RNA–Protein interactions for RNA: ENSMUST00000194038.1

Pcdha8-201, Transcript of Protocadherin alpha 8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha8, Length 5,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8-201ENSMUST00000194038 Rhox8Q6VSS7 320 aa24.83■■□□□ 1.56
Pcdha8-201ENSMUST00000194038 Rpgrip1Q9EPQ2 1331 aa23.8■■□□□ 1.4
Pcdha8-201ENSMUST00000194038 Las1lA2BE28 776 aaKnown RBP22.91■■□□□ 1.26
Pcdha8-201ENSMUST00000194038 Cngb1E1AZ71 1325 aa22.82■■□□□ 1.24
Pcdha8-201ENSMUST00000194038 Ehmt2Q9Z148 1263 aaKnown RBP22.65■■□□□ 1.22
Pcdha8-201ENSMUST00000194038 Pelp1Q9DBD5 1123 aaKnown RBP22.29■■□□□ 1.16
Pcdha8-201ENSMUST00000194038 Wdr66E9Q743 1299 aa22.23■■□□□ 1.15
Pcdha8-201ENSMUST00000194038 Zeb1Q64318 1117 aa22.02■■□□□ 1.12
Pcdha8-201ENSMUST00000194038 Ccdc136Q3TVA9 1136 aa21.93■■□□□ 1.1
Pcdha8-201ENSMUST00000194038 Acin1Q9JIX8 1338 aaKnown RBP21.8■■□□□ 1.08
Pcdha8-201ENSMUST00000194038 CenpbP27790 599 aa21.76■■□□□ 1.07
Pcdha8-201ENSMUST00000194038 Esf1Q3V1V3 845 aaKnown RBP21.69■■□□□ 1.06
Pcdha8-201ENSMUST00000194038 Gab3Q8BSM5 595 aa21.63■■□□□ 1.05
Pcdha8-201ENSMUST00000194038 Trim41Q5NCC3 630 aa21.63■■□□□ 1.05
Pcdha8-201ENSMUST00000194038 Ube2uB1AUC4 352 aa21.58■■□□□ 1.05
Pcdha8-201ENSMUST00000194038 NefmP08553 848 aa21.52■■□□□ 1.04
Pcdha8-201ENSMUST00000194038 Npm2Q80W85 207 aa21.38■■□□□ 1.01
Pcdha8-201ENSMUST00000194038 Amer1Q7TS75 1132 aa21.34■■□□□ 1.01
Pcdha8-201ENSMUST00000194038 Stra8P70278 393 aa21.33■■□□□ 1.01
Pcdha8-201ENSMUST00000194038 NischQ80TM9 1593 aa21.32■■□□□ 1
Pcdha8-201ENSMUST00000194038 Myt1Q8CFC2 1127 aa21.27■■□□□ 1
Pcdha8-201ENSMUST00000194038 Myt1lP97500 1187 aa21.23■□□□□ 0.99
Pcdha8-201ENSMUST00000194038 Ccdc180J3QNE4 1664 aa21.13■□□□□ 0.97
Pcdha8-201ENSMUST00000194038 Pcgf6Q99NA9 353 aa21.11■□□□□ 0.97
Pcdha8-201ENSMUST00000194038 Cdk11bP24788 784 aaKnown RBP21.06■□□□□ 0.96
Pcdha8-201ENSMUST00000194038 UbtfP25976 765 aaKnown RBP21.05■□□□□ 0.96
Pcdha8-201ENSMUST00000194038 HrcG5E8J6 738 aa21.02■□□□□ 0.96
Pcdha8-201ENSMUST00000194038 Tnnt3Q9QZ47 272 aa20.88■□□□□ 0.93
Pcdha8-201ENSMUST00000194038 Slc24a1Q91WD8 1130 aa20.85■□□□□ 0.93
Pcdha8-201ENSMUST00000194038 Rtl1Q7M732 1744 aa20.83■□□□□ 0.92
Pcdha8-201ENSMUST00000194038 Nop58Q6DFW4 536 aaKnown RBP20.77■□□□□ 0.92
Pcdha8-201ENSMUST00000194038 Ttbk1Q6PCN3 1308 aa20.66■□□□□ 0.9
