□ 0.53
Pcdha8-201ENSMUST00000194038 Rwdd1Q9CQK7 243 aa18.37■□□□□ 0.53
Pcdha8-201ENSMUST00000194038 Dnai1Q8C0M8 701 aa18.36■□□□□ 0.53
Pcdha8-201ENSMUST00000194038 IqubQ8CDK3 788 aa18.36■□□□□ 0.53
Pcdha8-201ENSMUST00000194038 Rsf1E9PWW9 1441 aaKnown RBP18.35■□□□□ 0.53
Pcdha8-201ENSMUST00000194038 Slc4a3P16283 1227 aa18.35■□□□□ 0.53
Pcdha8-201ENSMUST00000194038 KnstrnQ9D9Z1 312 aaKnown RBP18.34■□□□□ 0.53
Pcdha8-201ENSMUST00000194038 Mroh3A0A1D5RM54 893 aa18.33■□□□□ 0.53
Pcdha8-201ENSMUST00000194038 Srpk2O54781 681 aaKnown RBP18.33■□□□□ 0.52
Pcdha8-201ENSMUST00000194038 Kdm2aP59997 1161 aa18.32■□□□□ 0.52
Pcdha8-201ENSMUST00000194038 NudcO35685 332 aaKnown RBP18.32■□□□□ 0.52
Pcdha8-201ENSMUST00000194038 Wwc2Q6NXJ0 1187 aa18.32■□□□□ 0.52
Pcdha8-201ENSMUST00000194038 Chmp5Q9D7S9 219 aa18.3■□□□□ 0.52
Pcdha8-201ENSMUST00000194038 PtmsQ9D0J8 101 aaKnown RBP18.29■□□□□ 0.52
Pcdha8-201ENSMUST00000194038 EspnQ9ET47 871 aa18.29■□□□□ 0.52
Pcdha8-201ENSMUST00000194038 Hspa5P20029 655 aaKnown RBP18.28■□□□□ 0.52
Pcdha8-201ENSMUST00000194038 Mtus2Q3UHD3 1353 aa18.28■□□□□ 0.52
Pcdha8-201ENSMUST00000194038 NacadQ5SWP3 1504 aa18.27■□□□□ 0.52
Pcdha8-201ENSMUST00000194038 Gm20521D3Z5F7 333 aa18.27■□□□□ 0.52
Pcdha8-201ENSMUST00000194038 Armcx1Q9CX83 456 aa18.27■□□□□ 0.52
Pcdha8-201ENSMUST00000194038 Erich6bQ9D4S6 220 aa18.27■□□□□ 0.52
Pcdha8-201ENSMUST00000194038 Exosc9Q9JHI7 438 aaKnown RBP18.25■□□□□ 0.51
Pcdha8-201ENSMUST00000194038 Gm6268A2A3U9 297 aa18.23■□□□□ 0.51
Pcdha8-201ENSMUST00000194038 Kif15Q6P9L6 1387 aa18.23■□□□□ 0.51
Pcdha8-201ENSMUST00000194038 PnnO35691 725 aaKnown RBP18.22■□□□□ 0.51
Pcdha8-201ENSMUST00000194038 MccE9PWI3 1003 aa18.22■□□□□ 0.51
Pcdha8-201ENSMUST00000194038 MsnP26041 577 aaKnown RBP18.21■□□□□ 0.51
Pcdha8-201ENSMUST00000194038 Ccdc18Q640L5 1455 aa18.21■□□□□ 0.51
Pcdha8-201ENSMUST00000194038 Rrp12Q6P5B0 1295 aaKnown RBP18.2■□□□□ 0.5
Pcdha8-201ENSMUST00000194038 Exoc6Q8R313 802 aa18.2■□□□□ 0.5
Pcdha8-201ENSMUST00000194038 Iqcf3Q9D498 203 aa18.19■□□□□ 0.5
Pcdha8-201ENSMUST00000194038 Zfp777B9EKF4 885 aa18.19■□□□□ 0.5
Pcdha8-201ENSMUST00000194038 HnrnpuQ8VEK3 800 aaKnown RBP18.19■□□□□ 0.5
Pcdha8-201ENSMUST00000194038 Hsp90b1P08113 802 aaKnown RBP18.18■□□□□ 0.5
Pcdha8-201ENSMUST00000194038 Ipo8Q7TMY7 1010 aa18.17■□□□□ 0.5
Pcdha8-201ENSMUST00000194038 Gm973E9Q295 1059 aa18.16■□□□□ 0.5
Pcdha8-201ENSMUST00000194038 Irx6Q9ER75 438 aa18.16■□□□□ 0.5
Pcdha8-201ENSMUST00000194038 Zscan21Q07231 555 aa18.15■□□□□ 0.5
Pcdha8-201ENSMUST00000194038 Mak16Q8BGS0 296 aaKnown RBP18.15■□□□□ 0.5
Pcdha8-201ENSMUST00000194038 4933402E13RikQ9D4D2 429 aa18.15■□□□□ 0.5
Pcdha8-201ENSMUST00000194038 Calcoco2A2A6M5 331 aa18.15■□□□□ 0.5
Pcdha8-201ENSMUST00000194038 Fhad1A6PWD2 1420 aa18.14■□□□□ 0.5
Pcdha8-201ENSMUST00000194038 Pes1Q9EQ61 584 aaKnown RBP18.13■□□□□ 0.49
Pcdha8-201ENSMUST00000194038 Gtf3c3Q3TMP1 882 aa18.13■□□□□ 0.49
Pcdha8-201ENSMUST00000194038 Rundc1Q0VDN7 615 aa18.11■□□□□ 0.49
Pcdha8-201ENSMUST00000194038 Speer4f1Q9D5Q6 258 aa18.11■□□□□ 0.49
Pcdha8-201ENSMUST00000194038 Rrp7aQ9D1C9 280 aaKnown RBP18.11■□□□□ 0.49
Pcdha8-201ENSMUST00000194038 Pkd2O35245 966 aa18.1■□□□□ 0.49
Pcdha8-201ENSMUST00000194038 Znf326O88291 580 aa18.09■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 54.8 ms