Pcdha8-201ENSMUST00000194038 4930567H17RikQ3V0K5 233 aa20.62■□□□□ 0.89
Pcdha8-201ENSMUST00000194038 4933416C03RikQ3V063 378 aa20.61■□□□□ 0.89
Pcdha8-201ENSMUST00000194038 Supt5hO55201 1082 aaKnown RBP20.6■□□□□ 0.89
Pcdha8-201ENSMUST00000194038 Rtl5Q5DTT4 599 aa20.55■□□□□ 0.88
Pcdha8-201ENSMUST00000194038 NrdcQ8BHG1 1161 aa20.55■□□□□ 0.88
Pcdha8-201ENSMUST00000194038 Anp32bQ9EST5 272 aaKnown RBP20.46■□□□□ 0.87
Pcdha8-201ENSMUST00000194038 NeflP08551 543 aa20.44■□□□□ 0.86
Pcdha8-201ENSMUST00000194038 NclP09405 707 aaKnown RBP20.42■□□□□ 0.86
Pcdha8-201ENSMUST00000194038 TonslQ6NZL6 1363 aa20.37■□□□□ 0.85
Pcdha8-201ENSMUST00000194038 Eif5bQ05D44 1216 aaKnown RBP20.32■□□□□ 0.84
Pcdha8-201ENSMUST00000194038 Fam50aQ9WV03 339 aaKnown RBP20.29■□□□□ 0.84
Pcdha8-201ENSMUST00000194038 Ppargc1bQ8VHJ7 1014 aa20.27■□□□□ 0.83
Pcdha8-201ENSMUST00000194038 DiexfQ8BTT6 772 aaKnown RBP20.23■□□□□ 0.83
Pcdha8-201ENSMUST00000194038 Mier1Q5UAK0 511 aa20.2■□□□□ 0.82
Pcdha8-201ENSMUST00000194038 Neurod1Q60867 357 aa20.17■□□□□ 0.82
Pcdha8-201ENSMUST00000194038 Il27Q8K3I6 234 aa20.17■□□□□ 0.82
Pcdha8-201ENSMUST00000194038 ClspnQ80YR7 1315 aa20.14■□□□□ 0.81
Pcdha8-201ENSMUST00000194038 Anp32aO35381 247 aa20.13■□□□□ 0.81
Pcdha8-201ENSMUST00000194038 Ap3b1Q9Z1T1 1105 aa20.11■□□□□ 0.81
Pcdha8-201ENSMUST00000194038 Zcchc6Q5BLK4 1491 aaKnown RBP20.05■□□□□ 0.8
Pcdha8-201ENSMUST00000194038 Anks4bQ8K3X6 423 aa19.93■□□□□ 0.78
Pcdha8-201ENSMUST00000194038 Os9Q8K2C7 672 aa19.89■□□□□ 0.78
Pcdha8-201ENSMUST00000194038 DaxxO35613 739 aa19.85■□□□□ 0.77
Pcdha8-201ENSMUST00000194038 Aplp2Q06335 707 aa19.85■□□□□ 0.77
Pcdha8-201ENSMUST00000194038 Abcc9P70170 1546 aa19.81■□□□□ 0.76
Pcdha8-201ENSMUST00000194038 Dcaf1Q80TR8 1506 aa19.77■□□□□ 0.75
Pcdha8-201ENSMUST00000194038 Csrnp3P59055 597 aa19.77■□□□□ 0.75
Pcdha8-201ENSMUST00000194038 Sall2Q9QX96 1004 aa19.74■□□□□ 0.75
Pcdha8-201ENSMUST00000194038 Plekhg3Q4VAC9 1341 aa19.66■□□□□ 0.74
Pcdha8-201ENSMUST00000194038 Gm38655A0A286YDK6 273 aa19.64■□□□□ 0.73
Pcdha8-201ENSMUST00000194038 Lmod2Q3UHZ5 550 aa19.54■□□□□ 0.72
Pcdha8-201ENSMUST00000194038 Calr4Q3TQS0 420 aa19.5■□□□□ 0.71
Pcdha8-201ENSMUST00000194038 Cep164Q5DU05 1446 aa19.5■□□□□ 0.71
Pcdha8-201ENSMUST00000194038 Mapk8ip2Q9ERE9 830 aa19.48■□□□□ 0.71
Pcdha8-201ENSMUST00000194038 Ccdc9Q8VC31 543 aaKnown RBP19.44■□□□□ 0.7
Pcdha8-201ENSMUST00000194038 Eid3Q3V124 375 aa19.44■□□□□ 0.7
Pcdha8-201ENSMUST00000194038 Ccer2J3QPU5 274 aa19.42■□□□□ 0.7
Pcdha8-201ENSMUST00000194038 Ppp4r2Q0VGB7 417 aa19.42■□□□□ 0.7
Pcdha8-201ENSMUST00000194038 Nlrp6Q91WS2 869 aa19.41■□□□□ 0.7
Pcdha8-201ENSMUST00000194038 Clip1Q922J3 1391 aa19.37■□□□□ 0.69
Pcdha8-201ENSMUST00000194038 Upf2A2AT37 1269 aaKnown RBP19.37■□□□□ 0.69
Pcdha8-201ENSMUST00000194038 Wdr43Q6ZQL4 677 aaKnown RBP19.35■□□□□ 0.69
Pcdha8-201ENSMUST00000194038 Zbtb7cQ8VCZ7 619 aa19.33■□□□□ 0.69
Pcdha8-201ENSMUST00000194038 Npm1Q61937 292 aaKnown RBP19.32■□□□□ 0.68
Pcdha8-201ENSMUST00000194038 Gm35339A0A140LHH9 1649 aa19.31■□□□□ 0.68
Pcdha8-201ENSMUST00000194038 Hnrnpul2Q00PI9 745 aaKnown RBP19.31■□□□□ 0.68
Pcdha8-201ENSMUST00000194038 Hdac5Q9Z2V6 1113 aa19.29■□□□□ 0.68
Pcdha8-201ENSMUST00000194038 Hsp90aa1P07901 733 aaKnown RBP19.29■□□□□ 0.68
Pcdha8-201ENSMUST00000194038 ArxO35085 564 aa19.26■□□□□ 0.67
Pcdha8-201ENSMUST00000194038 Polr3glQ8R0C0 218 aa19.26■□□□□ 0.67
Pcdha8-201ENSMUST00000194038 Brd4Q9ESU6 1400 aaKnown RBP19.26■□□□□ 0.67
Pcdha8-201ENSMUST00000194038 1700123L14RikQ3V2K7 440 aa19.25■□□□□ 0.67
Pcdha8-201ENSMUST00000194038 Zbtb4Q5F293 982 aa19.24■□□□□ 0.67
Pcdha8-201ENSMUST00000194038 Abcc8B2RUS7 1588 aa19.23■□□□□ 0.67
Pcdha8-201ENSMUST00000194038 Chic1Q8CBW7 227 aa19.19■□□□□ 0.66
Pcdha8-201ENSMUST00000194038 Mrs2Q5NCE8 434 aa19.15■□□□□ 0.66
Pcdha8-201ENSMUST00000194038 Erich6D3Z6S9 713 aa19.12■□□□□ 0.65
Pcdha8-201ENSMUST00000194038 Fam71e1A1L3C1 212 aa19.1■□□□□ 0.65
Pcdha8-201ENSMUST00000194038 Prdm10Q3UTQ7 1184 aa19.04■□□□□ 0.64
Pcdha8-201ENSMUST00000194038 Ythdc1E9Q5K9 736 aaKnown RBP19.04■□□□□ 0.64
Pcdha8-201ENSMUST00000194038 Gm13697A2AK42 830 aa19.02■□□□□ 0.63
Pcdha8-201ENSMUST00000194038 Rad21Q61550 635 aaKnown RBP19.01■□□□□ 0.63
Pcdha8-201ENSMUST00000194038 CatipB9EKE5 520 aa19.01■□□□□ 0.63
Pcdha8-201ENSMUST00000194038 Atp1b4Q99ME6 356 aa18.99■□□□□ 0.63
Pcdha8-201ENSMUST00000194038 CanxP35564 591 aaKnown RBP18.98■□□□□ 0.63
Pcdha8-201ENSMUST00000194038 Ccdc27Q3V036 639 aa18.98■□□□□ 0.63
Pcdha8-201ENSMUST00000194038 Trim44Q9QXA7 346 aa18.98■□□□□ 0.63
Pcdha8-201ENSMUST00000194038 Aebp2Q9Z248 504 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 46.8 ms